RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 PF4P02776 101 aa11.59□□□□□ -0.55
COL9A1-204ENST00000370496 OR5AC1P0C628 307 aa11.59□□□□□ -0.55
COL9A1-204ENST00000370496 TPPP2P59282 170 aa11.59□□□□□ -0.55
COL9A1-204ENST00000370496 OR2B8PP59922 312 aa11.59□□□□□ -0.55
COL9A1-204ENST00000370496 SP6Q3SY56 376 aa11.59□□□□□ -0.55
COL9A1-204ENST00000370496 TREML4Q6UXN2 200 aa11.59□□□□□ -0.55
COL9A1-204ENST00000370496 H2BFWTQ7Z2G1 175 aa11.59□□□□□ -0.55
COL9A1-204ENST00000370496 ZNF695Q8IW36 515 aa11.59□□□□□ -0.55
COL9A1-204ENST00000370496 SGPP2Q8IWX5 399 aa11.59□□□□□ -0.55
COL9A1-204ENST00000370496 TMEM68Q96MH6 324 aa11.59□□□□□ -0.55
COL9A1-204ENST00000370496 WDR12Q9GZL7 423 aaKnown RBP11.59□□□□□ -0.55
COL9A1-204ENST00000370496 COA4Q9NYJ1 87 aa11.59□□□□□ -0.55
COL9A1-204ENST00000370496 TNCP24821 2201 aa11.58□□□□□ -0.56
COL9A1-204ENST00000370496 TRAV3A0A0B4J244 114 aa11.58□□□□□ -0.56
COL9A1-204ENST00000370496 AKR1C4P17516 323 aa11.58□□□□□ -0.56
COL9A1-204ENST00000370496 RBMS2Q15434 407 aaKnown RBP11.58□□□□□ -0.56
COL9A1-204ENST00000370496 ASPHD1Q5U4P2 390 aa11.58□□□□□ -0.56
COL9A1-204ENST00000370496 C18orf65Q6ZTR6 163 aa11.58□□□□□ -0.56
COL9A1-204ENST00000370496 C8orf86Q6ZUL3 223 aa11.58□□□□□ -0.56
COL9A1-204ENST00000370496 ADAD2Q8NCV1 583 aaKnown RBP11.58□□□□□ -0.56
COL9A1-204ENST00000370496 OR5T1Q8NG75 326 aa11.58□□□□□ -0.56
COL9A1-204ENST00000370496 MS4A10Q96PG2 267 aa11.58□□□□□ -0.56
COL9A1-204ENST00000370496 TSC22D3Q99576 134 aa11.58□□□□□ -0.56
COL9A1-204ENST00000370496 SLC25A21Q9BQT8 299 aaPredicted RBP11.58□□□□□ -0.56
COL9A1-204ENST00000370496 C7orf50Q9BRJ6 194 aaKnown RBP11.58□□□□□ -0.56
COL9A1-204ENST00000370496 KLK15Q9H2R5 256 aa11.58□□□□□ -0.56
COL9A1-204ENST00000370496 RBMXL2O75526 392 aaKnown RBP11.57□□□□□ -0.56
COL9A1-204ENST00000370496 IGKV1-39P01597 117 aa11.57□□□□□ -0.56
COL9A1-204ENST00000370496 TRGV3P03979 118 aa11.57□□□□□ -0.56
COL9A1-204ENST00000370496 IGKV1D-39P04432 117 aa11.57□□□□□ -0.56
COL9A1-204ENST00000370496 FGF2P09038 288 aa11.57□□□□□ -0.56
COL9A1-204ENST00000370496 OR9G9P0C7N8 305 aa11.57□□□□□ -0.56
COL9A1-204ENST00000370496 MYOD1P15172 320 aa11.57□□□□□ -0.56
COL9A1-204ENST00000370496 UCP1P25874 307 aa11.57□□□□□ -0.56
COL9A1-204ENST00000370496 SLC6A1P30531 599 aa11.57□□□□□ -0.56
COL9A1-204ENST00000370496 RAB9AP51151 201 aa11.57□□□□□ -0.56
COL9A1-204ENST00000370496 CCR6P51684 374 aa11.57□□□□□ -0.56
COL9A1-204ENST00000370496 ZNF846Q147U1 533 aa11.57□□□□□ -0.56
COL9A1-204ENST00000370496 SEC22AQ96IW7 307 aa11.57□□□□□ -0.56
COL9A1-204ENST00000370496 TMEM222Q9H0R3 208 aa11.57□□□□□ -0.56
COL9A1-204ENST00000370496 SLA2Q9H6Q3 261 aa11.57□□□□□ -0.56
COL9A1-204ENST00000370496 PRNDQ9UKY0 176 aa11.57□□□□□ -0.56
COL9A1-204ENST00000370496 NSG2Q9Y328 171 aa11.57□□□□□ -0.56
COL9A1-204ENST00000370496 TRRAPQ9Y4A5 3859 aa11.57□□□□□ -0.56
COL9A1-204ENST00000370496 HMX3A6NHT5 357 aa11.56□□□□□ -0.56
COL9A1-204ENST00000370496 C15orf61A6NNL5 157 aa11.56□□□□□ -0.56
COL9A1-204ENST00000370496 TEX22C9J3V5 150 aa11.56□□□□□ -0.56
COL9A1-204ENST00000370496 H3BUA1 57 aa11.56□□□□□ -0.56
COL9A1-204ENST00000370496 ANXA3P12429 323 aa11.56□□□□□ -0.56
COL9A1-204ENST00000370496 DHODHQ02127 395 aa11.56□□□□□ -0.56
COL9A1-204ENST00000370496 SLC25A42Q86VD7 318 aa11.56□□□□□ -0.56
COL9A1-204ENST00000370496 OR4A16Q8NH70 328 aa11.56□□□□□ -0.56
COL9A1-204ENST00000370496 MYOZ3Q8TDC0 251 aa11.56□□□□□ -0.56
COL9A1-204ENST00000370496 C4orf3Q8WVX3 66 aa11.56□□□□□ -0.56
COL9A1-204ENST00000370496 TMEM230Q96A57 120 aa11.56□□□□□ -0.56
COL9A1-204ENST00000370496 RRNAD1Q96FB5 475 aaKnown RBP11.56□□□□□ -0.56
COL9A1-204ENST00000370496 QTRT1Q9BXR0 403 aaKnown RBP11.56□□□□□ -0.56
COL9A1-204ENST00000370496 KCNIP3Q9Y2W7 256 aa11.56□□□□□ -0.56
COL9A1-204ENST00000370496 OR51B2Q9Y5P1 312 aa11.56□□□□□ -0.56
COL9A1-204ENST00000370496 IL6RP08887 468 aaPredicted RBP11.55□□□□□ -0.56
COL9A1-204ENST00000370496 CDX1P47902 265 aaPredicted RBP11.55□□□□□ -0.56
COL9A1-204ENST00000370496 DEFB136Q30KP8 78 aa11.55□□□□□ -0.56
COL9A1-204ENST00000370496 THOC7Q6I9Y2 204 aaKnown RBP11.55□□□□□ -0.56
COL9A1-204ENST00000370496 CADM3Q8N126 398 aa11.55□□□□□ -0.56
COL9A1-204ENST00000370496 CENPSQ8N2Z9 138 aa11.55□□□□□ -0.56
COL9A1-204ENST00000370496 ZNF491Q8N8L2 437 aa11.55□□□□□ -0.56
COL9A1-204ENST00000370496 RBPMSQ93062 196 aaKnown RBP11.55□□□□□ -0.56
COL9A1-204ENST00000370496 UBE2E2Q96LR5 201 aa11.55□□□□□ -0.56
COL9A1-204ENST00000370496 OR5B12Q96R08 314 aa11.55□□□□□ -0.56
COL9A1-204ENST00000370496 HINT2Q9BX68 163 aa11.55□□□□□ -0.56
COL9A1-204ENST00000370496 GNB4Q9HAV0 340 aa11.55□□□□□ -0.56
COL9A1-204ENST00000370496 E7EUB6 86 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 LYRM1O43325 122 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 NDUFB6O95139 128 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 IGKV1-5P01602 117 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 AREGP15514 252 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 VAMP1P23763 118 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 DEFA5Q01523 94 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 TMEM268Q5VZI3 342 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 OR1L8Q8NGR8 309 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 GLYATL2Q8WU03 294 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 GALNT14Q96FL9 552 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 FKBP11Q9NYL4 201 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 ZNF257Q9Y2Q1 563 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 C13orf42A0A1B0GVH6 325 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 A0A1B0GW64 132 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 NPIPB5A8MRT5 1133 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 CDS2O95674 445 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 DHFRP00374 187 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 IGHV3-11P01762 117 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 REG1AP05451 166 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 TRAPPC2P0DI81 140 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 TRAPPC2BP0DI82 140 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 BTCP35070 178 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 MECP2P51608 486 aaKnown RBP11.54□□□□□ -0.56
COL9A1-204ENST00000370496 SRPXP78539 464 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 TMEM128Q5BJH2 165 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 TTC9CQ8N5M4 171 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 OR5B3Q8NH48 314 aa11.54□□□□□ -0.56
COL9A1-204ENST00000370496 LHFPL5Q8TAF8 219 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms