RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 GABRA6Q16445 453 aa12.67□□□□□ -0.38
PHTF1-202ENST00000369598 FBLN7Q53RD9 439 aa12.67□□□□□ -0.38
PHTF1-202ENST00000369598 PLSCR4Q9NRQ2 329 aa12.67□□□□□ -0.38
PHTF1-202ENST00000369598 CTXND1A0A1B0GTU2 59 aa12.66□□□□□ -0.38
PHTF1-202ENST00000369598 CA1P00915 261 aaPredicted RBP12.66□□□□□ -0.38
PHTF1-202ENST00000369598 IGLC2P0DOY2 106 aa12.66□□□□□ -0.38
PHTF1-202ENST00000369598 IGLC3P0DOY3 106 aa12.66□□□□□ -0.38
PHTF1-202ENST00000369598 HTD2P86397 168 aa12.66□□□□□ -0.38
PHTF1-202ENST00000369598 TBC1D28Q2M2D7 210 aa12.66□□□□□ -0.38
PHTF1-202ENST00000369598 ZNF738Q8NE65 137 aa12.66□□□□□ -0.38
PHTF1-202ENST00000369598 PINX1Q96BK5 328 aaKnown RBP12.66□□□□□ -0.38
PHTF1-202ENST00000369598 DMXL2Q8TDJ6 3036 aa12.66□□□□□ -0.38
PHTF1-202ENST00000369598 HOXC12P31275 282 aa12.66□□□□□ -0.38
PHTF1-202ENST00000369598 KLF3P57682 345 aaPredicted RBP12.66□□□□□ -0.38
PHTF1-202ENST00000369598 TCTAP57738 103 aa12.66□□□□□ -0.38
PHTF1-202ENST00000369598 MRPL49Q13405 166 aaKnown RBP12.66□□□□□ -0.38
PHTF1-202ENST00000369598 TMEM211Q6ICI0 200 aa12.66□□□□□ -0.38
PHTF1-202ENST00000369598 A0A1W2PPV4 95 aa12.65□□□□□ -0.38
PHTF1-202ENST00000369598 CDC34P49427 236 aaPredicted RBP12.65□□□□□ -0.38
PHTF1-202ENST00000369598 CLEC2AQ6UVW9 174 aa12.65□□□□□ -0.38
PHTF1-202ENST00000369598 OR10G8Q8NGN5 311 aa12.65□□□□□ -0.38
PHTF1-202ENST00000369598 SERTAD4Q9NUC0 356 aa12.65□□□□□ -0.38
PHTF1-202ENST00000369598 UQCR10Q9UDW1 63 aa12.65□□□□□ -0.38
PHTF1-202ENST00000369598 RPH3ALQ9UNE2 315 aa12.65□□□□□ -0.38
PHTF1-202ENST00000369598 PROCRQ9UNN8 238 aa12.65□□□□□ -0.38
PHTF1-202ENST00000369598 CEP295Q9C0D2 2601 aa12.65□□□□□ -0.38
PHTF1-202ENST00000369598 H0Y980 276 aa12.65□□□□□ -0.38
PHTF1-202ENST00000369598 TYMSP04818 313 aa12.65□□□□□ -0.38
PHTF1-202ENST00000369598 TBR1Q16650 682 aa12.65□□□□□ -0.38
PHTF1-202ENST00000369598 K7ENP7 123 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 RAB29O14966 203 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 C3orf79P0CE67 100 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 PRDX4Q13162 271 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 INO80CQ6PI98 192 aaPredicted RBP12.64□□□□□ -0.39
PHTF1-202ENST00000369598 C1orf174Q8IYL3 243 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 FGFRL1Q8N441 504 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 NHLRC2Q8NBF2 726 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 Q8NFD4 153 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 SSMEM1Q8WWF3 244 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 FAM234AQ9H0X4 552 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 ZNF71Q9NQZ8 489 aaPredicted RBP12.64□□□□□ -0.39
PHTF1-202ENST00000369598 ANKRD11Q6UB99 2663 aaPredicted RBP12.64□□□□□ -0.39
PHTF1-202ENST00000369598 MBD3L4A6NDZ8 208 aaPredicted RBP12.64□□□□□ -0.39
PHTF1-202ENST00000369598 MBD3L3A6NE82 208 aaPredicted RBP12.64□□□□□ -0.39
PHTF1-202ENST00000369598 MBD3L5A6NJ08 208 aaPredicted RBP12.64□□□□□ -0.39
PHTF1-202ENST00000369598 IGHV3-13P01766 116 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 IGHV3-7P01780 117 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 CELA3BP08861 270 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 TMEM11P17152 192 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 COX5AP20674 150 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 S100GP29377 79 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 SRIP30626 198 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 RANP62826 216 aaKnown RBP12.64□□□□□ -0.39
PHTF1-202ENST00000369598 LCN2P80188 198 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 DOLPP1Q86YN1 238 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 MBD3L2Q8NHZ7 208 aaPredicted RBP12.64□□□□□ -0.39
PHTF1-202ENST00000369598 PSMG3Q9BT73 122 aaPredicted RBP12.64□□□□□ -0.39
PHTF1-202ENST00000369598 DPRXA6NFQ7 191 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 SNAI2O43623 268 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 CA6P23280 308 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 CDKN1BP46527 198 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 SEM1Q6ZVN7 128 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 COX11Q9Y6N1 276 aa12.64□□□□□ -0.39
PHTF1-202ENST00000369598 GPX1P07203 203 aa12.63□□□□□ -0.39
PHTF1-202ENST00000369598 MGST1P10620 155 aaKnown RBP12.63□□□□□ -0.39
PHTF1-202ENST00000369598 PMCHL1Q16048 86 aa12.63□□□□□ -0.39
PHTF1-202ENST00000369598 LTC4SQ16873 150 aa12.63□□□□□ -0.39
PHTF1-202ENST00000369598 TMEM144Q7Z5S9 345 aa12.63□□□□□ -0.39
PHTF1-202ENST00000369598 STPG3Q8N7X2 389 aa12.63□□□□□ -0.39
PHTF1-202ENST00000369598 RNASE7Q9H1E1 156 aaKnown RBP12.63□□□□□ -0.39
PHTF1-202ENST00000369598 ARL14EPLP0DKL9 152 aa12.63□□□□□ -0.39
PHTF1-202ENST00000369598 TSPOP30536 169 aa12.63□□□□□ -0.39
PHTF1-202ENST00000369598 PAFAH1B2P68402 229 aa12.63□□□□□ -0.39
PHTF1-202ENST00000369598 PSG7Q13046 419 aa12.63□□□□□ -0.39
PHTF1-202ENST00000369598 SPATA46Q5T0L3 261 aa12.63□□□□□ -0.39
PHTF1-202ENST00000369598 PCSK4Q6UW60 755 aa12.63□□□□□ -0.39
PHTF1-202ENST00000369598 OR4B1Q8NGF8 309 aa12.63□□□□□ -0.39
PHTF1-202ENST00000369598 NAA38Q9BRA0 125 aaKnown RBP12.63□□□□□ -0.39
PHTF1-202ENST00000369598 NPCDR1Q9BY65 106 aa12.63□□□□□ -0.39
PHTF1-202ENST00000369598 MTCH1Q9NZJ7 389 aa12.63□□□□□ -0.39
PHTF1-202ENST00000369598 OR2W1Q9Y3N9 320 aa12.63□□□□□ -0.39
PHTF1-202ENST00000369598 TPRP12270 2363 aaKnown RBP12.62□□□□□ -0.39
PHTF1-202ENST00000369598 OR2T8A6NH00 312 aa12.62□□□□□ -0.39
PHTF1-202ENST00000369598 ANKRD30BLA7E2S9 258 aa12.62□□□□□ -0.39
PHTF1-202ENST00000369598 AGFG2O95081 481 aa12.62□□□□□ -0.39
PHTF1-202ENST00000369598 TFF1P04155 84 aa12.62□□□□□ -0.39
PHTF1-202ENST00000369598 ZNF83P51522 516 aa12.62□□□□□ -0.39
PHTF1-202ENST00000369598 CEACAM21Q3KPI0 293 aa12.62□□□□□ -0.39
PHTF1-202ENST00000369598 ASCL4Q6XD76 172 aa12.62□□□□□ -0.39
PHTF1-202ENST00000369598 CENPVQ7Z7K6 275 aaPredicted RBP12.62□□□□□ -0.39
PHTF1-202ENST00000369598 CXorf67Q86X51 503 aaPredicted RBP12.62□□□□□ -0.39
PHTF1-202ENST00000369598 FAM58AQ8N1B3 248 aa12.62□□□□□ -0.39
PHTF1-202ENST00000369598 OR10P1Q8NGE3 313 aa12.62□□□□□ -0.39
PHTF1-202ENST00000369598 RNF2Q99496 336 aa12.62□□□□□ -0.39
PHTF1-202ENST00000369598 BET1LQ9NYM9 111 aa12.62□□□□□ -0.39
PHTF1-202ENST00000369598 INTS1Q8N201 2190 aaKnown RBP12.62□□□□□ -0.39
PHTF1-202ENST00000369598 ACTL6BO94805 426 aa12.62□□□□□ -0.39
PHTF1-202ENST00000369598 TIMP3P35625 211 aa12.62□□□□□ -0.39
PHTF1-202ENST00000369598 ZNF585BQ52M93 769 aa12.62□□□□□ -0.39
PHTF1-202ENST00000369598 C1orf185Q5T7R7 199 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms