RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ZNF324BQ6AW86 544 aaPredicted RBP15.4■□□□□ 0.06
SNX27-202ENST00000368841 FAM168AQ92567 244 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 SPSB4Q96A44 273 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 C14orf144Q96I85 54 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 GNG5P63218 68 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 ABHD17AQ96GS6 310 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 Q96M66 194 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 TRGV2A0A075B6R0 118 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 PIN1P1O15428 100 aa15.4■□□□□ 0.06
SNX27-202ENST00000368841 SP7Q8TDD2 431 aaPredicted RBP15.4■□□□□ 0.06
SNX27-202ENST00000368841 ZNF146Q15072 292 aa15.39■□□□□ 0.05
SNX27-202ENST00000368841 C7orf69Q9H7B7 122 aa15.39■□□□□ 0.05
SNX27-202ENST00000368841 IGKV1D-43A0A0B4J1Z2 117 aa15.39■□□□□ 0.05
SNX27-202ENST00000368841 SELENOTP62341 195 aa15.39■□□□□ 0.05
SNX27-202ENST00000368841 C10orf128Q5T292 105 aa15.39■□□□□ 0.05
SNX27-202ENST00000368841 PPP1R27Q86WC6 154 aa15.39■□□□□ 0.05
SNX27-202ENST00000368841 HOXD4P09016 255 aaPredicted RBP15.39■□□□□ 0.05
SNX27-202ENST00000368841 CHRNA10Q9GZZ6 450 aa15.39■□□□□ 0.05
SNX27-202ENST00000368841 GCM2O75603 506 aaPredicted RBP15.39■□□□□ 0.05
SNX27-202ENST00000368841 PET117Q6UWS5 81 aa15.39■□□□□ 0.05
SNX27-202ENST00000368841 IGHV3-64A0A075B6Q5 118 aa15.38■□□□□ 0.05
SNX27-202ENST00000368841 TYMSP04818 313 aa15.38■□□□□ 0.05
SNX27-202ENST00000368841 COLCA1Q6ZS62 124 aa15.38■□□□□ 0.05
SNX27-202ENST00000368841 COL4A1P02462 1669 aa15.38■□□□□ 0.05
SNX27-202ENST00000368841 IGHV4-39P01824 125 aa15.38■□□□□ 0.05
SNX27-202ENST00000368841 ACP7Q6ZNF0 438 aa15.38■□□□□ 0.05
SNX27-202ENST00000368841 COL25A1Q9BXS0 654 aaPredicted RBP15.38■□□□□ 0.05
SNX27-202ENST00000368841 MRPL20Q9BYC9 149 aaKnown RBP15.38■□□□□ 0.05
SNX27-202ENST00000368841 SLC25A34Q6PIV7 304 aa15.38■□□□□ 0.05
SNX27-202ENST00000368841 C7orf66A4D0T2 115 aa15.38■□□□□ 0.05
SNX27-202ENST00000368841 FOXH1O75593 365 aa15.38■□□□□ 0.05
SNX27-202ENST00000368841 TRGC1P0CF51 173 aa15.38■□□□□ 0.05
SNX27-202ENST00000368841 MALP21145 153 aa15.38■□□□□ 0.05
SNX27-202ENST00000368841 OR5AN1Q8NGI8 311 aa15.38■□□□□ 0.05
SNX27-202ENST00000368841 LINC00527Q9UJ94 153 aa15.38■□□□□ 0.05
SNX27-202ENST00000368841 TMEM186Q96B77 213 aa15.38■□□□□ 0.05
SNX27-202ENST00000368841 PKIBQ9C010 78 aa15.38■□□□□ 0.05
SNX27-202ENST00000368841 PEX7O00628 323 aa15.38■□□□□ 0.05
SNX27-202ENST00000368841 HLA-DQA1P01909 254 aa15.37■□□□□ 0.05
SNX27-202ENST00000368841 CECR9P0C854 216 aa15.37■□□□□ 0.05
SNX27-202ENST00000368841 ASIPP42127 132 aa15.37■□□□□ 0.05
SNX27-202ENST00000368841 PPP1R32Q7Z5V6 425 aa15.37■□□□□ 0.05
SNX27-202ENST00000368841 ZNF729A6NN14 1252 aaPredicted RBP15.37■□□□□ 0.05
SNX27-202ENST00000368841 ZNF815PA8K554 130 aa15.37■□□□□ 0.05
SNX27-202ENST00000368841 C17orf98A8MV24 154 aa15.37■□□□□ 0.05
SNX27-202ENST00000368841 HLA-DRB1P01911 266 aa15.37■□□□□ 0.05
SNX27-202ENST00000368841 ZP1P60852 638 aa15.37■□□□□ 0.05
SNX27-202ENST00000368841 RPS20P60866 119 aaKnown RBP15.37■□□□□ 0.05
SNX27-202ENST00000368841 MRPS18AQ9NVS2 196 aaKnown RBP15.37■□□□□ 0.05
SNX27-202ENST00000368841 TUBGCP6Q96RT7 1819 aa15.37■□□□□ 0.05
SNX27-202ENST00000368841 APOHP02749 345 aaPredicted RBP15.37■□□□□ 0.05
SNX27-202ENST00000368841 B9A039 149 aa15.37■□□□□ 0.05
SNX27-202ENST00000368841 NPC2P61916 151 aa15.37■□□□□ 0.05
SNX27-202ENST00000368841 JOSD1Q15040 202 aaPredicted RBP15.37■□□□□ 0.05
SNX27-202ENST00000368841 PPP1R3EQ9H7J1 279 aa15.37■□□□□ 0.05
SNX27-202ENST00000368841 PPIFP30405 207 aaKnown RBP15.37■□□□□ 0.05
SNX27-202ENST00000368841 TCF24Q7RTU0 167 aa15.37■□□□□ 0.05
SNX27-202ENST00000368841 JKAMPQ9P055 326 aa15.37■□□□□ 0.05
SNX27-202ENST00000368841 SEMA5BQ9P283 1151 aa15.36■□□□□ 0.05
SNX27-202ENST00000368841 BEND2Q8NDZ0 799 aa15.36■□□□□ 0.05
SNX27-202ENST00000368841 OR13A1Q8NGR1 328 aa15.36■□□□□ 0.05
SNX27-202ENST00000368841 APOMO95445 188 aa15.36■□□□□ 0.05
SNX27-202ENST00000368841 ARPC1AQ92747 370 aa15.36■□□□□ 0.05
SNX27-202ENST00000368841 MPTX1A8MV57 137 aa15.36■□□□□ 0.05
SNX27-202ENST00000368841 SCGB3A1Q96QR1 104 aa15.36■□□□□ 0.05
SNX27-202ENST00000368841 ALKBH7Q9BT30 221 aaPredicted RBP15.36■□□□□ 0.05
SNX27-202ENST00000368841 NDUFA2O43678 99 aa15.36■□□□□ 0.05
SNX27-202ENST00000368841 EGR4Q05215 589 aa15.36■□□□□ 0.05
SNX27-202ENST00000368841 CDX1P47902 265 aaPredicted RBP15.36■□□□□ 0.05
SNX27-202ENST00000368841 FAM19A2Q8N3H0 131 aa15.36■□□□□ 0.05
SNX27-202ENST00000368841 ATP5G3P48201 142 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 ZNF837Q96EG3 531 aaPredicted RBP15.35■□□□□ 0.05
SNX27-202ENST00000368841 NPFFR1Q9GZQ6 430 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 PRR32B1ATL7 298 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 SMIM13P0DJ93 91 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 EVI2AP22794 236 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 CLDND2Q8NHS1 167 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 C2orf88Q9BSF0 95 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 NMBP08949 121 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 CTAG1AP78358 180 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 DMRTA1Q5VZB9 504 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 MIR17HGQ75NE6 70 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 OR11H4Q8NGC9 324 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 PRELID3AQ96N28 172 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 TRBV5-7A0A0A0MS05 114 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 A0A0U1RRA0 63 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 CCL3L1P16619 93 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 VDAC2P45880 294 aaPredicted RBP15.35■□□□□ 0.05
SNX27-202ENST00000368841 HBBP68871 147 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 FAM209BQ5JX69 171 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 STHQ8IWL8 128 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 CD33P20138 364 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 RIPPLY3P57055 190 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 ZNF415Q09FC8 603 aa15.35■□□□□ 0.05
SNX27-202ENST00000368841 ERGP11308 486 aa15.34■□□□□ 0.05
SNX27-202ENST00000368841 IGHV1-2P23083 117 aa15.34■□□□□ 0.05
SNX27-202ENST00000368841 UQCR10Q9UDW1 63 aa15.34■□□□□ 0.05
SNX27-202ENST00000368841 PTGDSP41222 190 aa15.34■□□□□ 0.05
SNX27-202ENST00000368841 PMCHL1Q16048 86 aa15.34■□□□□ 0.05
SNX27-202ENST00000368841 PMCHL2Q9BQD1 86 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms