RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 SMIM8Q96KF7 97 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 AQP10Q96PS8 301 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 PRSS22Q9GZN4 317 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 PLSCR2Q9NRY7 297 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 LCTP09848 1927 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 LY6G6EA0A0G2JKS1 128 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 CFDP00746 253 aaPredicted RBP9.73□□□□□ -0.85
SYNE1-204ENST00000367248 SULT1A2P50226 295 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 SNRPD3P62318 126 aaKnown RBP9.73□□□□□ -0.85
SYNE1-204ENST00000367248 FAM74A3Q4VXF1 159 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 GLRX5Q86SX6 157 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 FBXL7Q9UJT9 491 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 U3KQA8 63 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 A0A087WV48 116 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 TCF15Q12870 199 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 RALGAPA1Q6GYQ0 2036 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 CHAC2Q8WUX2 184 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 GALNT14Q96FL9 552 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 C7orf77A4D0Y5 90 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 GPX1P07203 203 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 PRSS1P07477 247 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 HKR1P10072 659 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 UCP1P25874 307 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 H2BFSP57053 126 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 TCTAP57738 103 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 MRPL54Q6P161 138 aaKnown RBP9.73□□□□□ -0.85
SYNE1-204ENST00000367248 TMEM116Q8NCL8 245 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 ANAPC16Q96DE5 110 aa9.73□□□□□ -0.85
SYNE1-204ENST00000367248 PKDREJQ9NTG1 2253 aa9.72□□□□□ -0.85
SYNE1-204ENST00000367248 IL4P05112 153 aa9.72□□□□□ -0.85
SYNE1-204ENST00000367248 NPIPB3Q92617 1050 aa9.72□□□□□ -0.85
SYNE1-204ENST00000367248 MBD3L4A6NDZ8 208 aaPredicted RBP9.72□□□□□ -0.85
SYNE1-204ENST00000367248 MBD3L3A6NE82 208 aaPredicted RBP9.72□□□□□ -0.85
SYNE1-204ENST00000367248 MBD3L5A6NJ08 208 aaPredicted RBP9.72□□□□□ -0.85
SYNE1-204ENST00000367248 C9JCJ5 164 aa9.72□□□□□ -0.85
SYNE1-204ENST00000367248 AMY1AP04745 511 aa9.72□□□□□ -0.85
SYNE1-204ENST00000367248 ZNF525Q8N782 197 aa9.72□□□□□ -0.85
SYNE1-204ENST00000367248 MBD3L2Q8NHZ7 208 aaPredicted RBP9.72□□□□□ -0.85
SYNE1-204ENST00000367248 PCNX1Q96RV3 2341 aa9.72□□□□□ -0.85
SYNE1-204ENST00000367248 B4DEV8 164 aa9.72□□□□□ -0.85
SYNE1-204ENST00000367248 SEC11CQ9BY50 192 aa9.72□□□□□ -0.85
SYNE1-204ENST00000367248 CREBBPQ92793 2442 aa9.72□□□□□ -0.85
SYNE1-204ENST00000367248 PTPRQQ9UMZ3 2332 aa9.72□□□□□ -0.85
SYNE1-204ENST00000367248 RND3P61587 244 aa9.72□□□□□ -0.85
SYNE1-204ENST00000367248 RIGQ13278 110 aa9.72□□□□□ -0.85
SYNE1-204ENST00000367248 Q96MF0 132 aa9.72□□□□□ -0.85
SYNE1-204ENST00000367248 F12P00748 615 aaPredicted RBP9.72□□□□□ -0.85
SYNE1-204ENST00000367248 KLRD1Q13241 179 aa9.72□□□□□ -0.85
SYNE1-204ENST00000367248 OR2D3Q8NGH3 330 aa9.72□□□□□ -0.85
SYNE1-204ENST00000367248 GTF3AQ92664 365 aaKnown RBP9.72□□□□□ -0.85
SYNE1-204ENST00000367248 CLDN16Q9Y5I7 305 aa9.72□□□□□ -0.85
SYNE1-204ENST00000367248 SBF1O95248 1867 aa9.72□□□□□ -0.85
SYNE1-204ENST00000367248 A0A0B4J293 547 aa9.71□□□□□ -0.85
SYNE1-204ENST00000367248 LOC389332A0A1B0GUA5 103 aa9.71□□□□□ -0.85
SYNE1-204ENST00000367248 C17orf98A8MV24 154 aa9.71□□□□□ -0.85
SYNE1-204ENST00000367248 H3BQ15 152 aa9.71□□□□□ -0.85
SYNE1-204ENST00000367248 TWIST1Q15672 202 aa9.71□□□□□ -0.85
SYNE1-204ENST00000367248 Q5PR19 223 aa9.71□□□□□ -0.85
SYNE1-204ENST00000367248 C12orf54Q6X4T0 127 aa9.71□□□□□ -0.85
SYNE1-204ENST00000367248 IGHV1-46P01743 117 aa9.71□□□□□ -0.85
SYNE1-204ENST00000367248 PRB4P10163 310 aaPredicted RBP9.71□□□□□ -0.85
SYNE1-204ENST00000367248 B3GALT5-AS1P59052 145 aa9.71□□□□□ -0.85
SYNE1-204ENST00000367248 HLA-DRB5Q30154 266 aa9.71□□□□□ -0.85
SYNE1-204ENST00000367248 NR2C2APQ86WQ0 139 aa9.71□□□□□ -0.85
SYNE1-204ENST00000367248 ERVH48-1M5A8F1 160 aa9.71□□□□□ -0.85
SYNE1-204ENST00000367248 HIST1H1BP16401 226 aaKnown RBP9.71□□□□□ -0.85
SYNE1-204ENST00000367248 NOTCH2Q04721 2471 aa9.71□□□□□ -0.86
SYNE1-204ENST00000367248 SRSF7Q16629 238 aaKnown RBP eCLIP9.71□□□□□ -0.86
SYNE1-204ENST00000367248 ANGPTL6Q8NI99 470 aa9.71□□□□□ -0.86
SYNE1-204ENST00000367248 DNAJC4Q9NNZ3 241 aa9.71□□□□□ -0.86
SYNE1-204ENST00000367248 PTBP3O95758 552 aaKnown RBP9.71□□□□□ -0.86
SYNE1-204ENST00000367248 C8orf88P0DMB2 117 aa9.71□□□□□ -0.86
SYNE1-204ENST00000367248 EFNA4P52798 201 aa9.71□□□□□ -0.86
SYNE1-204ENST00000367248 DLK1P80370 383 aa9.71□□□□□ -0.86
SYNE1-204ENST00000367248 MRPL20Q9BYC9 149 aaKnown RBP9.71□□□□□ -0.86
SYNE1-204ENST00000367248 FOXA2Q9Y261 457 aaPredicted RBP9.71□□□□□ -0.86
SYNE1-204ENST00000367248 FAM208BQ5VWN6 2430 aa9.71□□□□□ -0.86
SYNE1-204ENST00000367248 TRBV6-7A0A0A0MS04 114 aa9.71□□□□□ -0.86
SYNE1-204ENST00000367248 CA7P43166 264 aa9.71□□□□□ -0.86
SYNE1-204ENST00000367248 RELQ04864 619 aaPredicted RBP9.71□□□□□ -0.86
SYNE1-204ENST00000367248 WFDC12Q8WWY7 111 aa9.71□□□□□ -0.86
SYNE1-204ENST00000367248 TMPRSS5Q9H3S3 457 aa9.71□□□□□ -0.86
SYNE1-204ENST00000367248 SMDT1Q9H4I9 107 aa9.71□□□□□ -0.86
SYNE1-204ENST00000367248 RLFQ13129 1914 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 DOCK9Q9BZ29 2069 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 PGPA6NDG6 321 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 CA2P00918 260 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 ZNF250P15622 560 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 RAB9AP51151 201 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 EFNB1P98172 346 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 FAM89BQ8N5H3 189 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 SDHCQ99643 169 aaPredicted RBP9.7□□□□□ -0.86
SYNE1-204ENST00000367248 SLC25A15Q9Y619 301 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 NBL1P41271 181 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 UQCRFS1P47985 274 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 ZNF660Q6AZW8 331 aaPredicted RBP9.7□□□□□ -0.86
SYNE1-204ENST00000367248 RPRMLQ8N4K4 120 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 GATAD1Q8WUU5 269 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 RAB24Q969Q5 203 aa9.7□□□□□ -0.86
SYNE1-204ENST00000367248 PATJQ8NI35 1801 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms