RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 A6NJY4 79 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 IFITM10A6NMD0 228 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 VWA1Q6PCB0 445 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 ELOVL1Q9BW60 279 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 RAB9AP51151 201 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 OSR1Q8TAX0 266 aaPredicted RBP10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 WFIKKN1Q96NZ8 548 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 MUC6Q6W4X9 2439 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 RPL27AP46776 148 aaKnown RBP10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 JOSD1Q15040 202 aaPredicted RBP10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 ACP7Q6ZNF0 438 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 A0A087WV48 116 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 LIPFP07098 398 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 HBBP68871 147 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 ZNF600Q6ZNG1 722 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 BMPR1BO00238 502 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 SIAH2O43255 324 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 NUBP1P53384 320 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 TMEM177Q53S58 311 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 Q6AWC8 147 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 A0A0A6YYD4 124 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 C1QTNF9BB2RNN3 333 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 RPL30P62888 115 aaKnown RBP10□□□□□ -0.81
CDC42BPA-202ENST00000366764 TRBV6-6A0A0A6YYG2 114 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 TCF21O43680 179 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 IGHV3-13P01766 116 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 IGHV3-7P01780 117 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 CSN3P07498 182 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 CBLN4Q9NTU7 201 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 CBLN1P23435 193 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 SRSF3P84103 164 aaKnown RBP10□□□□□ -0.81
CDC42BPA-202ENST00000366764 ERASQ7Z444 233 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 OR52E5Q8NH55 327 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 AGMATQ9BSE5 352 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 IGKV3D-15A0A087WSY6 115 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 FABP2P12104 132 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 MDKP21741 143 aaPredicted RBP10□□□□□ -0.81
CDC42BPA-202ENST00000366764 CRYGSP22914 178 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 ZNF497Q6ZNH5 498 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 TNFRSF19Q9NS68 423 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 HSPB7Q9UBY9 170 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 TMEM116Q8NCL8 245 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 DPRXA6NFQ7 191 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 KLF7O75840 302 aaPredicted RBP10□□□□□ -0.81
CDC42BPA-202ENST00000366764 SCGB1C2P0DMR2 95 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 TGIF1Q15583 401 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 MAFAQ8NHW3 353 aaPredicted RBP10□□□□□ -0.81
CDC42BPA-202ENST00000366764 TMEM186Q96B77 213 aa10□□□□□ -0.81
CDC42BPA-202ENST00000366764 MAS1LP35410 378 aa9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 LEMD1Q68G75 181 aa9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 LURAP1LQ8IV03 231 aa9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 NAPSAO96009 420 aa9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 TMEM70Q9BUB7 260 aa9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 TRAV30A0A087WSZ9 112 aa9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 TMEM11P17152 192 aa9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 C17orf51A8MQB3 221 aa9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 ERVFRD-1P60508 538 aa9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 KCNS1Q96KK3 526 aa9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 C12orf77C9JDV5 145 aa9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 PARD6GQ9BYG4 376 aaPredicted RBP9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 IDI2-AS1Q9NZ38 188 aa9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 MRPL14Q6P1L8 145 aaKnown RBP9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 OTX1P32242 354 aaPredicted RBP9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 FHL1Q13642 323 aa9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 NABP2Q9BQ15 211 aa9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 OR8A1Q8NGG7 326 aa9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 EML5Q05BV3 1969 aa9.99□□□□□ -0.81
CDC42BPA-202ENST00000366764 C17orf82Q86X59 251 aaPredicted RBP9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 C10orf91Q5T1B1 145 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 NPIPB11E5RHQ5 1161 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 PPIHO43447 177 aaKnown RBP9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 KLK10O43240 276 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 TIAF1O95411 115 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 RPL23P62829 140 aaKnown RBP9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 C3AR1Q16581 482 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 NMSQ5H8A3 153 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 OR4A47Q6IF82 309 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 TCF24Q7RTU0 167 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 HIST3H2BBQ8N257 126 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 HIST1H2BLQ99880 126 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 MIEN1Q9BRT3 115 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 LTBP2Q14767 1821 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 SNCGO76070 127 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 GNB2P62879 340 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 FAM222BQ8WU58 562 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 TRGV8A0A0C4DH27 118 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 FBLL1A6NHQ2 334 aaKnown RBP9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 RHBDL1O75783 438 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 HERPUD1Q15011 391 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 TMEM42Q69YG0 159 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 AP5S1Q9NUS5 200 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 UFC1Q9Y3C8 167 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 PPIAL4EA0A075B759 164 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 PPIAL4DF5H284 164 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 PPIAL4FP0DN26 164 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 PPIAL4AQ9Y536 164 aa9.98□□□□□ -0.81
CDC42BPA-202ENST00000366764 PROB1E7EW31 1015 aa9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 ZNF207O43670 478 aaKnown RBP9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 HOXA4Q00056 320 aaPredicted RBP9.97□□□□□ -0.81
CDC42BPA-202ENST00000366764 RNASEH2CQ8TDP1 164 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms