RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 BIRC6Q9NR09 4857 aa9.04□□□□□ -0.96
CSNK1E-202ENST00000366216 IGHV3OR16-10A0A075B7F0 116 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 IGHV2-26A0A0B4J1V2 119 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 MARCH11A6NNE9 402 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 A8MXK9 166 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 WRBO00258 174 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 MED6O75586 246 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 CFDP00746 253 aaPredicted RBP9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 IGLV1-47P01700 117 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 IGHV4-38-2P0DP08 117 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 PRRX1P54821 245 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 TAS2R30P59541 319 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 ERVK-16P61578 105 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 VAMP2P63027 116 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 EXOSC2Q13868 293 aaKnown RBP9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 POU2AF1Q16633 256 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 RTL8BQ17RB0 113 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 IZUMO4Q1ZYL8 232 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 AARDQ4LEZ3 155 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 SAMD5Q5TGI4 173 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 OR2C3Q8N628 320 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 OR5AN1Q8NGI8 311 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 STOML3Q8TAV4 291 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 ST8SIA2Q92186 375 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 PCGF1Q9BSM1 259 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 SLC25A31Q9H0C2 315 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 CYTL1Q9NRR1 136 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 CACFD1Q9UGQ2 172 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 UBQLN2Q9UHD9 624 aa9.03□□□□□ -0.96
CSNK1E-202ENST00000366216 SYNGR2O43760 224 aa9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 CHST1O43916 411 aa9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 SSSCA1O60232 199 aa9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 HRASP01112 189 aa9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 EIF5AP63241 154 aaKnown RBP9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 Q8N7P7 452 aa9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 SCARB1Q8WTV0 552 aa9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 PHYHIPLQ96FC7 376 aa9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 NABP2Q9BQ15 211 aa9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 AIFM2Q9BRQ8 373 aa9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 ZNF471Q9BX82 626 aaPredicted RBP9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 CLEC7AQ9BXN2 247 aa9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 MAGT1Q9H0U3 335 aa9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 ZC4H2Q9NQZ6 224 aa9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 TNFRSF19Q9NS68 423 aa9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 SLC35D1Q9NTN3 355 aa9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 LYRM2Q9NU23 88 aaPredicted RBP9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 ZNRD1Q9P1U0 126 aa9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 HSPB7Q9UBY9 170 aa9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 WSB1Q9Y6I7 421 aa9.02□□□□□ -0.97
CSNK1E-202ENST00000366216 DYNC2H1Q8NCM8 4307 aaKnown RBP9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 H0YJW9 148 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 ENSAO43768 121 aaKnown RBP9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 LY86O95711 162 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 TMEM50AO95807 157 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 CRYZL1O95825 349 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 APOA2P02652 100 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 GAPDHP04406 335 aaKnown RBP9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 TPT1P13693 172 aaKnown RBP9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 PAX9P55771 341 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 PROK1P58294 105 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 RPL23AP62750 156 aaKnown RBP9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 TNFRSF9Q07011 255 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 BAXQ07812 192 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 HLA-DRB5Q30154 266 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 PDPNQ86YL7 162 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 TMEM252Q8N6L7 170 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 OR11H6Q8NGC7 330 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 OR13D1Q8NGV5 346 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 OR52E5Q8NH55 327 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 OSR1Q8TAX0 266 aaPredicted RBP9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 SMIM8Q96KF7 97 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 MRPL20Q9BYC9 149 aaKnown RBP9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 PRDM13Q9H4Q3 707 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 ONECUT1Q9UBC0 465 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 AMMECR1Q9Y4X0 333 aaPredicted RBP9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 KPTNQ9Y664 436 aa9.01□□□□□ -0.97
CSNK1E-202ENST00000366216 RYR2Q92736 4967 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 FAM24AA6NFZ4 105 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 TXNL1O43396 289 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 JTBO76095 146 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 SPDEFO95238 335 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 IL6RP08887 468 aaPredicted RBP9□□□□□ -0.97
CSNK1E-202ENST00000366216 MC5RP33032 325 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 HTR2BP41595 481 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 RAB13P51153 203 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 UBE2KP61086 200 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 RPL15P61313 204 aaKnown RBP9□□□□□ -0.97
CSNK1E-202ENST00000366216 EWSR1Q01844 656 aaKnown RBP eCLIP9□□□□□ -0.97
CSNK1E-202ENST00000366216 PAX2Q02962 417 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 PAX8Q06710 450 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 DEFB112Q30KQ8 113 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 TMEM177Q53S58 311 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 CLLU1Q5K131 121 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 RUSC1-AS1Q66K80 236 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 TGIF2LXQ8IUE1 241 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 BAP18Q8IXM2 172 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 LINC00528Q8N1L1 170 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 LINC01006Q8NI28 216 aa9□□□□□ -0.97
CSNK1E-202ENST00000366216 RHOVQ96L33 236 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms