RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 SBF1O95248 1867 aa15.65■□□□□ 0.1
CLIP2-202ENST00000361545 THSD7BQ9C0I4 1608 aa15.65■□□□□ 0.1
CLIP2-202ENST00000361545 GPX1P07203 203 aa15.65■□□□□ 0.1
CLIP2-202ENST00000361545 SLC25A33Q9BSK2 321 aa15.65■□□□□ 0.1
CLIP2-202ENST00000361545 FBXL7Q9UJT9 491 aa15.65■□□□□ 0.1
CLIP2-202ENST00000361545 A0A087WV48 116 aa15.64■□□□□ 0.09
CLIP2-202ENST00000361545 FAM181BA6NEQ2 426 aa15.64■□□□□ 0.09
CLIP2-202ENST00000361545 MYOZ3Q8TDC0 251 aa15.64■□□□□ 0.09
CLIP2-202ENST00000361545 MAP1LC3CQ9BXW4 147 aa15.64■□□□□ 0.09
CLIP2-202ENST00000361545 AP5S1Q9NUS5 200 aa15.64■□□□□ 0.09
CLIP2-202ENST00000361545 CD24P25063 80 aa15.64■□□□□ 0.09
CLIP2-202ENST00000361545 TMEM183BQ1AE95 376 aa15.64■□□□□ 0.09
CLIP2-202ENST00000361545 OR4A47Q6IF82 309 aa15.64■□□□□ 0.09
CLIP2-202ENST00000361545 PSG9Q00887 426 aa15.64■□□□□ 0.09
CLIP2-202ENST00000361545 WDFY1Q8IWB7 410 aa15.64■□□□□ 0.09
CLIP2-202ENST00000361545 SYT8Q8NBV8 401 aa15.64■□□□□ 0.09
CLIP2-202ENST00000361545 TMEM191AQ9H0A3 160 aa15.64■□□□□ 0.09
CLIP2-202ENST00000361545 GSX1Q9H4S2 264 aaPredicted RBP15.64■□□□□ 0.09
CLIP2-202ENST00000361545 LYPD3O95274 346 aa15.64■□□□□ 0.09
CLIP2-202ENST00000361545 RPS11P62280 158 aaKnown RBP eCLIP15.64■□□□□ 0.09
CLIP2-202ENST00000361545 PPP1R27Q86WC6 154 aa15.64■□□□□ 0.09
CLIP2-202ENST00000361545 ZNF418Q8TF45 676 aaPredicted RBP15.64■□□□□ 0.09
CLIP2-202ENST00000361545 COL4A6Q14031 1691 aa15.64■□□□□ 0.09
CLIP2-202ENST00000361545 HERVK_113P61574 105 aa15.63■□□□□ 0.09
CLIP2-202ENST00000361545 WDR82Q6UXN9 313 aa15.63■□□□□ 0.09
CLIP2-202ENST00000361545 CFDP00746 253 aaPredicted RBP15.63■□□□□ 0.09
CLIP2-202ENST00000361545 GGNQ86UU5 652 aa15.63■□□□□ 0.09
CLIP2-202ENST00000361545 MST1P26927 711 aa15.63■□□□□ 0.09
CLIP2-202ENST00000361545 SNRPD3P62318 126 aaKnown RBP15.63■□□□□ 0.09
CLIP2-202ENST00000361545 CX3CL1P78423 397 aa15.63■□□□□ 0.09
CLIP2-202ENST00000361545 RTN4RL2Q86UN3 420 aa15.63■□□□□ 0.09
CLIP2-202ENST00000361545 LYZL4Q96KX0 146 aa15.63■□□□□ 0.09
CLIP2-202ENST00000361545 AQP10Q96PS8 301 aa15.63■□□□□ 0.09
CLIP2-202ENST00000361545 PHLDA3Q9Y5J5 127 aa15.63■□□□□ 0.09
CLIP2-202ENST00000361545 CACNA1DQ01668 2161 aa15.63■□□□□ 0.09
CLIP2-202ENST00000361545 HIST1H1AQ02539 215 aaPredicted RBP15.63■□□□□ 0.09
CLIP2-202ENST00000361545 ZIC4Q8N9L1 334 aa15.63■□□□□ 0.09
CLIP2-202ENST00000361545 IGHV3-11P01762 117 aa15.62■□□□□ 0.09
CLIP2-202ENST00000361545 DCAF16Q9NXF7 216 aa15.62■□□□□ 0.09
CLIP2-202ENST00000361545 FOXA2Q9Y261 457 aaPredicted RBP15.62■□□□□ 0.09
CLIP2-202ENST00000361545 CRYBB3P26998 211 aa15.62■□□□□ 0.09
CLIP2-202ENST00000361545 ZNF660Q6AZW8 331 aaPredicted RBP15.62■□□□□ 0.09
CLIP2-202ENST00000361545 FAM90A1Q86YD7 464 aa15.62■□□□□ 0.09
CLIP2-202ENST00000361545 AMY1AP04745 511 aa15.62■□□□□ 0.09
CLIP2-202ENST00000361545 DOPEY2Q9Y3R5 2298 aa15.62■□□□□ 0.09
CLIP2-202ENST00000361545 RRHO14718 337 aa15.62■□□□□ 0.09
CLIP2-202ENST00000361545 GPR183P32249 361 aa15.62■□□□□ 0.09
CLIP2-202ENST00000361545 TIMP3P35625 211 aa15.62■□□□□ 0.09
CLIP2-202ENST00000361545 WFIKKN1Q96NZ8 548 aa15.62■□□□□ 0.09
CLIP2-202ENST00000361545 DOCK8Q8NF50 2099 aa15.62■□□□□ 0.09
CLIP2-202ENST00000361545 ARPC1AQ92747 370 aa15.61■□□□□ 0.09
CLIP2-202ENST00000361545 ZNF319Q9P2F9 582 aa15.61■□□□□ 0.09
CLIP2-202ENST00000361545 ZNF362Q5T0B9 420 aaPredicted RBP15.61■□□□□ 0.09
CLIP2-202ENST00000361545 LINC00305Q7Z4B0 112 aa15.61■□□□□ 0.09
CLIP2-202ENST00000361545 OR4X2Q8NGF9 303 aa15.61■□□□□ 0.09
CLIP2-202ENST00000361545 TMEM177Q53S58 311 aa15.61■□□□□ 0.09
CLIP2-202ENST00000361545 MYO7BQ6PIF6 2116 aa15.61■□□□□ 0.09
CLIP2-202ENST00000361545 ZNF383Q8NA42 475 aa15.61■□□□□ 0.09
CLIP2-202ENST00000361545 DIDO1Q9BTC0 2240 aaKnown RBP15.61■□□□□ 0.09
CLIP2-202ENST00000361545 TCTAP57738 103 aa15.61■□□□□ 0.09
CLIP2-202ENST00000361545 AMMECR1LQ6DCA0 310 aa15.61■□□□□ 0.09
CLIP2-202ENST00000361545 GOLT1AQ6ZVE7 132 aa15.61■□□□□ 0.09
CLIP2-202ENST00000361545 FAM3BP58499 235 aaPredicted RBP15.6■□□□□ 0.09
CLIP2-202ENST00000361545 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.6■□□□□ 0.09
CLIP2-202ENST00000361545 CACNA1HO95180 2353 aa15.6■□□□□ 0.09
CLIP2-202ENST00000361545 ZNF25P17030 456 aaPredicted RBP15.6■□□□□ 0.09
CLIP2-202ENST00000361545 ANOS1P23352 680 aa15.6■□□□□ 0.09
CLIP2-202ENST00000361545 Q5BKY6 102 aa15.6■□□□□ 0.09
CLIP2-202ENST00000361545 PGLYRP4Q96LB8 373 aa15.6■□□□□ 0.09
CLIP2-202ENST00000361545 ELOA3CA0A087WX78 387 aaPredicted RBP15.6■□□□□ 0.09
CLIP2-202ENST00000361545 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.6■□□□□ 0.09
CLIP2-202ENST00000361545 PRR32B1ATL7 298 aa15.6■□□□□ 0.09
CLIP2-202ENST00000361545 BTF3P20290 206 aaKnown RBP15.6■□□□□ 0.09
CLIP2-202ENST00000361545 COLCA1Q6ZS62 124 aa15.6■□□□□ 0.09
CLIP2-202ENST00000361545 BMPERQ8N8U9 685 aa15.6■□□□□ 0.09
CLIP2-202ENST00000361545 PACRGQ96M98 296 aaPredicted RBP15.6■□□□□ 0.09
CLIP2-202ENST00000361545 IGKV1-9A0A0C4DH69 117 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 IGHV1-46P01743 117 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 RAB9AP51151 201 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 CLEC19AQ6UXS0 136 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 HEATR5BQ9P2D3 2071 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 MSGN1A6NI15 193 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 FOXI3A8MTJ6 420 aaPredicted RBP15.59■□□□□ 0.09
CLIP2-202ENST00000361545 UBE2L6O14933 153 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 SRSF12Q8WXF0 261 aaKnown RBP15.59■□□□□ 0.09
CLIP2-202ENST00000361545 TUBA4BQ9H853 241 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 A0A0G2JLM5 398 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 CKS2P33552 79 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 FHITP49789 147 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 DLX6P56179 175 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 FAM74A4Q5TZK3 123 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 RARRES2Q99969 163 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 KLHDC3Q9BQ90 382 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 DLX1P56177 255 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 IFI27L2Q9H2X8 130 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 C21orf62Q9NYP8 219 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 PI4KAP42356 2102 aa15.59■□□□□ 0.09
CLIP2-202ENST00000361545 SIGLEC5O15389 551 aa15.58■□□□□ 0.09
CLIP2-202ENST00000361545 SIAH2O43255 324 aa15.58■□□□□ 0.09
CLIP2-202ENST00000361545 IGFBP3P17936 291 aaPredicted RBP15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms