RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 OR51B2Q9Y5P1 312 aa13.47□□□□□ -0.25
LMNA-202ENST00000361308 HMX3A6NHT5 357 aa13.47□□□□□ -0.25
LMNA-202ENST00000361308 SH2D7A6NKC9 451 aaPredicted RBP13.47□□□□□ -0.25
LMNA-202ENST00000361308 OPN1MWP04001 364 aa13.47□□□□□ -0.25
LMNA-202ENST00000361308 OPN1MW2P0DN77 364 aa13.47□□□□□ -0.25
LMNA-202ENST00000361308 OPN1MW3P0DN78 364 aa13.47□□□□□ -0.25
LMNA-202ENST00000361308 H2BFSP57053 126 aa13.47□□□□□ -0.25
LMNA-202ENST00000361308 CX3CL1P78423 397 aa13.47□□□□□ -0.25
LMNA-202ENST00000361308 C9orf152Q5JTZ5 239 aa13.47□□□□□ -0.25
LMNA-202ENST00000361308 FOXRED2Q8IWF2 684 aa13.47□□□□□ -0.25
LMNA-202ENST00000361308 QTRT1Q9BXR0 403 aaKnown RBP13.47□□□□□ -0.25
LMNA-202ENST00000361308 NPFFR1Q9GZQ6 430 aa13.47□□□□□ -0.25
LMNA-202ENST00000361308 CACFD1Q9UGQ2 172 aa13.47□□□□□ -0.25
LMNA-202ENST00000361308 FOXA2Q9Y261 457 aaPredicted RBP13.47□□□□□ -0.25
LMNA-202ENST00000361308 TRIM77I1YAP6 450 aa13.46□□□□□ -0.25
LMNA-202ENST00000361308 PITX3O75364 302 aa13.46□□□□□ -0.25
LMNA-202ENST00000361308 IFNA17P01571 189 aa13.46□□□□□ -0.25
LMNA-202ENST00000361308 RNASE1P07998 156 aaKnown RBP13.46□□□□□ -0.25
LMNA-202ENST00000361308 CYCSP99999 105 aaKnown RBP13.46□□□□□ -0.25
LMNA-202ENST00000361308 FXYD3Q14802 87 aa13.46□□□□□ -0.25
LMNA-202ENST00000361308 OR5B3Q8NH48 314 aa13.46□□□□□ -0.25
LMNA-202ENST00000361308 ZNF257Q9Y2Q1 563 aa13.46□□□□□ -0.25
LMNA-202ENST00000361308 IGHV7-81A0A0B4J1V7 117 aa13.45□□□□□ -0.26
LMNA-202ENST00000361308 TEX50A0A1B0GTY4 177 aa13.45□□□□□ -0.26
LMNA-202ENST00000361308 FAM181BA6NEQ2 426 aa13.45□□□□□ -0.26
LMNA-202ENST00000361308 ST8SIA3O43173 380 aa13.45□□□□□ -0.26
LMNA-202ENST00000361308 NXPH3O95157 252 aa13.45□□□□□ -0.26
LMNA-202ENST00000361308 COMPP49747 757 aaPredicted RBP13.45□□□□□ -0.26
LMNA-202ENST00000361308 HSPE1P61604 102 aaKnown RBP13.45□□□□□ -0.26
LMNA-202ENST00000361308 UBA52P62987 128 aaKnown RBP13.45□□□□□ -0.26
LMNA-202ENST00000361308 ZBTB8BQ8NAP8 495 aaPredicted RBP13.45□□□□□ -0.26
LMNA-202ENST00000361308 CRYBA1P05813 215 aa13.44□□□□□ -0.26
LMNA-202ENST00000361308 MYOD1P15172 320 aa13.44□□□□□ -0.26
LMNA-202ENST00000361308 BCAP31P51572 246 aa13.44□□□□□ -0.26
LMNA-202ENST00000361308 CXorf66Q5JRM2 361 aaPredicted RBP13.44□□□□□ -0.26
LMNA-202ENST00000361308 OR1L8Q8NGR8 309 aa13.44□□□□□ -0.26
LMNA-202ENST00000361308 OR52E5Q8NH55 327 aa13.44□□□□□ -0.26
LMNA-202ENST00000361308 HSPB9Q9BQS6 159 aa13.44□□□□□ -0.26
LMNA-202ENST00000361308 NMES1Q9C002 83 aa13.44□□□□□ -0.26
LMNA-202ENST00000361308 ZNF436Q9C0F3 470 aaPredicted RBP13.44□□□□□ -0.26
LMNA-202ENST00000361308 PRSS22Q9GZN4 317 aa13.44□□□□□ -0.26
LMNA-202ENST00000361308 NKX2-1P43699 371 aaPredicted RBP13.44□□□□□ -0.26
LMNA-202ENST00000361308 RPL27AP46776 148 aaKnown RBP13.44□□□□□ -0.26
LMNA-202ENST00000361308 RPL15P61313 204 aaKnown RBP13.44□□□□□ -0.26
LMNA-202ENST00000361308 AARDQ4LEZ3 155 aa13.44□□□□□ -0.26
LMNA-202ENST00000361308 C10orf55Q5SWW7 151 aa13.44□□□□□ -0.26
LMNA-202ENST00000361308 OR4D5Q8NGN0 318 aa13.44□□□□□ -0.26
LMNA-202ENST00000361308 ABHD5Q8WTS1 349 aa13.44□□□□□ -0.26
LMNA-202ENST00000361308 SRSF12Q8WXF0 261 aaKnown RBP13.44□□□□□ -0.26
LMNA-202ENST00000361308 HINT2Q9BX68 163 aa13.44□□□□□ -0.26
LMNA-202ENST00000361308 CUBNO60494 3623 aa13.43□□□□□ -0.26
LMNA-202ENST00000361308 MSGN1A6NI15 193 aa13.43□□□□□ -0.26
LMNA-202ENST00000361308 E7EUB6 86 aa13.43□□□□□ -0.26
LMNA-202ENST00000361308 SCGB1D2O95969 90 aa13.43□□□□□ -0.26
LMNA-202ENST00000361308 TRAPPC2P0DI81 140 aa13.43□□□□□ -0.26
LMNA-202ENST00000361308 TRAPPC2BP0DI82 140 aa13.43□□□□□ -0.26
LMNA-202ENST00000361308 SPCS3P61009 180 aa13.43□□□□□ -0.26
LMNA-202ENST00000361308 SSBP2P81877 361 aaPredicted RBP13.43□□□□□ -0.26
LMNA-202ENST00000361308 ID3Q02535 119 aa13.43□□□□□ -0.26
LMNA-202ENST00000361308 TNFRSF9Q07011 255 aa13.43□□□□□ -0.26
LMNA-202ENST00000361308 GRPEL2Q8TAA5 225 aa13.43□□□□□ -0.26
LMNA-202ENST00000361308 ARPC1AQ92747 370 aa13.43□□□□□ -0.26
LMNA-202ENST00000361308 FYTTD1Q96QD9 318 aaKnown RBP13.43□□□□□ -0.26
LMNA-202ENST00000361308 HSPB7Q9UBY9 170 aa13.43□□□□□ -0.26
LMNA-202ENST00000361308 TNCP24821 2201 aa13.43□□□□□ -0.26
LMNA-202ENST00000361308 LINC01548A6NM66 108 aa13.42□□□□□ -0.26
LMNA-202ENST00000361308 FAM90A26D6RGX4 464 aa13.42□□□□□ -0.26
LMNA-202ENST00000361308 KCNAB3O43448 404 aa13.42□□□□□ -0.26
LMNA-202ENST00000361308 IGHG2P01859 326 aa13.42□□□□□ -0.26
LMNA-202ENST00000361308 IL15RAQ13261 267 aa13.42□□□□□ -0.26
LMNA-202ENST00000361308 Q6ZS46 218 aa13.42□□□□□ -0.26
LMNA-202ENST00000361308 SLC35E3Q7Z769 313 aa13.42□□□□□ -0.26
LMNA-202ENST00000361308 CHAC2Q8WUX2 184 aa13.42□□□□□ -0.26
LMNA-202ENST00000361308 FAM103A1Q9BTL3 118 aaKnown RBP13.42□□□□□ -0.26
LMNA-202ENST00000361308 NDUFA4L2Q9NRX3 87 aa13.42□□□□□ -0.26
LMNA-202ENST00000361308 CEBPZOSA8MTT3 80 aa13.42□□□□□ -0.26
LMNA-202ENST00000361308 PLXNB1O43157 2135 aa13.42□□□□□ -0.26
LMNA-202ENST00000361308 PRCDQ00LT1 54 aa13.42□□□□□ -0.26
LMNA-202ENST00000361308 CD83Q01151 205 aa13.42□□□□□ -0.26
LMNA-202ENST00000361308 SRSF4Q08170 494 aaKnown RBP13.42□□□□□ -0.26
LMNA-202ENST00000361308 SPINK9Q5DT21 86 aa13.42□□□□□ -0.26
LMNA-202ENST00000361308 ARSJQ5FYB0 599 aaPredicted RBP13.42□□□□□ -0.26
LMNA-202ENST00000361308 ASB13Q8WXK3 278 aa13.42□□□□□ -0.26
LMNA-202ENST00000361308 WDR89Q96FK6 387 aaPredicted RBP13.42□□□□□ -0.26
LMNA-202ENST00000361308 PARP11Q9NR21 331 aa13.42□□□□□ -0.26
LMNA-202ENST00000361308 WRBO00258 174 aa13.41□□□□□ -0.26
LMNA-202ENST00000361308 MED6O75586 246 aa13.41□□□□□ -0.26
LMNA-202ENST00000361308 MBPP02686 304 aaPredicted RBP13.41□□□□□ -0.26
LMNA-202ENST00000361308 GIPP09681 153 aaPredicted RBP13.41□□□□□ -0.26
LMNA-202ENST00000361308 NDPQ00604 133 aa13.41□□□□□ -0.26
LMNA-202ENST00000361308 LRRC37A5PQ49AS3 106 aa13.41□□□□□ -0.26
LMNA-202ENST00000361308 PDLIM3Q53GG5 364 aaPredicted RBP13.41□□□□□ -0.26
LMNA-202ENST00000361308 MAGT1Q9H0U3 335 aa13.41□□□□□ -0.26
LMNA-202ENST00000361308 PLEKHA3Q9HB20 300 aa13.41□□□□□ -0.26
LMNA-202ENST00000361308 ENY2Q9NPA8 101 aa13.41□□□□□ -0.26
LMNA-202ENST00000361308 ZFP57Q9NU63 452 aa13.41□□□□□ -0.26
LMNA-202ENST00000361308 CGB1A6NKQ9 187 aa13.4□□□□□ -0.26
LMNA-202ENST00000361308 ATP6V0E1O15342 81 aa13.4□□□□□ -0.26
LMNA-202ENST00000361308 SYNGR2O43760 224 aa13.4□□□□□ -0.26
LMNA-202ENST00000361308 POLR2GP62487 172 aaKnown RBP eCLIP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms