RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 IGHV2-5P01817 119 aa11.78□□□□□ -0.52
SMC5-201ENST00000361138 RPL39P5Q59GN2 51 aa11.78□□□□□ -0.52
SMC5-201ENST00000361138 DCAF10Q5QP82 559 aa11.78□□□□□ -0.52
SMC5-201ENST00000361138 LEAP2Q969E1 77 aa11.78□□□□□ -0.52
SMC5-201ENST00000361138 CCL13Q99616 98 aa11.78□□□□□ -0.52
SMC5-201ENST00000361138 EREGO14944 169 aa11.78□□□□□ -0.52
SMC5-201ENST00000361138 GOSR1O95249 250 aa11.78□□□□□ -0.52
SMC5-201ENST00000361138 CRYABP02511 175 aaKnown RBP11.78□□□□□ -0.52
SMC5-201ENST00000361138 MGPP08493 103 aa11.78□□□□□ -0.52
SMC5-201ENST00000361138 FAM131CQ96AQ9 280 aa11.78□□□□□ -0.52
SMC5-201ENST00000361138 LINC00470Q9BZP3 86 aa11.78□□□□□ -0.52
SMC5-201ENST00000361138 ARID1AO14497 2285 aa11.78□□□□□ -0.52
SMC5-201ENST00000361138 C21orf140B9A014 251 aa11.78□□□□□ -0.52
SMC5-201ENST00000361138 CA7P43166 264 aa11.78□□□□□ -0.52
SMC5-201ENST00000361138 ZNF837Q96EG3 531 aaPredicted RBP11.78□□□□□ -0.52
SMC5-201ENST00000361138 PGPEP1LA6NFU8 196 aa11.78□□□□□ -0.52
SMC5-201ENST00000361138 FOXL1Q12952 345 aa11.78□□□□□ -0.52
SMC5-201ENST00000361138 SRSF7Q16629 238 aaKnown RBP eCLIP11.78□□□□□ -0.52
SMC5-201ENST00000361138 HCP5Q6MZN7 132 aa11.78□□□□□ -0.52
SMC5-201ENST00000361138 MTURNQ8N3F0 131 aa11.78□□□□□ -0.52
SMC5-201ENST00000361138 OCC1Q8TAD7 63 aa11.78□□□□□ -0.52
SMC5-201ENST00000361138 EAF1Q96JC9 268 aaPredicted RBP11.78□□□□□ -0.52
SMC5-201ENST00000361138 PEX7O00628 323 aa11.77□□□□□ -0.52
SMC5-201ENST00000361138 SNAI2O43623 268 aa11.77□□□□□ -0.52
SMC5-201ENST00000361138 KLF14Q8TD94 323 aaPredicted RBP11.77□□□□□ -0.52
SMC5-201ENST00000361138 A0A1W2PRD5 423 aa11.77□□□□□ -0.52
SMC5-201ENST00000361138 A0A1W2PRF3 423 aa11.77□□□□□ -0.52
SMC5-201ENST00000361138 A0A1W2PRM7 423 aa11.77□□□□□ -0.52
SMC5-201ENST00000361138 NAPSAO96009 420 aa11.77□□□□□ -0.52
SMC5-201ENST00000361138 ACSF3Q4G176 576 aaPredicted RBP11.77□□□□□ -0.52
SMC5-201ENST00000361138 LINC00305Q7Z4B0 112 aa11.77□□□□□ -0.52
SMC5-201ENST00000361138 SLC25A45Q8N413 288 aa11.77□□□□□ -0.52
SMC5-201ENST00000361138 ZNF703Q9H7S9 590 aaPredicted RBP11.77□□□□□ -0.52
SMC5-201ENST00000361138 SOX21Q9Y651 276 aaPredicted RBP11.77□□□□□ -0.52
SMC5-201ENST00000361138 ZNF716A6NP11 495 aa11.77□□□□□ -0.53
SMC5-201ENST00000361138 RPL27AP46776 148 aaKnown RBP11.77□□□□□ -0.53
SMC5-201ENST00000361138 TEX38Q6PEX7 206 aa11.77□□□□□ -0.53
SMC5-201ENST00000361138 SMRP1Q8NCR6 262 aa11.77□□□□□ -0.53
SMC5-201ENST00000361138 EPOPA6NHQ4 379 aa11.77□□□□□ -0.53
SMC5-201ENST00000361138 SLC25A17O43808 307 aa11.77□□□□□ -0.53
SMC5-201ENST00000361138 BMI1P35226 326 aa11.77□□□□□ -0.53
SMC5-201ENST00000361138 ATP5IP56385 69 aaPredicted RBP11.77□□□□□ -0.53
SMC5-201ENST00000361138 SPOCK3Q9BQ16 436 aa11.77□□□□□ -0.53
SMC5-201ENST00000361138 LOC107984156A0A0G2JMH3 177 aa11.77□□□□□ -0.53
SMC5-201ENST00000361138 C7orf71A4D174 169 aa11.77□□□□□ -0.53
SMC5-201ENST00000361138 GPR183P32249 361 aa11.77□□□□□ -0.53
SMC5-201ENST00000361138 ARL17AQ8IVW1 177 aa11.77□□□□□ -0.53
SMC5-201ENST00000361138 RSPO3Q9BXY4 272 aaPredicted RBP11.77□□□□□ -0.53
SMC5-201ENST00000361138 SCN2AQ99250 2005 aa11.77□□□□□ -0.53
SMC5-201ENST00000361138 RLFQ13129 1914 aa11.76□□□□□ -0.53
SMC5-201ENST00000361138 WDR81Q562E7 1941 aa11.76□□□□□ -0.53
SMC5-201ENST00000361138 CD40P25942 277 aa11.76□□□□□ -0.53
SMC5-201ENST00000361138 REPIN1Q9BWE0 567 aaKnown RBP11.76□□□□□ -0.53
SMC5-201ENST00000361138 RPP21Q9H633 154 aaKnown RBP11.76□□□□□ -0.53
SMC5-201ENST00000361138 KLF2Q9Y5W3 355 aaPredicted RBP11.76□□□□□ -0.53
SMC5-201ENST00000361138 SPANXN1Q5VSR9 72 aa11.76□□□□□ -0.53
SMC5-201ENST00000361138 C1orf210Q8IVY1 113 aa11.76□□□□□ -0.53
SMC5-201ENST00000361138 APOHP02749 345 aaPredicted RBP11.76□□□□□ -0.53
SMC5-201ENST00000361138 RNF144BQ7Z419 303 aa11.76□□□□□ -0.53
SMC5-201ENST00000361138 CLEC1BQ9P126 229 aa11.76□□□□□ -0.53
SMC5-201ENST00000361138 LINC00271P0C7V0 271 aa11.76□□□□□ -0.53
SMC5-201ENST00000361138 RPS20P60866 119 aaKnown RBP11.76□□□□□ -0.53
SMC5-201ENST00000361138 HGFACQ04756 655 aa11.76□□□□□ -0.53
SMC5-201ENST00000361138 FAM157AC9JC47 383 aa11.76□□□□□ -0.53
SMC5-201ENST00000361138 RAMP3O60896 148 aa11.76□□□□□ -0.53
SMC5-201ENST00000361138 TIAF1O95411 115 aa11.76□□□□□ -0.53
SMC5-201ENST00000361138 SAMD13Q5VXD3 122 aa11.76□□□□□ -0.53
SMC5-201ENST00000361138 PLPPR1Q8TBJ4 325 aa11.76□□□□□ -0.53
SMC5-201ENST00000361138 TMEM171Q8WVE6 324 aa11.76□□□□□ -0.53
SMC5-201ENST00000361138 ZNF414Q96IQ9 312 aa11.76□□□□□ -0.53
SMC5-201ENST00000361138 LPAR2Q9HBW0 351 aa11.76□□□□□ -0.53
SMC5-201ENST00000361138 JKAMPQ9P055 326 aa11.76□□□□□ -0.53
SMC5-201ENST00000361138 TMEM256Q8N2U0 113 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 TRPM7Q96QT4 1865 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 OSTCQ9NRP0 149 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 SPCS1Q9Y6A9 102 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 H3BTX0 84 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 WNT9BO14905 357 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 CLPSP04118 112 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 NRN1LQ496H8 165 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 ZNF788Q6ZQV5 615 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 MYOFQ9NZM1 2061 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 DLX1P56177 255 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 RNASEH2CQ8TDP1 164 aaKnown RBP11.75□□□□□ -0.53
SMC5-201ENST00000361138 FMC1Q96HJ9 113 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 MC5RP33032 325 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 TIMP3P35625 211 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 NMSQ5H8A3 153 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 ACP7Q6ZNF0 438 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 DNM1P46Q6ZS02 220 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 ZNF441Q8N8Z8 693 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 TMEM208Q9BTX3 173 aa11.75□□□□□ -0.53
SMC5-201ENST00000361138 SPEM2Q0P670 501 aa11.74□□□□□ -0.53
SMC5-201ENST00000361138 SPSB3Q6PJ21 355 aa11.74□□□□□ -0.53
SMC5-201ENST00000361138 NPIPB3Q92617 1050 aa11.74□□□□□ -0.53
SMC5-201ENST00000361138 IFI27L2Q9H2X8 130 aa11.74□□□□□ -0.53
SMC5-201ENST00000361138 J3KRW8 73 aa11.74□□□□□ -0.53
SMC5-201ENST00000361138 LDLRAD2Q5SZI1 272 aa11.74□□□□□ -0.53
SMC5-201ENST00000361138 A0A1W2PRS3 328 aa11.74□□□□□ -0.53
SMC5-201ENST00000361138 HIGD1CA8MV81 97 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms