RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 TMEM190Q8WZ59 177 aa10.21□□□□□ -0.77
VPS29-201ENST00000360579 UFD1Q92890 307 aa10.21□□□□□ -0.77
VPS29-201ENST00000360579 HSD17B10Q99714 261 aaKnown RBP10.21□□□□□ -0.77
VPS29-201ENST00000360579 RARRES2Q99969 163 aa10.21□□□□□ -0.77
VPS29-201ENST00000360579 DAZ1Q9NQZ3 744 aaKnown RBP10.21□□□□□ -0.77
VPS29-201ENST00000360579 RBMX2Q9Y388 322 aaKnown RBP10.21□□□□□ -0.77
VPS29-201ENST00000360579 MPTX1A8MV57 137 aa10.2□□□□□ -0.78
VPS29-201ENST00000360579 MFNGO00587 321 aa10.2□□□□□ -0.78
VPS29-201ENST00000360579 CYB5BO43169 146 aa10.2□□□□□ -0.78
VPS29-201ENST00000360579 HRASP01112 189 aa10.2□□□□□ -0.78
VPS29-201ENST00000360579 CTXN2P0C2S0 81 aa10.2□□□□□ -0.78
VPS29-201ENST00000360579 MED14OSP0DP75 135 aa10.2□□□□□ -0.78
VPS29-201ENST00000360579 CRHBPP24387 322 aa10.2□□□□□ -0.78
VPS29-201ENST00000360579 PTBP1P26599 531 aaKnown RBP eCLIP10.2□□□□□ -0.78
VPS29-201ENST00000360579 FCGR2BP31994 310 aaPredicted RBP10.2□□□□□ -0.78
VPS29-201ENST00000360579 CMC4P56277 68 aaPredicted RBP10.2□□□□□ -0.78
VPS29-201ENST00000360579 TRAM1Q15629 374 aa10.2□□□□□ -0.78
VPS29-201ENST00000360579 LAIR2Q6ISS4 152 aa10.2□□□□□ -0.78
VPS29-201ENST00000360579 OR10R2Q8NGX6 335 aa10.2□□□□□ -0.78
VPS29-201ENST00000360579 ZNF502Q8TBZ5 544 aa10.2□□□□□ -0.78
VPS29-201ENST00000360579 AIFM2Q9BRQ8 373 aa10.2□□□□□ -0.78
VPS29-201ENST00000360579 CSTL1Q9H114 145 aa10.2□□□□□ -0.78
VPS29-201ENST00000360579 FKBP14Q9NWM8 211 aa10.2□□□□□ -0.78
VPS29-201ENST00000360579 DNAH17Q9UFH2 4485 aa10.2□□□□□ -0.78
VPS29-201ENST00000360579 OR2W1Q9Y3N9 320 aa10.2□□□□□ -0.78
VPS29-201ENST00000360579 DNAH11Q96DT5 4516 aa10.19□□□□□ -0.78
VPS29-201ENST00000360579 IGHV3-35A0A0C4DH35 117 aa10.19□□□□□ -0.78
VPS29-201ENST00000360579 TMEM272A0A1B0GTI8 110 aa10.19□□□□□ -0.78
VPS29-201ENST00000360579 A0A1B0GW64 132 aa10.19□□□□□ -0.78
VPS29-201ENST00000360579 HLA-DQB1P01920 261 aa10.19□□□□□ -0.78
VPS29-201ENST00000360579 HIST1H1DP16402 221 aaKnown RBP10.19□□□□□ -0.78
VPS29-201ENST00000360579 GNB3P16520 340 aa10.19□□□□□ -0.78
VPS29-201ENST00000360579 HLA-GP17693 338 aa10.19□□□□□ -0.78
VPS29-201ENST00000360579 PSMA1P25786 263 aaKnown RBP10.19□□□□□ -0.78
VPS29-201ENST00000360579 ADMP35318 185 aa10.19□□□□□ -0.78
VPS29-201ENST00000360579 RPL30P62888 115 aaKnown RBP10.19□□□□□ -0.78
VPS29-201ENST00000360579 IRF3Q14653 427 aa10.19□□□□□ -0.78
VPS29-201ENST00000360579 ARL6IP1Q15041 203 aa10.19□□□□□ -0.78
VPS29-201ENST00000360579 LIPKQ5VXJ0 399 aa10.19□□□□□ -0.78
VPS29-201ENST00000360579 OR5B3Q8NH48 314 aa10.19□□□□□ -0.78
VPS29-201ENST00000360579 OR4A5Q8NH83 315 aa10.19□□□□□ -0.78
VPS29-201ENST00000360579 TCTEX1D2Q8WW35 142 aa10.19□□□□□ -0.78
VPS29-201ENST00000360579 TMEM203Q969S6 136 aa10.19□□□□□ -0.78
VPS29-201ENST00000360579 V9GY05 133 aa10.19□□□□□ -0.78
VPS29-201ENST00000360579 ABCA13Q86UQ4 5058 aa10.19□□□□□ -0.78
VPS29-201ENST00000360579 DYNC1H1Q14204 4646 aaKnown RBP10.18□□□□□ -0.78
VPS29-201ENST00000360579 A0A075B6Q4 140 aa10.18□□□□□ -0.78
VPS29-201ENST00000360579 C11orf94C9JXX5 98 aa10.18□□□□□ -0.78
VPS29-201ENST00000360579 J3QRK9 145 aa10.18□□□□□ -0.78
VPS29-201ENST00000360579 TGOLN2O43493 480 aa10.18□□□□□ -0.78
VPS29-201ENST00000360579 REG1AP05451 166 aa10.18□□□□□ -0.78
VPS29-201ENST00000360579 DTYMKP23919 212 aa10.18□□□□□ -0.78
VPS29-201ENST00000360579 TMEM91Q6ZNR0 172 aa10.18□□□□□ -0.78
VPS29-201ENST00000360579 CD300LFQ8TDQ1 290 aa10.18□□□□□ -0.78
VPS29-201ENST00000360579 VN1R17PQ8TDU5 208 aa10.18□□□□□ -0.78
VPS29-201ENST00000360579 SRSF8Q9BRL6 282 aaKnown RBP10.18□□□□□ -0.78
VPS29-201ENST00000360579 BET1LQ9NYM9 111 aa10.18□□□□□ -0.78
VPS29-201ENST00000360579 LSM2Q9Y333 95 aaKnown RBP10.18□□□□□ -0.78
VPS29-201ENST00000360579 METTL21EPA6NDL7 271 aa10.17□□□□□ -0.78
VPS29-201ENST00000360579 RAB27BO00194 218 aa10.17□□□□□ -0.78
VPS29-201ENST00000360579 NDUFA4O00483 81 aa10.17□□□□□ -0.78
VPS29-201ENST00000360579 S1PR2O95136 353 aa10.17□□□□□ -0.78
VPS29-201ENST00000360579 IGLV2-14P01704 120 aa10.17□□□□□ -0.78
VPS29-201ENST00000360579 GNAO1P09471 354 aa10.17□□□□□ -0.78
VPS29-201ENST00000360579 CALRP27797 417 aaKnown RBP10.17□□□□□ -0.78
VPS29-201ENST00000360579 SPSB3Q6PJ21 355 aa10.17□□□□□ -0.78
VPS29-201ENST00000360579 ZNF66Q6ZN08 573 aa10.17□□□□□ -0.78
VPS29-201ENST00000360579 GVQW1Q8N7I0 195 aa10.17□□□□□ -0.78
VPS29-201ENST00000360579 OR11H2Q8NH07 326 aa10.17□□□□□ -0.78
VPS29-201ENST00000360579 BSCL2Q96G97 398 aaPredicted RBP10.17□□□□□ -0.78
VPS29-201ENST00000360579 ATP6V0BQ99437 205 aa10.17□□□□□ -0.78
VPS29-201ENST00000360579 SPATA2Q9UM82 520 aa10.17□□□□□ -0.78
VPS29-201ENST00000360579 IGKV1D-8A0A087WSZ0 117 aa10.16□□□□□ -0.78
VPS29-201ENST00000360579 IGLL5B9A064 214 aa10.16□□□□□ -0.78
VPS29-201ENST00000360579 K7EMT4 169 aa10.16□□□□□ -0.78
VPS29-201ENST00000360579 RPA2P15927 270 aa10.16□□□□□ -0.78
VPS29-201ENST00000360579 RAB6AP20340 208 aa10.16□□□□□ -0.78
VPS29-201ENST00000360579 NFYAP23511 347 aaPredicted RBP10.16□□□□□ -0.78
VPS29-201ENST00000360579 MFAP2P55001 183 aa10.16□□□□□ -0.78
VPS29-201ENST00000360579 OR2B8PP59922 312 aa10.16□□□□□ -0.78
VPS29-201ENST00000360579 PLA2G7Q13093 441 aa10.16□□□□□ -0.78
VPS29-201ENST00000360579 HES5Q5TA89 166 aa10.16□□□□□ -0.78
VPS29-201ENST00000360579 SSX9Q7RTT3 188 aa10.16□□□□□ -0.78
VPS29-201ENST00000360579 APRG1Q8IVJ8 170 aa10.16□□□□□ -0.78
VPS29-201ENST00000360579 MFSD4AQ8N468 514 aa10.16□□□□□ -0.78
VPS29-201ENST00000360579 HRASLSQ9HDD0 168 aa10.16□□□□□ -0.78
VPS29-201ENST00000360579 APLNQ9ULZ1 77 aa10.16□□□□□ -0.78
VPS29-201ENST00000360579 IGLC7A0M8Q6 106 aa10.15□□□□□ -0.78
VPS29-201ENST00000360579 OR2T8A6NH00 312 aa10.15□□□□□ -0.78
VPS29-201ENST00000360579 PTGES3LE9PB15 166 aa10.15□□□□□ -0.78
VPS29-201ENST00000360579 MRPS14O60783 128 aaKnown RBP10.15□□□□□ -0.78
VPS29-201ENST00000360579 CTSDP07339 412 aaPredicted RBP10.15□□□□□ -0.78
VPS29-201ENST00000360579 FGF2P09038 288 aa10.15□□□□□ -0.78
VPS29-201ENST00000360579 EIF4EBP1Q13541 118 aaPredicted RBP10.15□□□□□ -0.78
VPS29-201ENST00000360579 TIMM50Q3ZCQ8 353 aa10.15□□□□□ -0.78
VPS29-201ENST00000360579 THOC7Q6I9Y2 204 aaKnown RBP10.15□□□□□ -0.78
VPS29-201ENST00000360579 HSD17B13Q7Z5P4 300 aaPredicted RBP10.15□□□□□ -0.78
VPS29-201ENST00000360579 C20orf24Q9BUV8 137 aa10.15□□□□□ -0.78
VPS29-201ENST00000360579 COMMD5Q9GZQ3 224 aa10.15□□□□□ -0.78
VPS29-201ENST00000360579 DCSTAMPQ9H295 470 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms