RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 VAX2Q9UIW0 290 aa12.18□□□□□ -0.46
GABPB1-202ENST00000359031 ZNF257Q9Y2Q1 563 aa12.18□□□□□ -0.46
GABPB1-202ENST00000359031 PUS1Q9Y606 427 aaKnown RBP eCLIP12.18□□□□□ -0.46
GABPB1-202ENST00000359031 TRBV23-1A0A0A0MS06 115 aa12.17□□□□□ -0.46
GABPB1-202ENST00000359031 ZFP92A6NM28 416 aa12.17□□□□□ -0.46
GABPB1-202ENST00000359031 COLCA2A8K830 154 aa12.17□□□□□ -0.46
GABPB1-202ENST00000359031 NDUFS6O75380 124 aaKnown RBP12.17□□□□□ -0.46
GABPB1-202ENST00000359031 FSTL3O95633 263 aa12.17□□□□□ -0.46
GABPB1-202ENST00000359031 FGF8P55075 233 aaPredicted RBP12.17□□□□□ -0.46
GABPB1-202ENST00000359031 ACOT6Q3I5F7 207 aaPredicted RBP12.17□□□□□ -0.46
GABPB1-202ENST00000359031 SLC24A4Q8NFF2 622 aa12.17□□□□□ -0.46
GABPB1-202ENST00000359031 OSR1Q8TAX0 266 aaPredicted RBP12.17□□□□□ -0.46
GABPB1-202ENST00000359031 LHX4Q969G2 390 aa12.17□□□□□ -0.46
GABPB1-202ENST00000359031 C20orf24Q9BUV8 137 aa12.17□□□□□ -0.46
GABPB1-202ENST00000359031 BET1LQ9NYM9 111 aa12.17□□□□□ -0.46
GABPB1-202ENST00000359031 MYO9AB2RTY4 2548 aa12.17□□□□□ -0.46
GABPB1-202ENST00000359031 YLPM1P49750 1951 aaKnown RBP12.17□□□□□ -0.46
GABPB1-202ENST00000359031 A0A087X0M5 115 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 A0A1B0GX30 115 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 A1L4Q6 167 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 H3BQ15 152 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 UPK2O00526 184 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 RRHO14718 337 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 PLAUP00749 431 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 FOLR2P14207 255 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 GNLYP22749 145 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 NPY1RP25929 384 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 AKR1C3P42330 323 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 DLX6P56179 175 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 ADORA2A-AS1P86434 159 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 ZNF672Q499Z4 452 aaPredicted RBP12.16□□□□□ -0.46
GABPB1-202ENST00000359031 TMEM155Q4W5P6 130 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 AVPI1Q5T686 147 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 RBMS3Q6XE24 437 aaKnown RBP12.16□□□□□ -0.46
GABPB1-202ENST00000359031 SLC35E3Q7Z769 313 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 MUC15Q8N387 334 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 NIPSNAP3BQ9BS92 247 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 MRPL20Q9BYC9 149 aaKnown RBP12.16□□□□□ -0.46
GABPB1-202ENST00000359031 SLC25A22Q9H936 323 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 KCNIP2Q9NS61 270 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 FKBP11Q9NYL4 201 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 MLXQ9UH92 298 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 OR51B2Q9Y5P1 312 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 DOCK11Q5JSL3 2073 aa12.16□□□□□ -0.46
GABPB1-202ENST00000359031 USP9YO00507 2555 aaPredicted RBP12.16□□□□□ -0.46
GABPB1-202ENST00000359031 CYB5BO43169 146 aa12.15□□□□□ -0.46
GABPB1-202ENST00000359031 PPOXP50336 477 aa12.15□□□□□ -0.46
GABPB1-202ENST00000359031 PRCDQ00LT1 54 aa12.15□□□□□ -0.46
GABPB1-202ENST00000359031 Q8N7P7 452 aa12.15□□□□□ -0.46
GABPB1-202ENST00000359031 TMEM186Q96B77 213 aa12.15□□□□□ -0.46
GABPB1-202ENST00000359031 TVP23CQ96ET8 276 aa12.15□□□□□ -0.46
GABPB1-202ENST00000359031 MANBALQ9NQG1 85 aa12.15□□□□□ -0.46
GABPB1-202ENST00000359031 ZNRD1Q9P1U0 126 aa12.15□□□□□ -0.46
GABPB1-202ENST00000359031 ICE1Q9Y2F5 2266 aa12.15□□□□□ -0.46
GABPB1-202ENST00000359031 FNDC10F2Z333 226 aa12.15□□□□□ -0.47
GABPB1-202ENST00000359031 H0YJW9 148 aa12.15□□□□□ -0.47
GABPB1-202ENST00000359031 J3QR06 171 aa12.15□□□□□ -0.47
GABPB1-202ENST00000359031 SIAH2O43255 324 aa12.15□□□□□ -0.47
GABPB1-202ENST00000359031 IFNA4P05014 189 aa12.15□□□□□ -0.47
GABPB1-202ENST00000359031 OPRK1P41145 380 aa12.15□□□□□ -0.47
GABPB1-202ENST00000359031 ZNF137PP52743 207 aa12.15□□□□□ -0.47
GABPB1-202ENST00000359031 CEBPGP53567 150 aa12.15□□□□□ -0.47
GABPB1-202ENST00000359031 ATP5IP56385 69 aaPredicted RBP12.15□□□□□ -0.47
GABPB1-202ENST00000359031 FAM90A2PQ658T7 463 aa12.15□□□□□ -0.47
GABPB1-202ENST00000359031 OR5AN1Q8NGI8 311 aa12.15□□□□□ -0.47
GABPB1-202ENST00000359031 OR10X1Q8NGY0 326 aa12.15□□□□□ -0.47
GABPB1-202ENST00000359031 CA5BP1Q8WTZ4 195 aa12.15□□□□□ -0.47
GABPB1-202ENST00000359031 TMEM170AQ8WVE7 144 aa12.15□□□□□ -0.47
GABPB1-202ENST00000359031 TMEM204Q9BSN7 226 aa12.15□□□□□ -0.47
GABPB1-202ENST00000359031 PLEKHA3Q9HB20 300 aa12.15□□□□□ -0.47
GABPB1-202ENST00000359031 ARFGEF3Q5TH69 2177 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 SPTAN1Q13813 2472 aaKnown RBP12.14□□□□□ -0.47
GABPB1-202ENST00000359031 A0A087WWC5 75 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 SMCO3A2RU48 225 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 SEC14L6B5MCN3 397 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 KBTBD11O94819 623 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 MT-ND4LP03901 98 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 IGKV1-16P04430 117 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 FBP1P09467 338 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 CTRB1P17538 263 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 GRNP28799 593 aaKnown RBP12.14□□□□□ -0.47
GABPB1-202ENST00000359031 CDC34P49427 236 aaPredicted RBP12.14□□□□□ -0.47
GABPB1-202ENST00000359031 ERVFRD-1P60508 538 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 HNF4GQ14541 408 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 TMEM177Q53S58 311 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 CTRB2Q6GPI1 263 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 TREML4Q6UXN2 200 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 PDPNQ86YL7 162 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 ABHD12Q8N2K0 398 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 OR5B3Q8NH48 314 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 OR9G1Q8NH87 305 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 RAB1CQ92928 201 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 HIST1H2BAQ96A08 127 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 HARBI1Q96MB7 349 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 PCGF1Q9BSM1 259 aa12.14□□□□□ -0.47
GABPB1-202ENST00000359031 RP1L1Q8IWN7 2480 aaPredicted RBP12.13□□□□□ -0.47
GABPB1-202ENST00000359031 CRYBA1P05813 215 aa12.13□□□□□ -0.47
GABPB1-202ENST00000359031 SAA1P0DJI8 122 aaPredicted RBP12.13□□□□□ -0.47
GABPB1-202ENST00000359031 IL3RAP26951 378 aa12.13□□□□□ -0.47
GABPB1-202ENST00000359031 PNRC1Q12796 327 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms