RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 GCSAMQ8N6F7 178 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 ARPC1AQ92747 370 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 UPK3AO75631 287 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 SP9P0CG40 484 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 SRIP30626 198 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 FAM201AQ5SY85 155 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 LHFPL4Q7Z7J7 247 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 CLDND2Q8NHS1 167 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 DNAJC4Q9NNZ3 241 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 MYO16Q9Y6X6 1858 aa8.34□□□□□ -1.07
CHD3-202ENST00000358181 TRAV1-2A0A0B4J238 106 aa8.34□□□□□ -1.08
CHD3-202ENST00000358181 KLK8O60259 260 aa8.34□□□□□ -1.08
CHD3-202ENST00000358181 APOBEC3AP31941 199 aaPredicted RBP8.34□□□□□ -1.08
CHD3-202ENST00000358181 IFI27P40305 119 aaPredicted RBP8.34□□□□□ -1.08
CHD3-202ENST00000358181 RIMKLAQ8IXN7 391 aa8.34□□□□□ -1.08
CHD3-202ENST00000358181 OSR1Q8TAX0 266 aaPredicted RBP8.34□□□□□ -1.08
CHD3-202ENST00000358181 ZNF385AQ96PM9 386 aaKnown RBP8.34□□□□□ -1.08
CHD3-202ENST00000358181 MS4A6AQ9H2W1 248 aa8.34□□□□□ -1.08
CHD3-202ENST00000358181 DKK4Q9UBT3 224 aa8.34□□□□□ -1.08
CHD3-202ENST00000358181 TRAV40A0A0B4J280 105 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 LIPT2A6NK58 231 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 KCNS1Q96KK3 526 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 RP1P56715 2156 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 COL18A1P39060 1754 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 M0QZK8 103 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 BSPH1Q075Z2 132 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 TEX45Q8NA69 505 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 SCARF2Q96GP6 870 aaPredicted RBP8.33□□□□□ -1.08
CHD3-202ENST00000358181 EPOPA6NHQ4 379 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 F5H768 121 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 CD5LO43866 347 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 IGF2P01344 180 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 C1QCP02747 245 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 FAM27E3Q08E93 113 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 LINC00518Q8N0U6 118 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 ZNF414Q96IQ9 312 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 NPCDR1Q9BY65 106 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 STRCP1A6NGW2 1772 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 SCN8AQ9UQD0 1980 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 GAGE2EQ4V326 116 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 OR8D4Q8NGM9 314 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 NPIPB3Q92617 1050 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 ST20Q9HBF5 79 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 GAGE2DQ9UEU5 116 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 NKAPP1Q8N9T2 125 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 SH3BGRL3Q9H299 93 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 COL4A1P02462 1669 aa8.33□□□□□ -1.08
CHD3-202ENST00000358181 A0A1W2PP11 408 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 NPIPB8E9PQR5 432 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 NPIPB9F8W1W9 429 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 NPIPB7O75200 414 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 GP1BAP07359 652 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 SCTP09683 121 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 CDCP2Q5VXM1 449 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 CTXND1A0A1B0GTU2 59 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 SSBP1Q04837 148 aaKnown RBP8.32□□□□□ -1.08
CHD3-202ENST00000358181 DEFB105AQ8NG35 78 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 SNHG12Q9BXW3 62 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 SLC17A5Q9NRA2 495 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 SPCS1Q9Y6A9 102 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 TMEM50AO95807 157 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 ACTL10Q5JWF8 245 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 LEMD1Q68G75 181 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 SP7Q8TDD2 431 aaPredicted RBP8.32□□□□□ -1.08
CHD3-202ENST00000358181 ZMAT4Q9H898 229 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 ST6GALNAC2Q9UJ37 374 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 AHRRA9YTQ3 701 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 HLA-DRB1P01911 266 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 TMEM219Q86XT9 240 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 CBLN2Q8IUK8 224 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 GPR146Q96CH1 333 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 PLAC1Q9HBJ0 212 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 MGST3O14880 152 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 RCHY1Q96PM5 261 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 F5P12259 2224 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 FOXA3P55318 350 aaPredicted RBP8.32□□□□□ -1.08
CHD3-202ENST00000358181 POC1AQ8NBT0 407 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 SF3B5Q9BWJ5 86 aaKnown RBP8.32□□□□□ -1.08
CHD3-202ENST00000358181 FAM206AQ9NX38 181 aa8.32□□□□□ -1.08
CHD3-202ENST00000358181 A0A096LPF7 62 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 TGIF2-C20orf24A0A0A6YYL0 155 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 B9A039 149 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 FUT5Q11128 374 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 SLC25A34Q6PIV7 304 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 RARRES2Q99969 163 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 GGTLC1Q9BX51 225 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 FOLR2P14207 255 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 HAPLN4Q86UW8 402 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 MAPK1IP1LQ8NDC0 245 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 FOCADQ5VW36 1801 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 ZNF561-AS1K7EIQ3 104 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 NCR2O95944 276 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 ZAR1Q86SH2 424 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 LINC00596Q86U02 117 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 hADV29S1A0JD25 119 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 TCRAP04437 139 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 UBE2BP63146 152 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 RPL39P5Q59GN2 51 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 DNM1P46Q6ZS02 220 aa8.31□□□□□ -1.08
CHD3-202ENST00000358181 LCNL1Q6ZST4 164 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms