RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 TMEM241Q24JQ0 296 aa11.77□□□□□ -0.53
NIPAL3-203ENST00000358028 C17orf58Q2M2W7 97 aa11.77□□□□□ -0.53
NIPAL3-203ENST00000358028 ACOT6Q3I5F7 207 aaPredicted RBP11.77□□□□□ -0.53
NIPAL3-203ENST00000358028 RPL39P5Q59GN2 51 aa11.77□□□□□ -0.53
NIPAL3-203ENST00000358028 Q8TCH9 128 aa11.77□□□□□ -0.53
NIPAL3-203ENST00000358028 FAM210BQ96KR6 192 aa11.77□□□□□ -0.53
NIPAL3-203ENST00000358028 GAFA1Q96PS6 74 aa11.77□□□□□ -0.53
NIPAL3-203ENST00000358028 SPOCK3Q9BQ16 436 aa11.77□□□□□ -0.53
NIPAL3-203ENST00000358028 GGACTQ9BVM4 153 aa11.77□□□□□ -0.53
NIPAL3-203ENST00000358028 QTRT1Q9BXR0 403 aaKnown RBP11.77□□□□□ -0.53
NIPAL3-203ENST00000358028 PDZD2O15018 2839 aa11.77□□□□□ -0.53
NIPAL3-203ENST00000358028 OTOGQ6ZRI0 2925 aa11.76□□□□□ -0.53
NIPAL3-203ENST00000358028 ELOA3CA0A087WX78 387 aaPredicted RBP11.76□□□□□ -0.53
NIPAL3-203ENST00000358028 SMCO3A2RU48 225 aa11.76□□□□□ -0.53
NIPAL3-203ENST00000358028 C16orf97H3BN30 126 aa11.76□□□□□ -0.53
NIPAL3-203ENST00000358028 CD55P08174 381 aa11.76□□□□□ -0.53
NIPAL3-203ENST00000358028 OR9G9P0C7N8 305 aa11.76□□□□□ -0.53
NIPAL3-203ENST00000358028 ZNF134P52741 427 aa11.76□□□□□ -0.53
NIPAL3-203ENST00000358028 TMEM108Q6UXF1 575 aa11.76□□□□□ -0.53
NIPAL3-203ENST00000358028 SLC16A13Q7RTY0 426 aa11.76□□□□□ -0.53
NIPAL3-203ENST00000358028 LURAP1LQ8IV03 231 aa11.76□□□□□ -0.53
NIPAL3-203ENST00000358028 SMIM7Q9BQ49 75 aa11.76□□□□□ -0.53
NIPAL3-203ENST00000358028 GFOD1Q9NXC2 390 aa11.76□□□□□ -0.53
NIPAL3-203ENST00000358028 WDR83OSQ9Y284 106 aa11.76□□□□□ -0.53
NIPAL3-203ENST00000358028 URGCP-MRPS24S4R325 110 aa11.76□□□□□ -0.53
NIPAL3-203ENST00000358028 C15orf62A8K5M9 175 aa11.75□□□□□ -0.53
NIPAL3-203ENST00000358028 SEC14L6B5MCN3 397 aa11.75□□□□□ -0.53
NIPAL3-203ENST00000358028 SLC31A2O15432 143 aa11.75□□□□□ -0.53
NIPAL3-203ENST00000358028 IGHV3-7P01780 117 aa11.75□□□□□ -0.53
NIPAL3-203ENST00000358028 S100PP25815 95 aa11.75□□□□□ -0.53
NIPAL3-203ENST00000358028 RAB7AP51149 207 aa11.75□□□□□ -0.53
NIPAL3-203ENST00000358028 ERVK-16P61578 105 aa11.75□□□□□ -0.53
NIPAL3-203ENST00000358028 SPINK9Q5DT21 86 aa11.75□□□□□ -0.53
NIPAL3-203ENST00000358028 PRAMEF5Q5TYX0 476 aa11.75□□□□□ -0.53
NIPAL3-203ENST00000358028 DUX4L9Q6RFH8 374 aaPredicted RBP11.75□□□□□ -0.53
NIPAL3-203ENST00000358028 WFDC8Q8IUA0 241 aa11.75□□□□□ -0.53
NIPAL3-203ENST00000358028 LINC01560Q8TB33 94 aa11.75□□□□□ -0.53
NIPAL3-203ENST00000358028 FAM234AQ9H0X4 552 aa11.75□□□□□ -0.53
NIPAL3-203ENST00000358028 OR51M1Q9H341 326 aa11.75□□□□□ -0.53
NIPAL3-203ENST00000358028 DOK5Q9P104 306 aa11.75□□□□□ -0.53
NIPAL3-203ENST00000358028 TRGV10A0A0A0MS01 117 aa11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 KBTBD11-OT1A0A1B0GTJ5 212 aa11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 DEFB108BQ8NET1 73 aa11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 S1PR3Q99500 378 aa11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 SLC25A22Q9H936 323 aa11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 NIT2Q9NQR4 276 aa11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 AKAP9Q99996 3911 aa11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 USF3Q68DE3 2245 aa11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 FABP1P07148 127 aa11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 IRF2P14316 349 aa11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 NDUFA6P56556 154 aa11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 RPS16P62249 146 aaKnown RBP11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 ZNF788Q6ZQV5 615 aa11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 OR4A16Q8NH70 328 aa11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 DDB2Q92466 427 aa11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 RAB1CQ92928 201 aa11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 RAB24Q969Q5 203 aa11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 CCL13Q99616 98 aa11.74□□□□□ -0.53
NIPAL3-203ENST00000358028 TANC2Q9HCD6 1990 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 DSCAMO60469 2012 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 DPRXA6NFQ7 191 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 HIST1H2BKO60814 126 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 VENTXO95231 258 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 GYPAP02724 150 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 HIST1H2BJP06899 126 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 HIST1H2BOP23527 126 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 CD1BP29016 333 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 S100A2P29034 98 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 HIST1H2BBP33778 126 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 HIST1H2BDP58876 126 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 HIST1H2BCP62807 126 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 HIST2H2BEQ16778 126 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 BSXQ3C1V8 233 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 TMEM30BQ3MIR4 351 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 CT45A1Q5HYN5 189 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 NCMAPQ5T1S8 102 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 UTF1Q5T230 341 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 TEX36Q5VZQ5 186 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 SSX9Q7RTT3 188 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 TCF23Q7RTU1 214 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 CT45A3Q8NHU0 189 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 HIST1H2BHQ93079 126 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 LEAP2Q969E1 77 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 NEIL1Q96FI4 390 aaPredicted RBP11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 HIST1H2BNQ99877 126 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 HIST1H2BMQ99879 126 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 KCNIP2Q9NS61 270 aa11.73□□□□□ -0.53
NIPAL3-203ENST00000358028 ZNF729A6NN14 1252 aaPredicted RBP11.72□□□□□ -0.53
NIPAL3-203ENST00000358028 TRGC2P03986 189 aa11.72□□□□□ -0.53
NIPAL3-203ENST00000358028 THBDP07204 575 aa11.72□□□□□ -0.53
NIPAL3-203ENST00000358028 CDC34P49427 236 aaPredicted RBP11.72□□□□□ -0.53
NIPAL3-203ENST00000358028 C1orf229Q6ZS94 237 aaPredicted RBP11.72□□□□□ -0.53
NIPAL3-203ENST00000358028 FAM216BQ8N7L0 139 aa11.72□□□□□ -0.53
NIPAL3-203ENST00000358028 OR4S2Q8NH73 311 aa11.72□□□□□ -0.53
NIPAL3-203ENST00000358028 DSCAML1Q8TD84 2053 aa11.72□□□□□ -0.53
NIPAL3-203ENST00000358028 PYGO2Q9BRQ0 406 aa11.72□□□□□ -0.53
NIPAL3-203ENST00000358028 GSN-AS1Q9NRJ2 163 aa11.72□□□□□ -0.53
NIPAL3-203ENST00000358028 GAR1Q9NY12 217 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms