RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 OR10S1Q8NGN2 331 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 CBLN4Q9NTU7 201 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 DPM3Q9P2X0 92 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 A0A1B0GVG6 124 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 A0A1W2PP11 408 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 F8VVB4 439 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 F8VWA3 439 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 BTG1P62324 171 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 SS18Q15532 418 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 ZNF474Q6S9Z5 364 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-203ENST00000357654 PRSS42Q7Z5A4 293 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 DDA1Q9BW61 102 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 ZNF831Q5JPB2 1677 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 COL24A1Q17RW2 1714 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 SLC17A3O00476 420 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 P2RY1P47900 373 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 GZMMP51124 257 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 RUNX1Q01196 453 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 FUT5Q11128 374 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 KLRD1Q13241 179 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 TMEM174Q8WUU8 243 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 C1orf159Q96HA4 380 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 FER1L6Q2WGJ9 1857 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 MYH3P11055 1940 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 IGHV4-4A0A075B6R2 117 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 NDPQ00604 133 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 NRG4Q8WWG1 115 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 FIZ1Q96SL8 496 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 C1QTNF4Q9BXJ3 329 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 IGHV3-16A0A0C4DH30 117 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 ODAMA1E959 279 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 C7orf77A4D0Y5 90 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 DUSP14O95147 198 aaKnown RBP4.92□□□□□ -1.62
BRCA1-203ENST00000357654 TRGC2P03986 189 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 CEACAM1P13688 526 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 DLL3Q9NYJ7 618 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 LTBP4Q8N2S1 1624 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 DDX60Q8IY21 1712 aaKnown RBP4.92□□□□□ -1.62
BRCA1-203ENST00000357654 A0A0J9YW62 118 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 CCL1P22362 96 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 TNFRSF12AQ9NP84 129 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 NRN1Q9NPD7 142 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 TRGV11A0A075B6L2 103 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 A0A087X0M5 115 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 A0A1B0GX30 115 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 MSGN1A6NI15 193 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 SSBP2P81877 361 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-203ENST00000357654 ERCC8Q13216 396 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 LINC00596Q86U02 117 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 GPHB5Q86YW7 130 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 FAM216BQ8N7L0 139 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 RNF166Q96A37 237 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-203ENST00000357654 MRPL18Q9H0U6 180 aaKnown RBP4.92□□□□□ -1.62
BRCA1-203ENST00000357654 IL20Q9NYY1 176 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 TRAV41A0A0B4J266 112 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 ITGB1BP1O14713 200 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 KLF4O43474 513 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 RHOGP84095 191 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 VMO1Q7Z5L0 202 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 ZNF414Q96IQ9 312 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 VKORC1Q9BQB6 163 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 SLC50A1Q9BRV3 221 aa4.92□□□□□ -1.62
BRCA1-203ENST00000357654 TMEM8BA6NDV4 472 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 PTP4A3O75365 173 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 GAGE2EQ4V326 116 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 AWAT1Q58HT5 328 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 PIP4P2Q8N4L2 257 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 OR5P3Q8WZ94 311 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 GAGE2DQ9UEU5 116 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 KDM3BQ7LBC6 1761 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 CHD4Q14839 1912 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 SRIP30626 198 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 CRYBB2P43320 205 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 CEACAM21Q3KPI0 293 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 C9orf40Q8IXQ3 194 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 C15orf53Q8NAA6 179 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 LINC01555Q8NAE3 123 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 SCMH1Q96GD3 660 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 ZP3P21754 424 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 ORMDL2Q53FV1 153 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 RNASE6Q93091 150 aaKnown RBP4.91□□□□□ -1.62
BRCA1-203ENST00000357654 PILRBQ9UKJ0 227 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 ZNF646O15015 1829 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-203ENST00000357654 A0A0J9YY99 117 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 GP1BAP07359 652 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 PSG1P11464 419 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 FGF9P31371 208 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-203ENST00000357654 PAX9P55771 341 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 EGR4Q05215 589 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 RIMKLAQ8IXN7 391 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 IGHV4-28A0A0C4DH34 117 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 CTXND1A0A1B0GTU2 59 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 M0R2P5 195 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 FCN3O75636 299 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 MPC2O95563 127 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 Q6ZNB5 142 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 CYS1Q717R9 158 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 WDR34Q96EX3 536 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 SPEF2Q9C093 1822 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 TCRBV5S2A0A599 114 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms