RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 Q6ZN92 141 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 OR2M7Q8NG81 312 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 TRAV38-1A0A0B4J264 116 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 IGHV1-69-2A0A0G2JMI3 117 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 A0A1W2PR80 420 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 A0A1W2PS18 150 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 PRSS46E5RG02 174 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 CCL25O15444 150 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 RAMP3O60896 148 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 MRPL33O75394 65 aaKnown RBP8.86□□□□□ -0.99
CAPN3-205ENST00000357568 PPBPP02775 128 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 P04436 131 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 CD33P20138 364 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 S100A7P31151 101 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 IER3P46695 156 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 TFPI2P48307 235 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 HTD2P86397 168 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 PLGLB1Q02325 96 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 PSG7Q13046 419 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 SLC35E4Q6ICL7 350 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 TMEM136Q6ZRR5 245 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 WIPF2Q8TF74 440 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-205ENST00000357568 GALMQ96C23 342 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 ZNF488Q96MN9 340 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 GGTLC1Q9BX51 225 aa8.86□□□□□ -0.99
CAPN3-205ENST00000357568 DPRXA6NFQ7 191 aa8.85□□□□□ -0.99
CAPN3-205ENST00000357568 OOEPA6NGQ2 149 aa8.85□□□□□ -0.99
CAPN3-205ENST00000357568 AMY1AP04745 511 aa8.85□□□□□ -0.99
CAPN3-205ENST00000357568 CEACAM8P31997 349 aaPredicted RBP8.85□□□□□ -0.99
CAPN3-205ENST00000357568 AMTP48728 403 aa8.85□□□□□ -0.99
CAPN3-205ENST00000357568 RPL30P62888 115 aaKnown RBP8.85□□□□□ -0.99
CAPN3-205ENST00000357568 RPL31P62899 125 aaKnown RBP8.85□□□□□ -0.99
CAPN3-205ENST00000357568 PLP2Q04941 152 aa8.85□□□□□ -0.99
CAPN3-205ENST00000357568 TREML4Q6UXN2 200 aa8.85□□□□□ -0.99
CAPN3-205ENST00000357568 OR2D2Q9H210 308 aa8.85□□□□□ -0.99
CAPN3-205ENST00000357568 C12orf49Q9H741 205 aa8.85□□□□□ -0.99
CAPN3-205ENST00000357568 IGHV2-70DA0A0C4DH43 119 aa8.85□□□□□ -0.99
CAPN3-205ENST00000357568 PGPEP1LA6NFU8 196 aa8.85□□□□□ -0.99
CAPN3-205ENST00000357568 KLK10O43240 276 aa8.85□□□□□ -0.99
CAPN3-205ENST00000357568 TSPOP30536 169 aa8.85□□□□□ -0.99
CAPN3-205ENST00000357568 BRWD1-AS2P59051 145 aa8.85□□□□□ -0.99
CAPN3-205ENST00000357568 YRDCQ86U90 279 aaKnown RBP8.85□□□□□ -0.99
CAPN3-205ENST00000357568 SPACA3Q8IXA5 215 aa8.85□□□□□ -0.99
CAPN3-205ENST00000357568 C5orf30Q96GV9 206 aa8.85□□□□□ -0.99
CAPN3-205ENST00000357568 LSM4Q9Y4Z0 139 aaKnown RBP8.85□□□□□ -0.99
CAPN3-205ENST00000357568 YTHDF2Q9Y5A9 579 aaKnown RBP8.85□□□□□ -0.99
CAPN3-205ENST00000357568 DMXL1Q9Y485 3027 aa8.85□□□□□ -0.99
CAPN3-205ENST00000357568 IGHV2OR16-5A0A0B4J2B6 119 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 ISLRO14498 428 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 CELA2AP08217 269 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 GFRA1P56159 465 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 EDDM3BP56851 147 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 ZNF816Q0VGE8 651 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-205ENST00000357568 RTL8BQ17RB0 113 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 PPP1R32Q7Z5V6 425 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 NIT1Q86X76 327 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 APH1AQ96BI3 265 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 MGST2Q99735 147 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 HES4Q9HCC6 221 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 EML6Q6ZMW3 1958 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 TRGV8A0A0C4DH27 118 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 C17orf98A8MV24 154 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 C3orf79P0CE67 100 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 SELENOVP59797 346 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 GABRA6Q16445 453 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 CFAP161Q6P656 301 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 VASH2Q86V25 355 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 ST6GALNAC3Q8NDV1 305 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 NUDT10Q8NFP7 164 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 PRRG4Q9BZD6 226 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 TMEM167BQ9NRX6 74 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 C1RLQ9NZP8 487 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 NAT8BQ9UHF3 227 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 RNF114Q9Y508 228 aa8.84□□□□□ -0.99
CAPN3-205ENST00000357568 KNTC1P50748 2209 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 TRAV30A0A087WSZ9 112 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 F2Z2F3 143 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 VDAC2P45880 294 aaPredicted RBP8.83□□□□□ -1
CAPN3-205ENST00000357568 ZNF83P51522 516 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 GCSAMLQ5JQS6 135 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 STUMQ69YW2 141 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 TRAT1Q6PIZ9 186 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 ABHD3Q8WU67 409 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 CORO2AQ92828 525 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 FER1L6-AS2Q96M78 137 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 COMMD5Q9GZQ3 224 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 CNOT1A5YKK6 2376 aaKnown RBP8.83□□□□□ -1
CAPN3-205ENST00000357568 TRAV9-2A0A087WT02 112 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 SMIM27A0A1W2PRY6 76 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 SLC17A3O00476 420 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 RHBDL1O75783 438 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 TRAPPC6AO75865 159 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 NGFP01138 241 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 CCNOP22674 350 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 TNFSF4P23510 183 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 THBS3P49746 956 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 KLF5Q13887 457 aaPredicted RBP8.83□□□□□ -1
CAPN3-205ENST00000357568 FAM162BQ5T6X4 162 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 GCNT2Q8N0V5 402 aa8.83□□□□□ -1
CAPN3-205ENST00000357568 SCCPDHQ8NBX0 429 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms