RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 SCGB1D4Q6XE38 83 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 PDPNQ86YL7 162 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 ZNF716A6NP11 495 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 LYZP61626 148 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 HOXA4Q00056 320 aaPredicted RBP11.91□□□□□ -0.5
SREBF1-202ENST00000355815 ZNF71Q9NQZ8 489 aaPredicted RBP11.91□□□□□ -0.5
SREBF1-202ENST00000355815 DLL3Q9NYJ7 618 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 A0A1B0GWJ7 208 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 K7N7A8 449 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 NAPSAO96009 420 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 CD55P08174 381 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 SSTR5P35346 364 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 GPR6P46095 362 aaPredicted RBP11.91□□□□□ -0.5
SREBF1-202ENST00000355815 PMCHL1Q16048 86 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 CLEC5AQ9NY25 188 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 WNK1Q9H4A3 2382 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 H0Y980 276 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 NPSP0C0P6 89 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 ZGRF1Q86YA3 2104 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 TGIF2LYQ8IUE0 185 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 C5orf17Q8NAS9 161 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 OR1L1Q8NH94 360 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 MPC1Q9Y5U8 109 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 CELSR3Q9NYQ7 3312 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 HAND1O96004 215 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 ZDHHC16Q969W1 377 aa11.91□□□□□ -0.5
SREBF1-202ENST00000355815 CEP295Q9C0D2 2601 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 DNPH1O43598 174 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 LILRA1O75019 489 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 OR2H2O95918 312 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 GZMBP10144 247 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 OR2V2Q96R30 315 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 KIAA1549LQ6ZVL6 1849 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 NUP210Q8TEM1 1887 aaPredicted RBP11.9□□□□□ -0.5
SREBF1-202ENST00000355815 LOC102723996A0A087X1L8 192 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 LY6G6EA0A0G2JKS1 128 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 LOC107984156A0A0G2JMH3 177 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 PPIAL4DF5H284 164 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 ZFP36L1Q07352 338 aaKnown RBP11.9□□□□□ -0.5
SREBF1-202ENST00000355815 RIPPLY2Q5TAB7 128 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 C1QL4Q86Z23 238 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 ARL17AQ8IVW1 177 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 OR5R1Q8NH85 324 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 LEAP2Q969E1 77 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 SAP30LQ9HAJ7 183 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 NRN1Q9NPD7 142 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 HILPDAQ9Y5L2 63 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 U3KQA8 63 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 MUC6Q6W4X9 2439 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 LTBP2Q14767 1821 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 A0A087WWC5 75 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 J3KRW8 73 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 PRB4P10163 310 aaPredicted RBP11.9□□□□□ -0.5
SREBF1-202ENST00000355815 TFF3Q07654 80 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 KCNMB1Q16558 191 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 ZNF841Q6ZN19 808 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 WDYHV1Q96HA8 205 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 PGLYRP4Q96LB8 373 aa11.9□□□□□ -0.5
SREBF1-202ENST00000355815 TMEM250H0YL14 139 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 J3QT63 122 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 REG1BP48304 166 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 TMEM97Q5BJF2 176 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 GGNQ86UU5 652 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 UFC1Q9Y3C8 167 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 TRGV10A0A0A0MS01 117 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 SCO2A0A1W2PP80 73 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 GNG7O60262 68 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 FABP2P12104 132 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 ADMP35318 185 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 MST1LQ2TV78 715 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 FAM89BQ8N5H3 189 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 TMEM56Q96MV1 263 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 DCTN5Q9BTE1 182 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 ZNF703Q9H7S9 590 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-202ENST00000355815 TECTAO75443 2155 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 MARCH11A6NNE9 402 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 HLA-DQA1P01909 254 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 HIST1H1EP10412 219 aaKnown RBP11.89□□□□□ -0.51
SREBF1-202ENST00000355815 MAS1LP35410 378 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 MRPS11P82912 194 aaKnown RBP11.89□□□□□ -0.51
SREBF1-202ENST00000355815 SRSF9Q13242 221 aaKnown RBP eCLIP11.89□□□□□ -0.514e-8■■■□□ 18.5
SREBF1-202ENST00000355815 RSPO1Q2MKA7 263 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-202ENST00000355815 C1orf185Q5T7R7 199 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 C19orf35Q6ZS72 473 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 SNHG12Q9BXW3 62 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 DECR2Q9NUI1 292 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 MT-ND6P03923 174 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 COX19Q49B96 90 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 ACSF3Q4G176 576 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-202ENST00000355815 TMEM108Q6UXF1 575 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 C1orf147Q96MC9 270 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-202ENST00000355815 C2orf88Q9BSF0 95 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 RNF122Q9H9V4 155 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 ASCL3Q9NQ33 180 aa11.89□□□□□ -0.51
SREBF1-202ENST00000355815 TRAV17A0A0B4J275 112 aa11.88□□□□□ -0.51
SREBF1-202ENST00000355815 S1PR2O95136 353 aa11.88□□□□□ -0.51
SREBF1-202ENST00000355815 ADH4P08319 380 aa11.88□□□□□ -0.51
SREBF1-202ENST00000355815 S100A4P26447 101 aaKnown RBP11.88□□□□□ -0.51
SREBF1-202ENST00000355815 SRSF6Q13247 344 aaKnown RBP11.88□□□□□ -0.51
SREBF1-202ENST00000355815 TMEM116Q8NCL8 245 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms