RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 C9JQL5 133 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 LYZP61626 148 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 NRN1LQ496H8 165 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 Q6ZS92 163 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 CYP2G1PQ6ZSU1 146 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 ABHD12Q8N2K0 398 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 SFRP2Q96HF1 295 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 VSIRQ9H7M9 311 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 TMEM140Q9NV12 185 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 CDKN1AP38936 164 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 LINC00469Q8N7U9 141 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 WDR31Q8NA23 367 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 LEAP2Q969E1 77 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 SSBP3Q9BWW4 388 aaPredicted RBP10.38□□□□□ -0.75
COLCA1-201ENST00000355430 NOTCH4Q99466 2003 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 DOCK9Q9BZ29 2069 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.38□□□□□ -0.75
COLCA1-201ENST00000355430 CBY3A6NI87 242 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 REG1BP48304 166 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 CSN3P07498 182 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 FXYD3Q14802 87 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 WDFY1Q8IWB7 410 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 C17orf98A8MV24 154 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 APELAP0DMC3 54 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 PLA2G5P39877 138 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 ID3Q02535 119 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 TMEM30BQ3MIR4 351 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 GFI1BQ5VTD9 330 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 PQLC2Q6ZP29 291 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 PLPPR1Q8TBJ4 325 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 CACNA1BQ00975 2339 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 NCOR1O75376 2440 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 IGHV1-2P23083 117 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 OR2D3Q8NGH3 330 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 C12orf77C9JDV5 145 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 HIST1H1BP16401 226 aaKnown RBP10.37□□□□□ -0.75
COLCA1-201ENST00000355430 ABLIM2Q6H8Q1 611 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 CENPVQ7Z7K6 275 aaPredicted RBP10.37□□□□□ -0.75
COLCA1-201ENST00000355430 WBP1Q96G27 269 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 C7orf69Q9H7B7 122 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 GVINP1Q7Z2Y8 2422 aa10.37□□□□□ -0.75
COLCA1-201ENST00000355430 IGHV2OR16-5A0A0B4J2B6 119 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 RNF224P0DH78 156 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 CA7P43166 264 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 LY6EQ16553 131 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 BMPERQ8N8U9 685 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 TXNDC17Q9BRA2 123 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 RPL23P62829 140 aaKnown RBP10.36□□□□□ -0.75
COLCA1-201ENST00000355430 HIST3H3Q16695 136 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 PIP4P1Q86T03 277 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 NHLRC2Q8NBF2 726 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 SEMA5BQ9P283 1151 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 ZNF106Q9H2Y7 1883 aaKnown RBP10.36□□□□□ -0.75
COLCA1-201ENST00000355430 MED12Q93074 2177 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 SNRNP200O75643 2136 aaKnown RBP10.36□□□□□ -0.75
COLCA1-201ENST00000355430 RNFT1Q5M7Z0 435 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 DEPPQ9NTK1 212 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 MPDZO75970 2070 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 ZNF716A6NP11 495 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 P01737 135 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 ATP5G3P48201 142 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 SPATA45Q537H7 98 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 IBA57Q5T440 356 aaKnown RBP10.36□□□□□ -0.75
COLCA1-201ENST00000355430 FANCMQ8IYD8 2048 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 COL4A4P53420 1690 aaPredicted RBP10.36□□□□□ -0.75
COLCA1-201ENST00000355430 CBLN1P23435 193 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 CLEC7AQ9BXN2 247 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 SPRR3Q9UBC9 169 aa10.36□□□□□ -0.75
COLCA1-201ENST00000355430 IGHV3-21A0A0B4J1V1 117 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 VENTXO95231 258 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 LCN2P80188 198 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 KIAA1644Q3SXP7 199 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 PRSS3P2Q8NHM4 247 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 PAXXQ9BUH6 204 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 S100A4P26447 101 aaKnown RBP10.35□□□□□ -0.75
COLCA1-201ENST00000355430 MFAP2P55001 183 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 IDI2-AS1Q9NZ38 188 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 TRAV24A0A0B4J272 114 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 CD55P08174 381 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 SMIM17P0DL12 118 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 CRYBB3P26998 211 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 LOXL3P58215 753 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 ZNF324BQ6AW86 544 aaPredicted RBP10.35□□□□□ -0.75
COLCA1-201ENST00000355430 SLC35E4Q6ICL7 350 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 OR1L8Q8NGR8 309 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 GATAD1Q8WUU5 269 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 TCF19Q9Y242 345 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 ACACAQ13085 2346 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 RP1P56715 2156 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 TCF21O43680 179 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 ZNF137PP52743 207 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 C21orf62-AS1Q17RA5 79 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 RPL39P5Q59GN2 51 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 SP5Q6BEB4 398 aaPredicted RBP10.35□□□□□ -0.75
COLCA1-201ENST00000355430 COL4A3Q01955 1670 aa10.35□□□□□ -0.75
COLCA1-201ENST00000355430 THBDP07204 575 aa10.34□□□□□ -0.75
COLCA1-201ENST00000355430 ID1P41134 155 aa10.34□□□□□ -0.75
COLCA1-201ENST00000355430 ZNF600Q6ZNG1 722 aa10.34□□□□□ -0.75
COLCA1-201ENST00000355430 CALYQ9NYX4 217 aa10.34□□□□□ -0.75
COLCA1-201ENST00000355430 GCHFRP30047 84 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms