RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 BTF3P20290 206 aaKnown RBP13.79□□□□□ -0.2
SHTN1-202ENST00000355371 GCSHP23434 173 aa13.79□□□□□ -0.2
SHTN1-202ENST00000355371 TSPOP30536 169 aa13.79□□□□□ -0.2
SHTN1-202ENST00000355371 LYZL4Q96KX0 146 aa13.79□□□□□ -0.2
SHTN1-202ENST00000355371 SSBP3Q9BWW4 388 aaPredicted RBP13.79□□□□□ -0.2
SHTN1-202ENST00000355371 PHLDA3Q9Y5J5 127 aa13.79□□□□□ -0.2
SHTN1-202ENST00000355371 PROB1E7EW31 1015 aa13.79□□□□□ -0.2
SHTN1-202ENST00000355371 C17orf82Q86X59 251 aaPredicted RBP13.79□□□□□ -0.2
SHTN1-202ENST00000355371 C17orf100A8MU93 164 aa13.79□□□□□ -0.2
SHTN1-202ENST00000355371 RNF224P0DH78 156 aa13.79□□□□□ -0.2
SHTN1-202ENST00000355371 BTCP35070 178 aa13.79□□□□□ -0.2
SHTN1-202ENST00000355371 M0R3E3 92 aa13.79□□□□□ -0.2
SHTN1-202ENST00000355371 GPX4P36969 197 aaPredicted RBP13.79□□□□□ -0.2
SHTN1-202ENST00000355371 FAM53AQ6NSI3 398 aaPredicted RBP13.79□□□□□ -0.2
SHTN1-202ENST00000355371 DDB2Q92466 427 aa13.79□□□□□ -0.2
SHTN1-202ENST00000355371 CGB1A6NKQ9 187 aa13.78□□□□□ -0.2
SHTN1-202ENST00000355371 NMUP48645 174 aa13.78□□□□□ -0.2
SHTN1-202ENST00000355371 COL5A1-AS1Q5SY13 56 aa13.78□□□□□ -0.2
SHTN1-202ENST00000355371 PEAR1Q5VY43 1037 aaPredicted RBP13.78□□□□□ -0.2
SHTN1-202ENST00000355371 TCF24Q7RTU0 167 aa13.78□□□□□ -0.2
SHTN1-202ENST00000355371 CACNG8Q8WXS5 425 aa13.78□□□□□ -0.2
SHTN1-202ENST00000355371 C18orf12Q96KH6 178 aa13.78□□□□□ -0.2
SHTN1-202ENST00000355371 A0A0B4J293 547 aa13.78□□□□□ -0.2
SHTN1-202ENST00000355371 IGKV1-9A0A0C4DH69 117 aa13.78□□□□□ -0.2
SHTN1-202ENST00000355371 RNF222A6NCQ9 220 aa13.78□□□□□ -0.2
SHTN1-202ENST00000355371 OR4C46A6NHA9 309 aa13.78□□□□□ -0.2
SHTN1-202ENST00000355371 CELA3BP08861 270 aa13.78□□□□□ -0.2
SHTN1-202ENST00000355371 CDX1P47902 265 aaPredicted RBP13.78□□□□□ -0.2
SHTN1-202ENST00000355371 CENPWQ5EE01 88 aa13.78□□□□□ -0.2
SHTN1-202ENST00000355371 DEPPQ9NTK1 212 aa13.78□□□□□ -0.2
SHTN1-202ENST00000355371 RRHO14718 337 aa13.78□□□□□ -0.2
SHTN1-202ENST00000355371 LY6EQ16553 131 aa13.78□□□□□ -0.2
SHTN1-202ENST00000355371 RAX2Q96IS3 184 aa13.78□□□□□ -0.2
SHTN1-202ENST00000355371 CHODLQ9H9P2 273 aa13.78□□□□□ -0.2
SHTN1-202ENST00000355371 MOSP00540 346 aa13.78□□□□□ -0.2
SHTN1-202ENST00000355371 GOLT1AQ6ZVE7 132 aa13.77□□□□□ -0.2
SHTN1-202ENST00000355371 OR1N2Q8NGR9 330 aa13.77□□□□□ -0.2
SHTN1-202ENST00000355371 RNASEH2CQ8TDP1 164 aaKnown RBP13.77□□□□□ -0.2
SHTN1-202ENST00000355371 PRR32B1ATL7 298 aa13.77□□□□□ -0.2
SHTN1-202ENST00000355371 TRGC1P0CF51 173 aa13.77□□□□□ -0.2
SHTN1-202ENST00000355371 SRIP30626 198 aa13.77□□□□□ -0.2
SHTN1-202ENST00000355371 PLPPR1Q8TBJ4 325 aa13.77□□□□□ -0.2
SHTN1-202ENST00000355371 CHD5Q8TDI0 1954 aa13.77□□□□□ -0.2
SHTN1-202ENST00000355371 TRAV14DV4A0A0A6YYC5 116 aa13.77□□□□□ -0.21
SHTN1-202ENST00000355371 SIAH2O43255 324 aa13.77□□□□□ -0.21
SHTN1-202ENST00000355371 YPEL1O60688 119 aa13.77□□□□□ -0.21
SHTN1-202ENST00000355371 EIF3GO75821 320 aaKnown RBP eCLIP13.77□□□□□ -0.21
SHTN1-202ENST00000355371 RPL24P83731 157 aaKnown RBP13.77□□□□□ -0.21
SHTN1-202ENST00000355371 YPEL2Q96QA6 119 aa13.77□□□□□ -0.21
SHTN1-202ENST00000355371 AUP1Q9Y679 476 aa13.77□□□□□ -0.21
SHTN1-202ENST00000355371 SPATA45Q537H7 98 aa13.77□□□□□ -0.21
SHTN1-202ENST00000355371 NAT1P18440 290 aa13.77□□□□□ -0.21
SHTN1-202ENST00000355371 IGKV3D-15A0A087WSY6 115 aa13.76□□□□□ -0.21
SHTN1-202ENST00000355371 GAS1P54826 345 aa13.76□□□□□ -0.21
SHTN1-202ENST00000355371 LCN2P80188 198 aa13.76□□□□□ -0.21
SHTN1-202ENST00000355371 FAM201AQ5SY85 155 aa13.76□□□□□ -0.21
SHTN1-202ENST00000355371 TMEM238LA0A1B0GVL6 79 aa13.76□□□□□ -0.21
SHTN1-202ENST00000355371 A6NJY4 79 aa13.76□□□□□ -0.21
SHTN1-202ENST00000355371 GPX1P07203 203 aa13.76□□□□□ -0.21
SHTN1-202ENST00000355371 FOLR2P14207 255 aa13.76□□□□□ -0.21
SHTN1-202ENST00000355371 RRN3P1Q2M238 152 aa13.76□□□□□ -0.21
SHTN1-202ENST00000355371 C2orf83Q53S99 150 aa13.76□□□□□ -0.21
SHTN1-202ENST00000355371 ZNF497Q6ZNH5 498 aa13.76□□□□□ -0.21
SHTN1-202ENST00000355371 CLDND2Q8NHS1 167 aa13.76□□□□□ -0.21
SHTN1-202ENST00000355371 DLX6P56179 175 aa13.76□□□□□ -0.21
SHTN1-202ENST00000355371 ZNF502Q8TBZ5 544 aa13.76□□□□□ -0.21
SHTN1-202ENST00000355371 A8MXK9 166 aa13.75□□□□□ -0.21
SHTN1-202ENST00000355371 SMUG1Q53HV7 270 aa13.75□□□□□ -0.21
SHTN1-202ENST00000355371 OR10AG1Q8NH19 301 aa13.75□□□□□ -0.21
SHTN1-202ENST00000355371 FBXL15Q9H469 300 aa13.75□□□□□ -0.21
SHTN1-202ENST00000355371 GREB1Q4ZG55 1949 aa13.75□□□□□ -0.21
SHTN1-202ENST00000355371 ZNF25P17030 456 aaPredicted RBP13.75□□□□□ -0.21
SHTN1-202ENST00000355371 TFF3Q07654 80 aa13.75□□□□□ -0.21
SHTN1-202ENST00000355371 ZNF525Q8N782 197 aa13.75□□□□□ -0.21
SHTN1-202ENST00000355371 MRPL20Q9BYC9 149 aaKnown RBP13.75□□□□□ -0.21
SHTN1-202ENST00000355371 NUDT3O95989 172 aa13.75□□□□□ -0.21
SHTN1-202ENST00000355371 NBEAP1P0C6P0 100 aa13.75□□□□□ -0.21
SHTN1-202ENST00000355371 IGFBP2P18065 325 aa13.75□□□□□ -0.21
SHTN1-202ENST00000355371 CRYGSP22914 178 aa13.75□□□□□ -0.21
SHTN1-202ENST00000355371 HBBP68871 147 aa13.75□□□□□ -0.21
SHTN1-202ENST00000355371 H3BTX0 84 aa13.75□□□□□ -0.21
SHTN1-202ENST00000355371 IGHV3-48P01763 117 aa13.75□□□□□ -0.21
SHTN1-202ENST00000355371 SNRPD3P62318 126 aaKnown RBP13.75□□□□□ -0.21
SHTN1-202ENST00000355371 SRP19P09132 144 aaKnown RBP13.74□□□□□ -0.21
SHTN1-202ENST00000355371 MST1P26927 711 aa13.74□□□□□ -0.21
SHTN1-202ENST00000355371 UQCR10Q9UDW1 63 aa13.74□□□□□ -0.21
SHTN1-202ENST00000355371 C12orf54Q6X4T0 127 aa13.74□□□□□ -0.21
SHTN1-202ENST00000355371 OR10S1Q8NGN2 331 aa13.74□□□□□ -0.21
SHTN1-202ENST00000355371 RNASE6Q93091 150 aaKnown RBP13.74□□□□□ -0.21
SHTN1-202ENST00000355371 DCTN5Q9BTE1 182 aa13.74□□□□□ -0.21
SHTN1-202ENST00000355371 TMEM70Q9BUB7 260 aa13.74□□□□□ -0.21
SHTN1-202ENST00000355371 TRPM7Q96QT4 1865 aa13.74□□□□□ -0.21
SHTN1-202ENST00000355371 WDR82Q6UXN9 313 aa13.74□□□□□ -0.21
SHTN1-202ENST00000355371 DOCK4Q8N1I0 1966 aa13.74□□□□□ -0.21
SHTN1-202ENST00000355371 ZNF385CQ66K41 422 aaPredicted RBP13.74□□□□□ -0.21
SHTN1-202ENST00000355371 ZNF207O43670 478 aaKnown RBP13.73□□□□□ -0.21
SHTN1-202ENST00000355371 IGKV1D-33P01593 117 aa13.73□□□□□ -0.21
SHTN1-202ENST00000355371 IGKV1-33P01594 117 aa13.73□□□□□ -0.21
SHTN1-202ENST00000355371 SRSF7Q16629 238 aaKnown RBP eCLIP13.73□□□□□ -0.21
SHTN1-202ENST00000355371 PAQR4Q8N4S7 273 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms