RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 CAMLGP49069 296 aa13.88□□□□□ -0.19
VPS13B-201ENST00000355155 VMA21Q3ZAQ7 101 aa13.88□□□□□ -0.19
VPS13B-201ENST00000355155 ONECUT1Q9UBC0 465 aa13.88□□□□□ -0.19
VPS13B-201ENST00000355155 DOCK11Q5JSL3 2073 aa13.88□□□□□ -0.19
VPS13B-201ENST00000355155 PRB1P04280 392 aa13.88□□□□□ -0.19
VPS13B-201ENST00000355155 RPL8P62917 257 aaKnown RBP13.88□□□□□ -0.19
VPS13B-201ENST00000355155 BPIFCQ8NFQ6 507 aa13.88□□□□□ -0.19
VPS13B-201ENST00000355155 CLDND2Q8NHS1 167 aa13.88□□□□□ -0.19
VPS13B-201ENST00000355155 CFHR4Q92496 578 aa13.88□□□□□ -0.19
VPS13B-201ENST00000355155 A0A1W2PN81 502 aa13.87□□□□□ -0.19
VPS13B-201ENST00000355155 TMEM218A2RU14 115 aa13.87□□□□□ -0.19
VPS13B-201ENST00000355155 CHRNA7P36544 502 aa13.87□□□□□ -0.19
VPS13B-201ENST00000355155 SLC24A4Q8NFF2 622 aa13.87□□□□□ -0.19
VPS13B-201ENST00000355155 DPM3Q9P2X0 92 aa13.87□□□□□ -0.19
VPS13B-201ENST00000355155 CARHSP1Q9Y2V2 147 aaKnown RBP13.87□□□□□ -0.19
VPS13B-201ENST00000355155 PKDREJQ9NTG1 2253 aa13.87□□□□□ -0.19
VPS13B-201ENST00000355155 HOXA1P49639 335 aaPredicted RBP13.87□□□□□ -0.19
VPS13B-201ENST00000355155 DVL1P1P54792 670 aaPredicted RBP13.87□□□□□ -0.19
VPS13B-201ENST00000355155 RUNX1Q01196 453 aa13.87□□□□□ -0.19
VPS13B-201ENST00000355155 PNKDQ8N490 385 aa13.87□□□□□ -0.19
VPS13B-201ENST00000355155 HEYLQ9NQ87 328 aaPredicted RBP13.87□□□□□ -0.19
VPS13B-201ENST00000355155 USP24Q9UPU5 2620 aa13.87□□□□□ -0.19
VPS13B-201ENST00000355155 IGSF10Q6WRI0 2623 aa13.87□□□□□ -0.19
VPS13B-201ENST00000355155 CGB1A6NKQ9 187 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 H7C2Y5 167 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 RRHO14718 337 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 CEACAM3P40198 252 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 TMEM41BQ5BJD5 291 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 AKR1C8PQ5T2L2 129 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 CCDC28AQ8IWP9 274 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 ZNF114Q8NC26 417 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 CCL19Q99731 98 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 SRSF8Q9BRL6 282 aaKnown RBP13.86□□□□□ -0.19
VPS13B-201ENST00000355155 HRH4Q9H3N8 390 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 PLEKHA3Q9HB20 300 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 TBL2Q9Y4P3 447 aaKnown RBP13.86□□□□□ -0.19
VPS13B-201ENST00000355155 LSM4Q9Y4Z0 139 aaKnown RBP13.86□□□□□ -0.19
VPS13B-201ENST00000355155 SMG1Q96Q15 3661 aaKnown RBP13.86□□□□□ -0.19
VPS13B-201ENST00000355155 FOXH1O75593 365 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 HBE1P02100 147 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 MBP02144 154 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 NPY1RP25929 384 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 HTR1DP28221 377 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 REG1BP48304 166 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 EBI3Q14213 229 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 LDLRAD2Q5SZI1 272 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 OR8G2PQ6IF36 304 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 ETV3LQ6ZN32 361 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 C10orf105Q8TEF2 133 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 C1orf159Q96HA4 380 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 INSIG2Q9Y5U4 225 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 HOXB4P17483 251 aaPredicted RBP13.86□□□□□ -0.19
VPS13B-201ENST00000355155 RPS16P62249 146 aaKnown RBP13.86□□□□□ -0.19
VPS13B-201ENST00000355155 TMEM249Q2WGJ8 235 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 ENY2Q9NPA8 101 aa13.86□□□□□ -0.19
VPS13B-201ENST00000355155 NPBQ8NG41 125 aa13.85□□□□□ -0.19
VPS13B-201ENST00000355155 BPESC1Q9GZL8 116 aa13.85□□□□□ -0.19
VPS13B-201ENST00000355155 RFNGQ9Y644 331 aa13.85□□□□□ -0.19
VPS13B-201ENST00000355155 UBE2L5PA0A1B0GUS4 154 aa13.85□□□□□ -0.19
VPS13B-201ENST00000355155 TSPAN15O95858 294 aa13.85□□□□□ -0.19
VPS13B-201ENST00000355155 RNASE2P10153 161 aaKnown RBP13.85□□□□□ -0.19
VPS13B-201ENST00000355155 TUSC1Q2TAM9 212 aa13.85□□□□□ -0.19
VPS13B-201ENST00000355155 SPINK9Q5DT21 86 aa13.85□□□□□ -0.19
VPS13B-201ENST00000355155 RPEQ96AT9 228 aa13.85□□□□□ -0.19
VPS13B-201ENST00000355155 RSG1Q9BU20 258 aa13.85□□□□□ -0.19
VPS13B-201ENST00000355155 NDUFA3O95167 84 aa13.84□□□□□ -0.19
VPS13B-201ENST00000355155 IFNA10P01566 189 aa13.84□□□□□ -0.19
VPS13B-201ENST00000355155 FHITP49789 147 aa13.84□□□□□ -0.19
VPS13B-201ENST00000355155 DSCR9P59020 149 aa13.84□□□□□ -0.19
VPS13B-201ENST00000355155 ARF6P62330 175 aa13.84□□□□□ -0.19
VPS13B-201ENST00000355155 PSG5Q15238 335 aa13.84□□□□□ -0.19
VPS13B-201ENST00000355155 MMD2Q8IY49 270 aa13.84□□□□□ -0.19
VPS13B-201ENST00000355155 RBMXL1Q96E39 390 aaKnown RBP13.84□□□□□ -0.19
VPS13B-201ENST00000355155 NPCDR1Q9BY65 106 aa13.84□□□□□ -0.19
VPS13B-201ENST00000355155 KIAA1456Q9P272 454 aa13.84□□□□□ -0.19
VPS13B-201ENST00000355155 RELNP78509 3460 aa13.84□□□□□ -0.19
VPS13B-201ENST00000355155 VMO1Q7Z5L0 202 aa13.84□□□□□ -0.19
VPS13B-201ENST00000355155 FAM213BQ8TBF2 198 aa13.84□□□□□ -0.19
VPS13B-201ENST00000355155 PIMREGQ9BSJ6 248 aa13.84□□□□□ -0.19
VPS13B-201ENST00000355155 SEC11CQ9BY50 192 aa13.84□□□□□ -0.19
VPS13B-201ENST00000355155 ZNF430Q9H8G1 570 aaPredicted RBP13.84□□□□□ -0.19
VPS13B-201ENST00000355155 C17orf112F2Z3M2 114 aa13.83□□□□□ -0.19
VPS13B-201ENST00000355155 RNASEK-C17orf49H0YIS7 233 aa13.83□□□□□ -0.19
VPS13B-201ENST00000355155 CA2P00918 260 aa13.83□□□□□ -0.19
VPS13B-201ENST00000355155 PRH1P02810 166 aa13.83□□□□□ -0.19
VPS13B-201ENST00000355155 PRSS8Q16651 343 aa13.83□□□□□ -0.19
VPS13B-201ENST00000355155 SLC25A24Q6NUK1 477 aa13.83□□□□□ -0.19
VPS13B-201ENST00000355155 ROS1P08922 2347 aa13.83□□□□□ -0.2
VPS13B-201ENST00000355155 FGF7P21781 194 aa13.83□□□□□ -0.2
VPS13B-201ENST00000355155 GPX4P36969 197 aaPredicted RBP13.83□□□□□ -0.2
VPS13B-201ENST00000355155 OPRK1P41145 380 aa13.83□□□□□ -0.2
VPS13B-201ENST00000355155 SRSF3P84103 164 aaKnown RBP13.83□□□□□ -0.2
VPS13B-201ENST00000355155 RITA1Q96K30 269 aa13.83□□□□□ -0.2
VPS13B-201ENST00000355155 RPRMQ9NS64 109 aa13.83□□□□□ -0.2
VPS13B-201ENST00000355155 SIGLEC9Q9Y336 463 aa13.83□□□□□ -0.2
VPS13B-201ENST00000355155 VENTXO95231 258 aa13.82□□□□□ -0.2
VPS13B-201ENST00000355155 H2AFB1P0C5Y9 115 aa13.82□□□□□ -0.2
VPS13B-201ENST00000355155 COX7A1P24310 79 aa13.82□□□□□ -0.2
VPS13B-201ENST00000355155 UBE2E1P51965 193 aa13.82□□□□□ -0.2
VPS13B-201ENST00000355155 TREML4Q6UXN2 200 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms