RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 ROS1P08922 2347 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 C9orf172C9J069 976 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 SRIP30626 198 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 FABP6P51161 128 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 TMEM56Q96MV1 263 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 SERTAD4Q9NUC0 356 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 TMEM56-RWDD3S4R434 201 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 TRAV24A0A0B4J272 114 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 ZNF207O43670 478 aaKnown RBP7.86□□□□□ -1.15
SMG6-202ENST00000354901 GPX1P07203 203 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 WNT2P09544 360 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 CEBPDP49716 269 aaPredicted RBP7.86□□□□□ -1.15
SMG6-202ENST00000354901 PSG9Q00887 426 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 NMSQ5H8A3 153 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 ACSM6Q6P461 480 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 Q6ZRM9 215 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 CXorf67Q86X51 503 aaPredicted RBP7.86□□□□□ -1.15
SMG6-202ENST00000354901 OR10G8Q8NGN5 311 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 SFRP2Q96HF1 295 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 CHRDL1Q9BU40 450 aa7.86□□□□□ -1.15
SMG6-202ENST00000354901 BDP1A6H8Y1 2624 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 LRP5LA4QPB2 252 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 DEGS1O15121 323 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 TUSC2O75896 110 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 NPPCP23582 126 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 F2RP25116 425 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 UCP1P25874 307 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 PAX9P55771 341 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 LCN2P80188 198 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 FXYD3Q14802 87 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 GCSAMLQ5JQS6 135 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 FAM53AQ6NSI3 398 aaPredicted RBP7.85□□□□□ -1.15
SMG6-202ENST00000354901 PCSK4Q6UW60 755 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 POM121L2Q96KW2 1035 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 DLL3Q9NYJ7 618 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 TAAR3PQ9P1P4 343 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 TRAV38-1A0A0B4J264 116 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 IGHV1-69-2A0A0G2JMI3 117 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 M0R1X1 148 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 CORTO00230 105 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 MMP23AO75900 390 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 MT-CO3P00414 261 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 TFF1P04155 84 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 GRPP07492 148 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 CELA3BP08861 270 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 MC5RP33032 325 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 CA7P43166 264 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 SLC38A11Q08AI6 406 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 SLAQ13239 276 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 GTF2H5Q6ZYL4 71 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 TECRQ9NZ01 308 aaKnown RBP7.85□□□□□ -1.15
SMG6-202ENST00000354901 TRAPPC2LQ9UL33 140 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 BOD1L1Q8NFC6 3051 aa7.85□□□□□ -1.15
SMG6-202ENST00000354901 COL27A1Q8IZC6 1860 aaPredicted RBP7.85□□□□□ -1.15
SMG6-202ENST00000354901 GAGE10A6NGK3 116 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 AHRRA9YTQ3 701 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 TYMSP04818 313 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 HBG1P69891 147 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 HBG2P69892 147 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 ALKBH6Q3KRA9 238 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 RNASEKQ6P5S7 137 aaKnown RBP7.84□□□□□ -1.15
SMG6-202ENST00000354901 ZNF525Q8N782 197 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 FAM216AQ8WUB2 273 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 OR2W1Q9Y3N9 320 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 TRAV1-1A0A0B4J248 108 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 A0A1W2PNU3 283 aaPredicted RBP7.84□□□□□ -1.15
SMG6-202ENST00000354901 CDIPTO14735 213 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 HSBP1O75506 76 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 CTXN2P0C2S0 81 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 GATA2P23769 480 aaPredicted RBP7.84□□□□□ -1.15
SMG6-202ENST00000354901 CTRLP40313 264 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 GNB1P62873 340 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 GNG3P63215 75 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 ID3Q02535 119 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 MDP1Q86V88 176 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 OR5A2Q8NGI9 324 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 MBD3L1Q8WWY6 194 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 TMEM45BQ96B21 275 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 PMCHL2Q9BQD1 86 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 CLEC7AQ9BXN2 247 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 C11orf1Q9H5F2 150 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 TRAV8-6A0A0B4J262 113 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 hDV102S1A0JD36 115 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 PPIAL4DF5H284 164 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 IGLL1P15814 213 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 COL8A2P25067 703 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 MEOX1P50221 254 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 EDDM3BP56851 147 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 PMCHL1Q16048 86 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 ACSF3Q4G176 576 aaPredicted RBP7.84□□□□□ -1.15
SMG6-202ENST00000354901 OR1B1Q8NGR6 318 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 TAF15Q92804 592 aaKnown RBP eCLIP7.84□□□□□ -1.15
SMG6-202ENST00000354901 RAB37Q96AX2 223 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 THYN1Q9P016 225 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 ABI3Q9P2A4 366 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 KMT2EQ8IZD2 1858 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 ZNF318Q5VUA4 2279 aa7.84□□□□□ -1.15
SMG6-202ENST00000354901 IGKV3D-15A0A087WSY6 115 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 IGLC7A0M8Q6 106 aa7.83□□□□□ -1.16
SMG6-202ENST00000354901 TMEM250H0YL14 139 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms