RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 PIGCQ92535 297 aa8.42□□□□□ -1.06
SYNE1-203ENST00000354674 RBMXL1Q96E39 390 aaKnown RBP8.42□□□□□ -1.06
SYNE1-203ENST00000354674 MUC21A0A0G2JKD1 596 aa8.42□□□□□ -1.06
SYNE1-203ENST00000354674 MUC21A0A140T8X8 626 aa8.42□□□□□ -1.06
SYNE1-203ENST00000354674 MPV17P39210 176 aa8.42□□□□□ -1.06
SYNE1-203ENST00000354674 UQCRFS1P47985 274 aa8.42□□□□□ -1.06
SYNE1-203ENST00000354674 MUC21Q5SSG8 566 aa8.42□□□□□ -1.06
SYNE1-203ENST00000354674 ZDHHC23Q8IYP9 409 aa8.42□□□□□ -1.06
SYNE1-203ENST00000354674 NUP37Q8NFH4 326 aa8.42□□□□□ -1.06
SYNE1-203ENST00000354674 OR5A2Q8NGI9 324 aa8.42□□□□□ -1.06
SYNE1-203ENST00000354674 OR5P3Q8WZ94 311 aa8.42□□□□□ -1.06
SYNE1-203ENST00000354674 BBC3Q96PG8 261 aaPredicted RBP8.42□□□□□ -1.06
SYNE1-203ENST00000354674 ZNF286AQ9HBT8 521 aa8.42□□□□□ -1.06
SYNE1-203ENST00000354674 IGSF10Q6WRI0 2623 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 DYSFO75923 2080 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 A0A1B0GW64 132 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 SIRPB1O00241 398 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 SLC17A3O00476 420 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 CHST1O43916 411 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 GNLYP22749 145 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 COL8A2P25067 703 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 DUSP1P28562 367 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 IER3P46695 156 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 GABRA2P47869 451 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 PLCXD3Q63HM9 321 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 OR5D13Q8NGL4 314 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 TMEM242Q9NWH2 141 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 SMG1Q96Q15 3661 aaKnown RBP8.41□□□□□ -1.06
SYNE1-203ENST00000354674 OR5B21A6NL26 309 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 ANKRD30BLA7E2S9 258 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 IAPPP10997 89 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 GLRXP35754 106 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 MTCP1P56278 107 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 SCGB2A2Q13296 93 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 IGFBP7Q16270 282 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 HAPLN4Q86UW8 402 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 BORCS8Q96FH0 119 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 CTDSP1Q9GZU7 261 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 SMDT1Q9H4I9 107 aa8.41□□□□□ -1.06
SYNE1-203ENST00000354674 DPRXA6NFQ7 191 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 SERPINE3A8MV23 424 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 ADAM20O43506 726 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 GATA2P23769 480 aaPredicted RBP8.4□□□□□ -1.06
SYNE1-203ENST00000354674 LGALS7P47929 136 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 RPL24P83731 157 aaKnown RBP8.4□□□□□ -1.06
SYNE1-203ENST00000354674 PSG9Q00887 426 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 MSMPQ1L6U9 139 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 ALKBH6Q3KRA9 238 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 ZNF718Q3SXZ3 478 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 VAX1Q5SQQ9 334 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 OR4B1Q8NGF8 309 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 MRPL30Q8TCC3 161 aaKnown RBP8.4□□□□□ -1.06
SYNE1-203ENST00000354674 RCHY1Q96PM5 261 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 NUDT16L1Q9BRJ7 211 aaKnown RBP8.4□□□□□ -1.06
SYNE1-203ENST00000354674 IL36GQ9NZH8 169 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 RELNP78509 3460 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 TRAV8-6A0A0B4J262 113 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 FAM90A27PA6NNH2 459 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 ZNF728P0DKX0 622 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 LHFPL1Q86WI0 220 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 FAM58AQ8N1B3 248 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 OR8G5Q8NG78 346 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 PRR7Q8TB68 274 aa8.4□□□□□ -1.06
SYNE1-203ENST00000354674 IGLV3-9A0A075B6K5 115 aa8.4□□□□□ -1.07
SYNE1-203ENST00000354674 CRYM-AS1A6NIL9 109 aa8.4□□□□□ -1.07
SYNE1-203ENST00000354674 FCN1O00602 326 aa8.4□□□□□ -1.07
SYNE1-203ENST00000354674 IGHV3-13P01766 116 aa8.4□□□□□ -1.07
SYNE1-203ENST00000354674 HBE1P02100 147 aa8.4□□□□□ -1.07
SYNE1-203ENST00000354674 CRYBA4P53673 196 aa8.4□□□□□ -1.07
SYNE1-203ENST00000354674 KCNIP4Q6PIL6 250 aa8.4□□□□□ -1.07
SYNE1-203ENST00000354674 ZNF808Q8N4W9 903 aaPredicted RBP8.4□□□□□ -1.07
SYNE1-203ENST00000354674 ZNF114Q8NC26 417 aa8.4□□□□□ -1.07
SYNE1-203ENST00000354674 NEUROG1Q92886 237 aa8.4□□□□□ -1.07
SYNE1-203ENST00000354674 CHRDL1Q9BU40 450 aa8.4□□□□□ -1.07
SYNE1-203ENST00000354674 LYRM2Q9NU23 88 aaPredicted RBP8.4□□□□□ -1.07
SYNE1-203ENST00000354674 SLC39A9Q9NUM3 307 aa8.4□□□□□ -1.07
SYNE1-203ENST00000354674 PLEKHJ1Q9NW61 149 aa8.4□□□□□ -1.07
SYNE1-203ENST00000354674 RNF212BA8MTL3 300 aa8.39□□□□□ -1.07
SYNE1-203ENST00000354674 AZU1P20160 251 aa8.39□□□□□ -1.07
SYNE1-203ENST00000354674 GNRHRP30968 328 aa8.39□□□□□ -1.07
SYNE1-203ENST00000354674 RAB9AP51151 201 aa8.39□□□□□ -1.07
SYNE1-203ENST00000354674 BAXQ07812 192 aa8.39□□□□□ -1.07
SYNE1-203ENST00000354674 FAM89BQ8N5H3 189 aa8.39□□□□□ -1.07
SYNE1-203ENST00000354674 OR1B1Q8NGR6 318 aa8.39□□□□□ -1.07
SYNE1-203ENST00000354674 UHRF2Q96PU4 802 aa8.39□□□□□ -1.07
SYNE1-203ENST00000354674 ANGPTL7O43827 346 aa8.39□□□□□ -1.07
SYNE1-203ENST00000354674 PAGE4O60829 102 aa8.39□□□□□ -1.07
SYNE1-203ENST00000354674 C3orf79P0CE67 100 aa8.39□□□□□ -1.07
SYNE1-203ENST00000354674 CA6P23280 308 aa8.39□□□□□ -1.07
SYNE1-203ENST00000354674 GRNP28799 593 aaKnown RBP8.39□□□□□ -1.07
SYNE1-203ENST00000354674 TMEM187Q14656 261 aa8.39□□□□□ -1.07
SYNE1-203ENST00000354674 SCGB1C1Q8TD33 95 aa8.39□□□□□ -1.07
SYNE1-203ENST00000354674 ITLN2Q8WWU7 325 aaPredicted RBP8.39□□□□□ -1.07
SYNE1-203ENST00000354674 SFRP2Q96HF1 295 aa8.39□□□□□ -1.07
SYNE1-203ENST00000354674 PYGO2Q9BRQ0 406 aa8.39□□□□□ -1.07
SYNE1-203ENST00000354674 TM2D1Q9BX74 207 aa8.39□□□□□ -1.07
SYNE1-203ENST00000354674 MRPL18Q9H0U6 180 aaKnown RBP8.39□□□□□ -1.07
SYNE1-203ENST00000354674 NGBQ9NPG2 151 aa8.39□□□□□ -1.07
SYNE1-203ENST00000354674 CISD1Q9NZ45 108 aaKnown RBP8.39□□□□□ -1.07
SYNE1-203ENST00000354674 UBE2J1Q9Y385 318 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms