RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 FOXA3P55318 350 aaPredicted RBP8.51□□□□□ -1.05
COL11A1-201ENST00000353414 RPS11P62280 158 aaKnown RBP eCLIP8.51□□□□□ -1.05
COL11A1-201ENST00000353414 GCSAMQ8N6F7 178 aa8.51□□□□□ -1.05
COL11A1-201ENST00000353414 SEMA5BQ9P283 1151 aa8.51□□□□□ -1.05
COL11A1-201ENST00000353414 SAP25Q8TEE9 199 aa8.51□□□□□ -1.05
COL11A1-201ENST00000353414 DDA1Q9BW61 102 aa8.51□□□□□ -1.05
COL11A1-201ENST00000353414 KIAA1551Q9HCM1 1747 aa8.51□□□□□ -1.05
COL11A1-201ENST00000353414 GATA2P23769 480 aaPredicted RBP8.51□□□□□ -1.05
COL11A1-201ENST00000353414 NXT2Q9NPJ8 142 aaKnown RBP8.51□□□□□ -1.05
COL11A1-201ENST00000353414 HS3ST3B1Q9Y662 390 aa8.51□□□□□ -1.05
COL11A1-201ENST00000353414 MPDZO75970 2070 aa8.51□□□□□ -1.05
COL11A1-201ENST00000353414 TRGV4A0A0C4DH28 118 aa8.5□□□□□ -1.05
COL11A1-201ENST00000353414 LEPROTL1O95214 131 aa8.5□□□□□ -1.05
COL11A1-201ENST00000353414 SMIM13P0DJ93 91 aa8.5□□□□□ -1.05
COL11A1-201ENST00000353414 ALKBH7Q9BT30 221 aaPredicted RBP8.5□□□□□ -1.05
COL11A1-201ENST00000353414 CD160O95971 181 aa8.5□□□□□ -1.05
COL11A1-201ENST00000353414 P2RY6Q15077 328 aa8.5□□□□□ -1.05
COL11A1-201ENST00000353414 SAP30O75446 220 aa8.5□□□□□ -1.05
COL11A1-201ENST00000353414 TMEM42Q69YG0 159 aa8.5□□□□□ -1.05
COL11A1-201ENST00000353414 SELENOHQ8IZQ5 122 aaKnown RBP8.5□□□□□ -1.05
COL11A1-201ENST00000353414 DOCK9Q9BZ29 2069 aa8.5□□□□□ -1.05
COL11A1-201ENST00000353414 LOC390937A0A1W2PQ73 354 aa8.5□□□□□ -1.05
COL11A1-201ENST00000353414 PNRC1Q12796 327 aaPredicted RBP8.5□□□□□ -1.05
COL11A1-201ENST00000353414 ZNF585BQ52M93 769 aa8.5□□□□□ -1.05
COL11A1-201ENST00000353414 CHRNA10Q9GZZ6 450 aa8.5□□□□□ -1.05
COL11A1-201ENST00000353414 SIRT4Q9Y6E7 314 aaPredicted RBP8.5□□□□□ -1.05
COL11A1-201ENST00000353414 DOCK6Q96HP0 2047 aa8.5□□□□□ -1.05
COL11A1-201ENST00000353414 MARCH11A6NNE9 402 aa8.5□□□□□ -1.05
COL11A1-201ENST00000353414 GDF15Q99988 308 aa8.5□□□□□ -1.05
COL11A1-201ENST00000353414 AKAP6Q13023 2319 aa8.5□□□□□ -1.05
COL11A1-201ENST00000353414 IGKV1-8A0A0C4DH67 115 aa8.5□□□□□ -1.05
COL11A1-201ENST00000353414 SMIM6P0DI80 62 aa8.5□□□□□ -1.05
COL11A1-201ENST00000353414 FAM216BQ8N7L0 139 aa8.5□□□□□ -1.05
COL11A1-201ENST00000353414 MOSPD3O75425 235 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 HOXA6P31267 233 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 TDGF1P3P51864 188 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 CKS1BP61024 79 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 OR10S1Q8NGN2 331 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 C10orf35Q96D05 121 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 TXNDC17Q9BRA2 123 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 TMEM106BQ9NUM4 274 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 C1QTNF9BB2RNN3 333 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 CFDP00746 253 aaPredicted RBP8.49□□□□□ -1.05
COL11A1-201ENST00000353414 FBLN7Q53RD9 439 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 DOCK10Q96BY6 2186 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 RREB1Q92766 1687 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 MIXL1Q9H2W2 232 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 METRNQ9UJH8 293 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 TNS1Q9HBL0 1735 aaKnown RBP8.49□□□□□ -1.05
COL11A1-201ENST00000353414 A0A1W2PQM1 296 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 KLF4O43474 513 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 CNTFRP26992 372 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 ZNF818PQ6ZRF7 136 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 DRAM1Q8N682 238 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 C14orf144Q96I85 54 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 TRAV40A0A0B4J280 105 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 ERVK11-1P61568 191 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 C8orf46Q8TAG6 207 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 MUC1P15941 1255 aaPredicted RBP8.49□□□□□ -1.05
COL11A1-201ENST00000353414 FGF9P31371 208 aaPredicted RBP8.49□□□□□ -1.05
COL11A1-201ENST00000353414 CTAG1AP78358 180 aa8.49□□□□□ -1.05
COL11A1-201ENST00000353414 WDR90Q96KV7 1748 aa8.48□□□□□ -1.05
COL11A1-201ENST00000353414 B9A039 149 aa8.48□□□□□ -1.05
COL11A1-201ENST00000353414 HOGA1Q86XE5 327 aa8.48□□□□□ -1.05
COL11A1-201ENST00000353414 ARPC1AQ92747 370 aa8.48□□□□□ -1.05
COL11A1-201ENST00000353414 CDK2AP2O75956 126 aa8.48□□□□□ -1.05
COL11A1-201ENST00000353414 ZBTB34Q8NCN2 500 aa8.48□□□□□ -1.05
COL11A1-201ENST00000353414 MARS2Q96GW9 593 aaKnown RBP8.48□□□□□ -1.05
COL11A1-201ENST00000353414 COL25A1Q9BXS0 654 aaPredicted RBP8.48□□□□□ -1.05
COL11A1-201ENST00000353414 PEX7O00628 323 aa8.48□□□□□ -1.05
COL11A1-201ENST00000353414 NGFRP08138 427 aa8.48□□□□□ -1.05
COL11A1-201ENST00000353414 FAM27BQ5VT28 67 aa8.48□□□□□ -1.05
COL11A1-201ENST00000353414 TMEM183AQ8IXX5 376 aa8.48□□□□□ -1.05
COL11A1-201ENST00000353414 WFDC6Q9BQY6 131 aa8.48□□□□□ -1.05
COL11A1-201ENST00000353414 SFXN3Q9BWM7 321 aa8.48□□□□□ -1.05
COL11A1-201ENST00000353414 MRPS16Q9Y3D3 137 aaKnown RBP8.48□□□□□ -1.05
COL11A1-201ENST00000353414 ASIPP42127 132 aa8.48□□□□□ -1.05
COL11A1-201ENST00000353414 LINC00299Q6ZSB3 139 aa8.48□□□□□ -1.05
COL11A1-201ENST00000353414 OR9G1Q8NH87 305 aa8.48□□□□□ -1.05
COL11A1-201ENST00000353414 KCNS1Q96KK3 526 aa8.48□□□□□ -1.05
COL11A1-201ENST00000353414 SCGB3A1Q96QR1 104 aa8.48□□□□□ -1.05
COL11A1-201ENST00000353414 SRSF4Q08170 494 aaKnown RBP8.48□□□□□ -1.05
COL11A1-201ENST00000353414 FAM74A3Q4VXF1 159 aa8.48□□□□□ -1.05
COL11A1-201ENST00000353414 A0A1B0GWB2 263 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 MSGN1A6NI15 193 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 H0Y980 276 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 ZNF688P0C7X2 276 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 WDR34Q96EX3 536 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 V9GYH0 126 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 CACNA1DQ01668 2161 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 SLC17A3O00476 420 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 CCL3L1P16619 93 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 RAB9AP51151 201 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 HBBP68871 147 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 TEX45Q8NA69 505 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 ZNF236Q9UL36 1845 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 TGFBR3LH3BV60 316 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 TRGC1P0CF51 173 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 FHITP49789 147 aa8.47□□□□□ -1.05
COL11A1-201ENST00000353414 GNG5P63218 68 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms