RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 TRAV3A0A0B4J244 114 aa14.82□□□□□ -0.04
APP-202ENST00000348990 OR10J4P0C629 311 aa14.82□□□□□ -0.04
APP-202ENST00000348990 CLDN18P56856 261 aa14.82□□□□□ -0.04
APP-202ENST00000348990 ARG2P78540 354 aa14.82□□□□□ -0.04
APP-202ENST00000348990 PRR31Q5SQ13 230 aa14.82□□□□□ -0.04
APP-202ENST00000348990 FAM216AQ8WUB2 273 aa14.82□□□□□ -0.04
APP-202ENST00000348990 RCHY1Q96PM5 261 aa14.82□□□□□ -0.04
APP-202ENST00000348990 FAM173AQ9BQD7 235 aa14.82□□□□□ -0.04
APP-202ENST00000348990 IGKV3D-15A0A087WSY6 115 aa14.82□□□□□ -0.04
APP-202ENST00000348990 YPEL1O60688 119 aa14.82□□□□□ -0.04
APP-202ENST00000348990 FABP6P51161 128 aa14.82□□□□□ -0.04
APP-202ENST00000348990 LGALS4P56470 323 aa14.82□□□□□ -0.04
APP-202ENST00000348990 LCN12Q6JVE5 192 aa14.82□□□□□ -0.04
APP-202ENST00000348990 STPG3Q8N7X2 389 aa14.82□□□□□ -0.04
APP-202ENST00000348990 YPEL2Q96QA6 119 aa14.82□□□□□ -0.04
APP-202ENST00000348990 SLC35D1Q9NTN3 355 aa14.82□□□□□ -0.04
APP-202ENST00000348990 LAMTOR2Q9Y2Q5 125 aa14.82□□□□□ -0.04
APP-202ENST00000348990 CADP27708 2225 aa14.82□□□□□ -0.04
APP-202ENST00000348990 NCOR1O75376 2440 aa14.82□□□□□ -0.04
APP-202ENST00000348990 FOXF2Q12947 444 aa14.81□□□□□ -0.04
APP-202ENST00000348990 ERASQ7Z444 233 aa14.81□□□□□ -0.04
APP-202ENST00000348990 METRNQ9UJH8 293 aa14.81□□□□□ -0.04
APP-202ENST00000348990 DPRXA6NFQ7 191 aa14.81□□□□□ -0.04
APP-202ENST00000348990 LYZL6O75951 148 aa14.81□□□□□ -0.04
APP-202ENST00000348990 CA1P00915 261 aaPredicted RBP14.81□□□□□ -0.04
APP-202ENST00000348990 EFNB3Q15768 340 aa14.81□□□□□ -0.04
APP-202ENST00000348990 RPL39P5Q59GN2 51 aa14.81□□□□□ -0.04
APP-202ENST00000348990 C1orf174Q8IYL3 243 aa14.81□□□□□ -0.04
APP-202ENST00000348990 TNCP24821 2201 aa14.81□□□□□ -0.04
APP-202ENST00000348990 MPDU1O75352 247 aa14.81□□□□□ -0.04
APP-202ENST00000348990 ZNF146Q15072 292 aa14.81□□□□□ -0.04
APP-202ENST00000348990 RAB1CQ92928 201 aa14.81□□□□□ -0.04
APP-202ENST00000348990 FAM122AQ96E09 287 aa14.81□□□□□ -0.04
APP-202ENST00000348990 NPVFQ9HCQ7 196 aa14.81□□□□□ -0.04
APP-202ENST00000348990 TEPPQ6URK8 271 aa14.8□□□□□ -0.04
APP-202ENST00000348990 GMPPAQ96IJ6 420 aaPredicted RBP14.8□□□□□ -0.04
APP-202ENST00000348990 TXNDC17Q9BRA2 123 aa14.8□□□□□ -0.04
APP-202ENST00000348990 SSBP3Q9BWW4 388 aaPredicted RBP14.8□□□□□ -0.04
APP-202ENST00000348990 VWC2Q2TAL6 325 aa14.8□□□□□ -0.04
APP-202ENST00000348990 Q56UQ5 140 aa14.8□□□□□ -0.04
APP-202ENST00000348990 DCAF12Q5T6F0 453 aa14.8□□□□□ -0.04
APP-202ENST00000348990 UNQ5815/PRO19632Q6UWF5 114 aa14.8□□□□□ -0.04
APP-202ENST00000348990 MIR17HGQ75NE6 70 aa14.8□□□□□ -0.04
APP-202ENST00000348990 S1PR3Q99500 378 aa14.8□□□□□ -0.04
APP-202ENST00000348990 ZNF331Q9NQX6 463 aaPredicted RBP14.8□□□□□ -0.04
APP-202ENST00000348990 CLCF1Q9UBD9 225 aa14.8□□□□□ -0.04
APP-202ENST00000348990 P0C879 139 aa14.79□□□□□ -0.04
APP-202ENST00000348990 GATA2P23769 480 aaPredicted RBP14.79□□□□□ -0.04
APP-202ENST00000348990 MAJINQ3KP22 176 aa14.79□□□□□ -0.04
APP-202ENST00000348990 TIPARPQ7Z3E1 657 aaKnown RBP14.79□□□□□ -0.04
APP-202ENST00000348990 LEAP2Q969E1 77 aa14.79□□□□□ -0.04
APP-202ENST00000348990 COQ2Q96H96 371 aa14.79□□□□□ -0.04
APP-202ENST00000348990 ZNF703Q9H7S9 590 aaPredicted RBP14.79□□□□□ -0.04
APP-202ENST00000348990 GPR179Q6PRD1 2367 aa14.79□□□□□ -0.04
APP-202ENST00000348990 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.79□□□□□ -0.04
APP-202ENST00000348990 Q8N7P7 452 aa14.79□□□□□ -0.04
APP-202ENST00000348990 CT55Q8WUE5 264 aa14.79□□□□□ -0.04
APP-202ENST00000348990 TTTY12Q9BZ98 90 aa14.79□□□□□ -0.04
APP-202ENST00000348990 TIMM8BQ9Y5J9 83 aaPredicted RBP14.79□□□□□ -0.04
APP-202ENST00000348990 TIMM8AO60220 97 aaPredicted RBP14.79□□□□□ -0.04
APP-202ENST00000348990 HSBP1O75506 76 aa14.79□□□□□ -0.04
APP-202ENST00000348990 C3orf79P0CE67 100 aa14.79□□□□□ -0.04
APP-202ENST00000348990 ERVK11-1P61568 191 aa14.79□□□□□ -0.04
APP-202ENST00000348990 TMEM251Q8N6I4 163 aa14.79□□□□□ -0.04
APP-202ENST00000348990 KLHDC1Q8N7A1 406 aa14.79□□□□□ -0.04
APP-202ENST00000348990 TCTEX1D1Q8N7M0 179 aa14.79□□□□□ -0.04
APP-202ENST00000348990 HYPMO75409 117 aa14.78□□□□□ -0.04
APP-202ENST00000348990 IGFBP2P18065 325 aa14.78□□□□□ -0.04
APP-202ENST00000348990 ABCA1O95477 2261 aa14.78□□□□□ -0.04
APP-202ENST00000348990 A0A1W2PS18 150 aa14.78□□□□□ -0.04
APP-202ENST00000348990 CER1O95813 267 aa14.78□□□□□ -0.04
APP-202ENST00000348990 PRR27Q6MZM9 219 aa14.78□□□□□ -0.04
APP-202ENST00000348990 WDR73Q6P4I2 378 aa14.78□□□□□ -0.04
APP-202ENST00000348990 Q6ZR03 302 aa14.78□□□□□ -0.04
APP-202ENST00000348990 TCF19Q9Y242 345 aa14.78□□□□□ -0.04
APP-202ENST00000348990 CEP192Q8TEP8 1941 aa14.78□□□□□ -0.04
APP-202ENST00000348990 ZNF83P51522 516 aa14.77□□□□□ -0.04
APP-202ENST00000348990 ETFRF1Q6IPR1 90 aa14.77□□□□□ -0.04
APP-202ENST00000348990 ABI3Q9P2A4 366 aa14.77□□□□□ -0.04
APP-202ENST00000348990 TRIOBPQ9H2D6 2365 aa14.77□□□□□ -0.04
APP-202ENST00000348990 ROS1P08922 2347 aa14.77□□□□□ -0.04
APP-202ENST00000348990 USF1P22415 310 aaPredicted RBP14.77□□□□□ -0.04
APP-202ENST00000348990 MPV17P39210 176 aa14.77□□□□□ -0.04
APP-202ENST00000348990 Q0VG73 95 aa14.77□□□□□ -0.04
APP-202ENST00000348990 STUMQ69YW2 141 aa14.77□□□□□ -0.04
APP-202ENST00000348990 SLC35E4Q6ICL7 350 aa14.77□□□□□ -0.04
APP-202ENST00000348990 KCNS1Q96KK3 526 aa14.77□□□□□ -0.04
APP-202ENST00000348990 ASCL3Q9NQ33 180 aa14.77□□□□□ -0.04
APP-202ENST00000348990 TMEM140Q9NV12 185 aa14.77□□□□□ -0.04
APP-202ENST00000348990 SMPD2O60906 423 aa14.77□□□□□ -0.05
APP-202ENST00000348990 SS18L1O75177 396 aaPredicted RBP14.77□□□□□ -0.05
APP-202ENST00000348990 ZNF324O75467 553 aaPredicted RBP14.77□□□□□ -0.05
APP-202ENST00000348990 CRYABP02511 175 aaKnown RBP14.77□□□□□ -0.05
APP-202ENST00000348990 NPY1RP25929 384 aa14.77□□□□□ -0.05
APP-202ENST00000348990 LPAL2Q16609 132 aa14.77□□□□□ -0.05
APP-202ENST00000348990 FBXW9Q5XUX1 488 aa14.77□□□□□ -0.05
APP-202ENST00000348990 HCFC1P51610 2035 aa14.77□□□□□ -0.05
APP-202ENST00000348990 HEATR1Q9H583 2144 aaKnown RBP14.77□□□□□ -0.05
APP-202ENST00000348990 TPRP12270 2363 aaKnown RBP14.76□□□□□ -0.05
APP-202ENST00000348990 LNP1A1A4G5 178 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms