RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 ITLN2Q8WWU7 325 aaPredicted RBP10.6□□□□□ -0.71
CLK3-201ENST00000345005 CCL17Q92583 94 aa10.6□□□□□ -0.71
CLK3-201ENST00000345005 GPR146Q96CH1 333 aa10.6□□□□□ -0.71
CLK3-201ENST00000345005 RHOVQ96L33 236 aa10.6□□□□□ -0.71
CLK3-201ENST00000345005 PSENENQ9NZ42 101 aa10.6□□□□□ -0.71
CLK3-201ENST00000345005 IGHV1-69-2A0A0G2JMI3 117 aa10.59□□□□□ -0.71
CLK3-201ENST00000345005 ZFP92A6NM28 416 aa10.59□□□□□ -0.71
CLK3-201ENST00000345005 F2RL2O00254 374 aa10.59□□□□□ -0.71
CLK3-201ENST00000345005 PHOX2AO14813 284 aa10.59□□□□□ -0.71
CLK3-201ENST00000345005 ZG16O60844 167 aa10.59□□□□□ -0.71
CLK3-201ENST00000345005 EPHA1P21709 976 aa10.59□□□□□ -0.71
CLK3-201ENST00000345005 UQCRFS1P47985 274 aa10.59□□□□□ -0.71
CLK3-201ENST00000345005 PSMB3P49720 205 aa10.59□□□□□ -0.71
CLK3-201ENST00000345005 ACOT6Q3I5F7 207 aaPredicted RBP10.59□□□□□ -0.71
CLK3-201ENST00000345005 DRAM1Q8N682 238 aa10.59□□□□□ -0.71
CLK3-201ENST00000345005 ZNF525Q8N782 197 aa10.59□□□□□ -0.71
CLK3-201ENST00000345005 GPHA2Q96T91 129 aa10.59□□□□□ -0.71
CLK3-201ENST00000345005 HIST1H2BLQ99880 126 aa10.59□□□□□ -0.71
CLK3-201ENST00000345005 MANBALQ9NQG1 85 aa10.59□□□□□ -0.71
CLK3-201ENST00000345005 SLC39A9Q9NUM3 307 aa10.59□□□□□ -0.71
CLK3-201ENST00000345005 LIN7CQ9NUP9 197 aaKnown RBP10.59□□□□□ -0.71
CLK3-201ENST00000345005 JPT1Q9UK76 154 aa10.59□□□□□ -0.71
CLK3-201ENST00000345005 USF3Q68DE3 2245 aa10.59□□□□□ -0.71
CLK3-201ENST00000345005 FASNP49327 2511 aaKnown RBP10.59□□□□□ -0.71
CLK3-201ENST00000345005 DOCK11Q5JSL3 2073 aa10.59□□□□□ -0.71
CLK3-201ENST00000345005 TRGV10A0A0A0MS01 117 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 KIAA1324LA8MWY0 1029 aaPredicted RBP10.58□□□□□ -0.72
CLK3-201ENST00000345005 PPP5D1E7EU14 171 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 CGB3P0DN86 165 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 CGB7P0DN87 165 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 NCR3LG1Q68D85 454 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 OR51H1Q8NH63 302 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 GCN1Q92616 2671 aaKnown RBP10.58□□□□□ -0.72
CLK3-201ENST00000345005 CEBPZOSA8MTT3 80 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 TMPRSS2O15393 492 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 YPEL1O60688 119 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 KBTBD11O94819 623 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 VENTXO95231 258 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 SRP14P37108 136 aaKnown RBP10.58□□□□□ -0.72
CLK3-201ENST00000345005 PPOXP50336 477 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 WDR25Q64LD2 544 aaPredicted RBP10.58□□□□□ -0.72
CLK3-201ENST00000345005 FAM216BQ8N7L0 139 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 OR1P1Q8NH06 330 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 CORO2AQ92828 525 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 YPEL2Q96QA6 119 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 SMIM7Q9BQ49 75 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 WDR61Q9GZS3 305 aaKnown RBP10.58□□□□□ -0.72
CLK3-201ENST00000345005 OR2D2Q9H210 308 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 CALYQ9NYX4 217 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 GNG12Q9UBI6 72 aa10.58□□□□□ -0.72
CLK3-201ENST00000345005 IGHV3-43A0A0B4J1X8 118 aa10.57□□□□□ -0.72
CLK3-201ENST00000345005 KBTBD11-OT1A0A1B0GTJ5 212 aa10.57□□□□□ -0.72
CLK3-201ENST00000345005 MAP1LC3B2A6NCE7 125 aa10.57□□□□□ -0.72
CLK3-201ENST00000345005 PFN1P07737 140 aaKnown RBP10.57□□□□□ -0.72
CLK3-201ENST00000345005 RD3LP0DJH9 198 aa10.57□□□□□ -0.72
CLK3-201ENST00000345005 IGHV3-43DP0DP04 118 aa10.57□□□□□ -0.72
CLK3-201ENST00000345005 PDLIM4P50479 330 aa10.57□□□□□ -0.72
CLK3-201ENST00000345005 MEF2BQ02080 365 aaPredicted RBP10.57□□□□□ -0.72
CLK3-201ENST00000345005 USF2Q15853 346 aaPredicted RBP10.57□□□□□ -0.72
CLK3-201ENST00000345005 BSXQ3C1V8 233 aa10.57□□□□□ -0.72
CLK3-201ENST00000345005 TMEM30BQ3MIR4 351 aa10.57□□□□□ -0.72
CLK3-201ENST00000345005 MORN2Q502X0 79 aa10.57□□□□□ -0.72
CLK3-201ENST00000345005 DUX4L9Q6RFH8 374 aaPredicted RBP10.57□□□□□ -0.72
CLK3-201ENST00000345005 MAP1LC3BQ9GZQ8 125 aa10.57□□□□□ -0.72
CLK3-201ENST00000345005 SLC25A10Q9UBX3 287 aaPredicted RBP10.57□□□□□ -0.72
CLK3-201ENST00000345005 CLN8Q9UBY8 286 aa10.57□□□□□ -0.72
CLK3-201ENST00000345005 RFNGQ9Y644 331 aa10.57□□□□□ -0.72
CLK3-201ENST00000345005 hADV38S2A0JD32 116 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 H7BYZ3 331 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 TNFRSF13BO14836 293 aaPredicted RBP10.56□□□□□ -0.72
CLK3-201ENST00000345005 LOXL3P58215 753 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 MEF2CQ06413 473 aaPredicted RBP10.56□□□□□ -0.72
CLK3-201ENST00000345005 LTC4SQ16873 150 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 C17orf58Q2M2W7 97 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 KCNIP4Q6PIL6 250 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 LCN15Q6UWW0 184 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 OR4X1Q8NH49 305 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 LHX4Q969G2 390 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 TMEM18Q96B42 140 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 LINC00574Q9H8X3 128 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 CBLN4Q9NTU7 201 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 CTXND1A0A1B0GTU2 59 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 M0R143 59 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 ITGB1BP1O14713 200 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 NDUFB3O43676 98 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 ZNF16P17020 682 aaPredicted RBP10.56□□□□□ -0.72
CLK3-201ENST00000345005 LCN2P80188 198 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 CATR1Q13166 79 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 LRRC10Q5BKY1 277 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 GFI1BQ5VTD9 330 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 FAM53AQ6NSI3 398 aaPredicted RBP10.56□□□□□ -0.72
CLK3-201ENST00000345005 ZNF843Q8N446 348 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 TCTEX1D1Q8N7M0 179 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 TAF15Q92804 592 aaKnown RBP eCLIP10.56□□□□□ -0.72
CLK3-201ENST00000345005 IMMP2LQ96T52 175 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 RAB1BQ9H0U4 201 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 KAAG1Q9UBP8 84 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 CACNG5Q9UF02 275 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 PSG11Q9UQ72 335 aa10.56□□□□□ -0.72
CLK3-201ENST00000345005 ZNF462Q96JM2 2506 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms