RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 TMEM68Q96MH6 324 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 FYTTD1Q96QD9 318 aaKnown RBP16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 C7orf50Q9BRJ6 194 aaKnown RBP16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 COMMD5Q9GZQ3 224 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 ZFP57Q9NU63 452 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 hCG_2014768A0A024R1R8 64 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 NUDT19A8MXV4 375 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 SNAPC5O75971 98 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 IGKV1-39P01597 117 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 IGLV1-40P01703 118 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 IGKV1D-39P04432 117 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 RBMS2Q15434 407 aaKnown RBP16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 C19orf54Q5BKX5 351 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 SOX15O60248 233 aa16.27■□□□□ 0.19
SMARCB1-202ENST00000344921 ATG12O94817 140 aa16.27■□□□□ 0.19
SMARCB1-202ENST00000344921 AKR1C2P52895 323 aa16.27■□□□□ 0.19
SMARCB1-202ENST00000344921 RPL23AP62750 156 aaKnown RBP16.27■□□□□ 0.19
SMARCB1-202ENST00000344921 SEC22AQ96IW7 307 aa16.27■□□□□ 0.19
SMARCB1-202ENST00000344921 KLK15Q9H2R5 256 aa16.27■□□□□ 0.19
SMARCB1-202ENST00000344921 NSG2Q9Y328 171 aa16.27■□□□□ 0.19
SMARCB1-202ENST00000344921 ADARB2-AS1A8MUL3 147 aa16.26■□□□□ 0.19
SMARCB1-202ENST00000344921 TSPAN15O95858 294 aa16.26■□□□□ 0.19
SMARCB1-202ENST00000344921 IL6RP08887 468 aaPredicted RBP16.26■□□□□ 0.19
SMARCB1-202ENST00000344921 MYOD1P15172 320 aa16.26■□□□□ 0.19
SMARCB1-202ENST00000344921 UCP1P25874 307 aa16.26■□□□□ 0.19
SMARCB1-202ENST00000344921 RAB9AP51151 201 aa16.26■□□□□ 0.19
SMARCB1-202ENST00000344921 OR4F17Q8NGA8 305 aa16.26■□□□□ 0.19
SMARCB1-202ENST00000344921 RNASE11Q8TAA1 199 aaKnown RBP16.26■□□□□ 0.19
SMARCB1-202ENST00000344921 FAM110DQ8TAY7 271 aaPredicted RBP16.26■□□□□ 0.19
SMARCB1-202ENST00000344921 MS4A10Q96PG2 267 aa16.26■□□□□ 0.19
SMARCB1-202ENST00000344921 OR4F4Q96R69 305 aa16.26■□□□□ 0.19
SMARCB1-202ENST00000344921 TMEM222Q9H0R3 208 aa16.26■□□□□ 0.19
SMARCB1-202ENST00000344921 RBMXL2O75526 392 aaKnown RBP16.25■□□□□ 0.19
SMARCB1-202ENST00000344921 DHODHQ02127 395 aa16.25■□□□□ 0.19
SMARCB1-202ENST00000344921 ASPHD1Q5U4P2 390 aa16.25■□□□□ 0.19
SMARCB1-202ENST00000344921 RNF152Q8N8N0 203 aa16.25■□□□□ 0.19
SMARCB1-202ENST00000344921 KLHL30-AS1Q8NEE0 82 aa16.25■□□□□ 0.19
SMARCB1-202ENST00000344921 GLYATL2Q8WU03 294 aa16.25■□□□□ 0.19
SMARCB1-202ENST00000344921 TMEM230Q96A57 120 aa16.25■□□□□ 0.19
SMARCB1-202ENST00000344921 COA4Q9NYJ1 87 aa16.25■□□□□ 0.19
SMARCB1-202ENST00000344921 HMX3A6NHT5 357 aa16.25■□□□□ 0.19
SMARCB1-202ENST00000344921 E7EUB6 86 aa16.25■□□□□ 0.19
SMARCB1-202ENST00000344921 LYRM1O43325 122 aa16.25■□□□□ 0.19
SMARCB1-202ENST00000344921 OR9G9P0C7N8 305 aa16.25■□□□□ 0.19
SMARCB1-202ENST00000344921 ZNF695Q8IW36 515 aa16.25■□□□□ 0.19
SMARCB1-202ENST00000344921 ZBTB8BQ8NAP8 495 aaPredicted RBP16.25■□□□□ 0.19
SMARCB1-202ENST00000344921 OR4A16Q8NH70 328 aa16.25■□□□□ 0.19
SMARCB1-202ENST00000344921 RRNAD1Q96FB5 475 aaKnown RBP16.25■□□□□ 0.19
SMARCB1-202ENST00000344921 ANXA3P12429 323 aa16.24■□□□□ 0.19
SMARCB1-202ENST00000344921 OR2B8PP59922 312 aa16.24■□□□□ 0.19
SMARCB1-202ENST00000344921 TMEM128Q5BJH2 165 aa16.24■□□□□ 0.19
SMARCB1-202ENST00000344921 PRR31Q5SQ13 230 aa16.24■□□□□ 0.19
SMARCB1-202ENST00000344921 C18orf65Q6ZTR6 163 aa16.24■□□□□ 0.19
SMARCB1-202ENST00000344921 CENPSQ8N2Z9 138 aa16.24■□□□□ 0.19
SMARCB1-202ENST00000344921 TRRAPQ9Y4A5 3859 aa16.24■□□□□ 0.19
SMARCB1-202ENST00000344921 PLA2G10O15496 165 aa16.23■□□□□ 0.19
SMARCB1-202ENST00000344921 CDS2O95674 445 aa16.23■□□□□ 0.19
SMARCB1-202ENST00000344921 TRGV3P03979 118 aa16.23■□□□□ 0.19
SMARCB1-202ENST00000344921 TPPP2P59282 170 aa16.23■□□□□ 0.19
SMARCB1-202ENST00000344921 CADM3Q8N126 398 aa16.23■□□□□ 0.19
SMARCB1-202ENST00000344921 GALNT14Q96FL9 552 aa16.23■□□□□ 0.19
SMARCB1-202ENST00000344921 HINT2Q9BX68 163 aa16.23■□□□□ 0.19
SMARCB1-202ENST00000344921 SLA2Q9H6Q3 261 aa16.23■□□□□ 0.19
SMARCB1-202ENST00000344921 FKBP11Q9NYL4 201 aa16.23■□□□□ 0.19
SMARCB1-202ENST00000344921 PRNDQ9UKY0 176 aa16.23■□□□□ 0.19
SMARCB1-202ENST00000344921 OR51B2Q9Y5P1 312 aa16.23■□□□□ 0.19
SMARCB1-202ENST00000344921 TEX22C9J3V5 150 aa16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 NDUFB6O95139 128 aa16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 FGF2P09038 288 aa16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 VAMP1P23763 118 aa16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 CDX1P47902 265 aaPredicted RBP16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 C8orf86Q6ZUL3 223 aa16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 RBPMSQ93062 196 aaKnown RBP16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 TEX50A0A1B0GTY4 177 aa16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 IGKV1-5P01602 117 aa16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 PF4P02776 101 aa16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 BTCP35070 178 aa16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 RGS21Q2M5E4 152 aa16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 TMEM268Q5VZI3 342 aa16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 TREML4Q6UXN2 200 aa16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 SLC25A42Q86VD7 318 aa16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 ZNF491Q8N8L2 437 aa16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 OR1L8Q8NGR8 309 aa16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 UBE2E2Q96LR5 201 aa16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 QTRT1Q9BXR0 403 aaKnown RBP16.22■□□□□ 0.19
SMARCB1-202ENST00000344921 C15orf61A6NNL5 157 aa16.21■□□□□ 0.19
SMARCB1-202ENST00000344921 SUPT4H1P63272 117 aaKnown RBP16.21■□□□□ 0.19
SMARCB1-202ENST00000344921 TMEM187Q14656 261 aa16.21■□□□□ 0.19
SMARCB1-202ENST00000344921 IZUMO4Q1ZYL8 232 aa16.21■□□□□ 0.19
SMARCB1-202ENST00000344921 SELENOHQ8IZQ5 122 aaKnown RBP16.21■□□□□ 0.19
SMARCB1-202ENST00000344921 TTC9CQ8N5M4 171 aa16.21■□□□□ 0.19
SMARCB1-202ENST00000344921 OR5B12Q96R08 314 aa16.21■□□□□ 0.19
SMARCB1-202ENST00000344921 PRR13Q9NZ81 148 aa16.21■□□□□ 0.19
SMARCB1-202ENST00000344921 PAIP2BQ9ULR5 123 aaKnown RBP16.21■□□□□ 0.19
SMARCB1-202ENST00000344921 A0A1B0GW64 132 aa16.2■□□□□ 0.18
SMARCB1-202ENST00000344921 H3BUA1 57 aa16.2■□□□□ 0.18
SMARCB1-202ENST00000344921 UPK1BO75841 260 aa16.2■□□□□ 0.18
SMARCB1-202ENST00000344921 TRAPPC2P0DI81 140 aa16.2■□□□□ 0.18
SMARCB1-202ENST00000344921 TRAPPC2BP0DI82 140 aa16.2■□□□□ 0.18
SMARCB1-202ENST00000344921 SLC6A1P30531 599 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms