RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 FAM223AQ8IWN6 122 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 OR6Q1Q8NGQ2 317 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 OR6F1Q8NGZ6 308 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 OR4A5Q8NH83 315 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 FANCD2OSQ96PS1 177 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 OR4C12Q96R67 309 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 PLEKHA2Q9HB19 425 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 HRASLSQ9HDD0 168 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 TMEM140Q9NV12 185 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 DMRT1Q9Y5R6 373 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 FAM25AB3EWG3 89 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 FAM25CB3EWG5 89 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 FAM25GB3EWG6 89 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 IGLV1-51P01701 117 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 REG1AP05451 166 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 CRYGCP07315 174 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 GP9P14770 177 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 CTRB1P17538 263 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 F2RP25116 425 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 PSMB6P28072 239 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 RCVRNP35243 200 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 SPCS2Q15005 226 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 C15orf32Q32M92 178 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 ZNF585BQ52M93 769 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 CTRB2Q6GPI1 263 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 MZT2AQ6P582 158 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 SLC25A42Q86VD7 318 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 NECAP1Q8NC96 275 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 OR9G4Q8NGQ1 327 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 CD300LFQ8TDQ1 290 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 FCAMRQ8WWV6 532 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 BORCS5Q969J3 196 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 WWC2-AS2Q96NR7 200 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 RSRP1Q9BUV0 290 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 ELOVL1Q9BW60 279 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 MIXL1Q9H2W2 232 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 COMMD9Q9P000 198 aa11□□□□□ -0.65
HMGN3-202ENST00000344726 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.99□□□□□ -0.65
HMGN3-202ENST00000344726 M0QYG6 137 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 GPR31O00270 319 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 NDUFB8O95169 186 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 LPAR6P43657 344 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 TSPAN5P62079 268 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 RPEL1Q2QD12 228 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 KLK9Q2XQG4 91 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 PHLDA2Q53GA4 152 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 DMBX1Q8NFW5 382 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 OR52I2Q8NH67 350 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 AP3S1Q92572 193 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 DGCR14Q96DF8 476 aaKnown RBP10.99□□□□□ -0.65
HMGN3-202ENST00000344726 ABHD1Q96SE0 405 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 AIFM2Q9BRQ8 373 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 EXTL2Q9UBQ6 330 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 KLK11Q9UBX7 282 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 FBXL7Q9UJT9 491 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 KLK9Q9UKQ9 250 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 SMAD5-AS1Q9Y6J3 95 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 S4R3C0 116 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 U3KQK5 164 aa10.99□□□□□ -0.65
HMGN3-202ENST00000344726 IGLC7A0M8Q6 106 aa10.98□□□□□ -0.65
HMGN3-202ENST00000344726 DPPA5A6NC42 116 aa10.98□□□□□ -0.65
HMGN3-202ENST00000344726 MARCH11A6NNE9 402 aa10.98□□□□□ -0.65
HMGN3-202ENST00000344726 PPP5D1E7EU14 171 aa10.98□□□□□ -0.65
HMGN3-202ENST00000344726 IGHV3-23P01764 117 aa10.98□□□□□ -0.65
HMGN3-202ENST00000344726 CSN3P07498 182 aa10.98□□□□□ -0.65
HMGN3-202ENST00000344726 NHLRC4P0CG21 123 aaPredicted RBP10.98□□□□□ -0.65
HMGN3-202ENST00000344726 CLVS1Q8IUQ0 354 aaPredicted RBP10.98□□□□□ -0.65
HMGN3-202ENST00000344726 SBSPONQ8IVN8 264 aa10.98□□□□□ -0.65
HMGN3-202ENST00000344726 CMTM1Q8IZ96 169 aa10.98□□□□□ -0.65
HMGN3-202ENST00000344726 LINC00528Q8N1L1 170 aa10.98□□□□□ -0.65
HMGN3-202ENST00000344726 OR10W1Q8NGF6 305 aa10.98□□□□□ -0.65
HMGN3-202ENST00000344726 CCDC140Q96MF4 163 aa10.98□□□□□ -0.65
HMGN3-202ENST00000344726 IGLV11-55A0A075B6I3 123 aa10.97□□□□□ -0.65
HMGN3-202ENST00000344726 CTDSP2O14595 271 aa10.97□□□□□ -0.65
HMGN3-202ENST00000344726 HLA-AP01891 365 aaKnown RBP10.97□□□□□ -0.65
HMGN3-202ENST00000344726 FRMD6-AS1P0C7T7 363 aa10.97□□□□□ -0.65
HMGN3-202ENST00000344726 G6PCP35575 357 aa10.97□□□□□ -0.65
HMGN3-202ENST00000344726 ADAMTSL5Q6ZMM2 481 aa10.97□□□□□ -0.65
HMGN3-202ENST00000344726 LAX1Q8IWV1 398 aa10.97□□□□□ -0.65
HMGN3-202ENST00000344726 NSG2Q9Y328 171 aa10.97□□□□□ -0.65
HMGN3-202ENST00000344726 DYNC2H1Q8NCM8 4307 aaKnown RBP10.96□□□□□ -0.65
HMGN3-202ENST00000344726 TEX50A0A1B0GTY4 177 aa10.96□□□□□ -0.65
HMGN3-202ENST00000344726 MFSD2BA6NFX1 497 aa10.96□□□□□ -0.65
HMGN3-202ENST00000344726 KRASP01116 189 aa10.96□□□□□ -0.65
HMGN3-202ENST00000344726 CD3DP04234 171 aa10.96□□□□□ -0.65
HMGN3-202ENST00000344726 FGF2P09038 288 aa10.96□□□□□ -0.65
HMGN3-202ENST00000344726 EDN2P20800 178 aa10.96□□□□□ -0.65
HMGN3-202ENST00000344726 UCP3P55916 312 aa10.96□□□□□ -0.65
HMGN3-202ENST00000344726 TBC1D26Q86UD7 250 aa10.96□□□□□ -0.65
HMGN3-202ENST00000344726 LHFPL1Q86WI0 220 aa10.96□□□□□ -0.65
HMGN3-202ENST00000344726 Q8N1Y9 231 aa10.96□□□□□ -0.65
HMGN3-202ENST00000344726 OR4D10Q8NGI6 311 aa10.96□□□□□ -0.65
HMGN3-202ENST00000344726 QTRT1Q9BXR0 403 aaKnown RBP10.96□□□□□ -0.65
HMGN3-202ENST00000344726 COMMD5Q9GZQ3 224 aa10.96□□□□□ -0.65
HMGN3-202ENST00000344726 SIGLEC8Q9NYZ4 499 aa10.96□□□□□ -0.65
HMGN3-202ENST00000344726 MTFP1Q9UDX5 166 aa10.96□□□□□ -0.65
HMGN3-202ENST00000344726 IZUMO1RA6ND01 250 aa10.95□□□□□ -0.66
HMGN3-202ENST00000344726 DBX1A6NMT0 343 aa10.95□□□□□ -0.66
HMGN3-202ENST00000344726 IGKV1-39P01597 117 aa10.95□□□□□ -0.66
HMGN3-202ENST00000344726 IGKV1D-39P04432 117 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms