RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 OR11H2Q8NH07 326 aa15.31■□□□□ 0.04
SMC4-201ENST00000344722 OTOFQ9HC10 1997 aa15.31■□□□□ 0.04
SMC4-201ENST00000344722 CCL4P13236 92 aa15.31■□□□□ 0.04
SMC4-201ENST00000344722 RIPPLY3P57055 190 aa15.31■□□□□ 0.04
SMC4-201ENST00000344722 TMEM78Q5T7P6 136 aa15.31■□□□□ 0.04
SMC4-201ENST00000344722 TEX38Q6PEX7 206 aa15.31■□□□□ 0.04
SMC4-201ENST00000344722 AGMATQ9BSE5 352 aa15.31■□□□□ 0.04
SMC4-201ENST00000344722 ZNF257Q9Y2Q1 563 aa15.31■□□□□ 0.04
SMC4-201ENST00000344722 PIKFYVEQ9Y2I7 2098 aa15.31■□□□□ 0.04
SMC4-201ENST00000344722 ANOS1P23352 680 aa15.31■□□□□ 0.04
SMC4-201ENST00000344722 HCP5Q6MZN7 132 aa15.31■□□□□ 0.04
SMC4-201ENST00000344722 PRELID3AQ96N28 172 aa15.31■□□□□ 0.04
SMC4-201ENST00000344722 FNDC4Q9H6D8 234 aaPredicted RBP15.31■□□□□ 0.04
SMC4-201ENST00000344722 ORAOV1Q8WV07 137 aa15.3■□□□□ 0.04
SMC4-201ENST00000344722 IGKV1-9A0A0C4DH69 117 aa15.3■□□□□ 0.04
SMC4-201ENST00000344722 NDUFS8O00217 210 aa15.3■□□□□ 0.04
SMC4-201ENST00000344722 IGFBP2P18065 325 aa15.3■□□□□ 0.04
SMC4-201ENST00000344722 LPAR2Q9HBW0 351 aa15.3■□□□□ 0.04
SMC4-201ENST00000344722 MRPL16Q9NX20 251 aaKnown RBP15.3■□□□□ 0.04
SMC4-201ENST00000344722 J3KRW8 73 aa15.3■□□□□ 0.04
SMC4-201ENST00000344722 SEC11AP67812 179 aa15.3■□□□□ 0.04
SMC4-201ENST00000344722 MST1LQ2TV78 715 aa15.3■□□□□ 0.04
SMC4-201ENST00000344722 FAM166AQ6J272 317 aa15.3■□□□□ 0.04
SMC4-201ENST00000344722 J3QW42 95 aa15.3■□□□□ 0.04
SMC4-201ENST00000344722 GOLT1AQ6ZVE7 132 aa15.3■□□□□ 0.04
SMC4-201ENST00000344722 LINC00305Q7Z4B0 112 aa15.3■□□□□ 0.04
SMC4-201ENST00000344722 FMC1Q96HJ9 113 aa15.3■□□□□ 0.04
SMC4-201ENST00000344722 COL11A2P13942 1736 aaPredicted RBP15.3■□□□□ 0.04
SMC4-201ENST00000344722 NAPSAO96009 420 aa15.3■□□□□ 0.04
SMC4-201ENST00000344722 VSIRQ9H7M9 311 aa15.3■□□□□ 0.04
SMC4-201ENST00000344722 NYNRINQ9P2P1 1898 aaKnown RBP15.29■□□□□ 0.04
SMC4-201ENST00000344722 A0A1B0GUT8 65 aa15.29■□□□□ 0.04
SMC4-201ENST00000344722 C17orf98A8MV24 154 aa15.29■□□□□ 0.04
SMC4-201ENST00000344722 ZNHIT1O43257 154 aa15.29■□□□□ 0.04
SMC4-201ENST00000344722 LGALS3P17931 250 aaKnown RBP15.29■□□□□ 0.04
SMC4-201ENST00000344722 EMP1P54849 157 aa15.29■□□□□ 0.04
SMC4-201ENST00000344722 PPIAL4DF5H284 164 aa15.29■□□□□ 0.04
SMC4-201ENST00000344722 TFF2Q03403 129 aa15.29■□□□□ 0.04
SMC4-201ENST00000344722 C10orf91Q5T1B1 145 aa15.29■□□□□ 0.04
SMC4-201ENST00000344722 OCC1Q8TAD7 63 aa15.29■□□□□ 0.04
SMC4-201ENST00000344722 COL4A5P29400 1685 aa15.29■□□□□ 0.04
SMC4-201ENST00000344722 PPIHO43447 177 aaKnown RBP15.29■□□□□ 0.04
SMC4-201ENST00000344722 UBE2V1Q13404 147 aa15.29■□□□□ 0.04
SMC4-201ENST00000344722 OR4A5Q8NH83 315 aa15.29■□□□□ 0.04
SMC4-201ENST00000344722 NPIPB3Q92617 1050 aa15.29■□□□□ 0.04
SMC4-201ENST00000344722 RNASE7Q9H1E1 156 aaKnown RBP15.29■□□□□ 0.04
SMC4-201ENST00000344722 SIPA1L1O43166 1804 aa15.29■□□□□ 0.04
SMC4-201ENST00000344722 TGFBR3LH3BV60 316 aa15.29■□□□□ 0.04
SMC4-201ENST00000344722 EREGO14944 169 aa15.29■□□□□ 0.04
SMC4-201ENST00000344722 UMODP07911 640 aa15.29■□□□□ 0.04
SMC4-201ENST00000344722 CCL13Q99616 98 aa15.29■□□□□ 0.04
SMC4-201ENST00000344722 MYO7AQ13402 2215 aa15.29■□□□□ 0.04
SMC4-201ENST00000344722 IGKV1D-13A0A0B4J2D9 117 aa15.28■□□□□ 0.04
SMC4-201ENST00000344722 IGKV1-13P0DP09 117 aa15.28■□□□□ 0.04
SMC4-201ENST00000344722 AMMECR1LQ6DCA0 310 aa15.28■□□□□ 0.04
SMC4-201ENST00000344722 IFI27L2Q9H2X8 130 aa15.28■□□□□ 0.04
SMC4-201ENST00000344722 NRXN2Q9P2S2 1712 aa15.28■□□□□ 0.04
SMC4-201ENST00000344722 IGKV1D-8A0A087WSZ0 117 aa15.28■□□□□ 0.04
SMC4-201ENST00000344722 HIGD1CA8MV81 97 aa15.28■□□□□ 0.04
SMC4-201ENST00000344722 C21orf140B9A014 251 aa15.28■□□□□ 0.04
SMC4-201ENST00000344722 KHDC1LQ5JSQ8 128 aa15.28■□□□□ 0.04
SMC4-201ENST00000344722 MIR17HGQ75NE6 70 aa15.28■□□□□ 0.04
SMC4-201ENST00000344722 CELA2AP08217 269 aa15.28■□□□□ 0.04
SMC4-201ENST00000344722 TMEM160Q9NX00 188 aa15.28■□□□□ 0.04
SMC4-201ENST00000344722 F5P12259 2224 aa15.28■□□□□ 0.04
SMC4-201ENST00000344722 TRAV8-6A0A0B4J262 113 aa15.28■□□□□ 0.04
SMC4-201ENST00000344722 PGPEP1LA6NFU8 196 aa15.28■□□□□ 0.04
SMC4-201ENST00000344722 C12orf77C9JDV5 145 aa15.28■□□□□ 0.04
SMC4-201ENST00000344722 Q6AWC8 147 aa15.28■□□□□ 0.04
SMC4-201ENST00000344722 ARRDC1-AS1Q9H2J1 176 aa15.28■□□□□ 0.04
SMC4-201ENST00000344722 ELOVL5Q9NYP7 299 aa15.27■□□□□ 0.04
SMC4-201ENST00000344722 HS3ST3B1Q9Y662 390 aa15.27■□□□□ 0.04
SMC4-201ENST00000344722 PPIAL4EA0A075B759 164 aa15.27■□□□□ 0.04
SMC4-201ENST00000344722 E9PQ18 207 aa15.27■□□□□ 0.04
SMC4-201ENST00000344722 PPIAL4FP0DN26 164 aa15.27■□□□□ 0.04
SMC4-201ENST00000344722 MBNL2Q5VZF2 373 aaKnown RBP15.27■□□□□ 0.04
SMC4-201ENST00000344722 GFRALQ6UXV0 394 aa15.27■□□□□ 0.04
SMC4-201ENST00000344722 RAB1CQ92928 201 aa15.27■□□□□ 0.04
SMC4-201ENST00000344722 CHCHD1Q96BP2 118 aaKnown RBP15.27■□□□□ 0.04
SMC4-201ENST00000344722 PPIAL4AQ9Y536 164 aa15.27■□□□□ 0.04
SMC4-201ENST00000344722 HILPDAQ9Y5L2 63 aa15.27■□□□□ 0.04
SMC4-201ENST00000344722 STAG3L3P0CL85 134 aa15.27■□□□□ 0.03
SMC4-201ENST00000344722 RELQ04864 619 aaPredicted RBP15.27■□□□□ 0.03
SMC4-201ENST00000344722 CHRNA10Q9GZZ6 450 aa15.27■□□□□ 0.03
SMC4-201ENST00000344722 ZNF703Q9H7S9 590 aaPredicted RBP15.27■□□□□ 0.03
SMC4-201ENST00000344722 TRAV30A0A087WSZ9 112 aa15.27■□□□□ 0.03
SMC4-201ENST00000344722 MS4A6AQ9H2W1 248 aa15.27■□□□□ 0.03
SMC4-201ENST00000344722 A0A1W2PRD5 423 aa15.26■□□□□ 0.03
SMC4-201ENST00000344722 A0A1W2PRF3 423 aa15.26■□□□□ 0.03
SMC4-201ENST00000344722 A0A1W2PRM7 423 aa15.26■□□□□ 0.03
SMC4-201ENST00000344722 ATP5LO75964 103 aa15.26■□□□□ 0.03
SMC4-201ENST00000344722 SPTBP11277 2137 aa15.26■□□□□ 0.03
SMC4-201ENST00000344722 TIMP3P35625 211 aa15.26■□□□□ 0.03
SMC4-201ENST00000344722 RNASEH2CQ8TDP1 164 aaKnown RBP15.26■□□□□ 0.03
SMC4-201ENST00000344722 NBEAP1P0C6P0 100 aa15.26■□□□□ 0.03
SMC4-201ENST00000344722 ADIPOQQ15848 244 aa15.26■□□□□ 0.03
SMC4-201ENST00000344722 OR2K2Q8NGT1 345 aa15.26■□□□□ 0.03
SMC4-201ENST00000344722 MEF2CQ06413 473 aaPredicted RBP15.26■□□□□ 0.03
SMC4-201ENST00000344722 TIMM23BQ5SRD1 257 aa15.26■□□□□ 0.03
SMC4-201ENST00000344722 TMUB1Q9BVT8 246 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms