RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 ANAPC16Q96DE5 110 aa6.61□□□□□ -1.35
KPNA1-201ENST00000344337 LIME1Q9H400 295 aa6.61□□□□□ -1.35
KPNA1-201ENST00000344337 HCFC1P51610 2035 aa6.61□□□□□ -1.35
KPNA1-201ENST00000344337 F5H697 171 aa6.61□□□□□ -1.35
KPNA1-201ENST00000344337 P01737 135 aa6.61□□□□□ -1.35
KPNA1-201ENST00000344337 PPIFP30405 207 aaKnown RBP6.61□□□□□ -1.35
KPNA1-201ENST00000344337 CFHR1Q03591 330 aa6.61□□□□□ -1.35
KPNA1-201ENST00000344337 SMIM15Q7Z3B0 74 aa6.61□□□□□ -1.35
KPNA1-201ENST00000344337 OR2M7Q8NG81 312 aa6.61□□□□□ -1.35
KPNA1-201ENST00000344337 OR51B2Q9Y5P1 312 aa6.61□□□□□ -1.35
KPNA1-201ENST00000344337 LINC00869P0C866 280 aa6.61□□□□□ -1.35
KPNA1-201ENST00000344337 FHL1Q13642 323 aa6.61□□□□□ -1.35
KPNA1-201ENST00000344337 SPATA31B1PQ5VZV4 182 aa6.61□□□□□ -1.35
KPNA1-201ENST00000344337 MTURNQ8N3F0 131 aa6.61□□□□□ -1.35
KPNA1-201ENST00000344337 LINC00479Q96M42 142 aa6.61□□□□□ -1.35
KPNA1-201ENST00000344337 OR2V2Q96R30 315 aa6.61□□□□□ -1.35
KPNA1-201ENST00000344337 FNDC4Q9H6D8 234 aaPredicted RBP6.61□□□□□ -1.35
KPNA1-201ENST00000344337 MYO18BQ8IUG5 2567 aa6.61□□□□□ -1.35
KPNA1-201ENST00000344337 NUDT3O95989 172 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 HIST1H1BP16401 226 aaKnown RBP6.6□□□□□ -1.35
KPNA1-201ENST00000344337 PRDX2P32119 198 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 NBEAQ8NFP9 2946 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 PPIAL4DF5H284 164 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 NKX2-8O15522 239 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 IL3RAP26951 378 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 MIR17HGQ75NE6 70 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 SEMA5BQ9P283 1151 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 IGHV3OR16-10A0A075B7F0 116 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 SPAARA0A1B0GVQ0 90 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 NKX6-3A6NJ46 265 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 SLC25A17O43808 307 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 SUB1P53999 127 aaKnown RBP eCLIP6.6□□□□□ -1.35
KPNA1-201ENST00000344337 CEACAM21Q3KPI0 293 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 MMD2Q8IY49 270 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 DEFB123Q8N688 67 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 OR13A1Q8NGR1 328 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 GALNT14Q96FL9 552 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 EPHA8P29322 1005 aaPredicted RBP6.6□□□□□ -1.35
KPNA1-201ENST00000344337 RNFT1Q5M7Z0 435 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 C20orf204Q6ZNR8 217 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 WFDC12Q8WWY7 111 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 TRAV5A0A0B4J249 113 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 OOEPA6NGQ2 149 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 IGKV3-20P01619 116 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 UBALD2Q8IYN6 164 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 OR5R1Q8NH85 324 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 TRANK1O15050 2925 aa6.6□□□□□ -1.35
KPNA1-201ENST00000344337 DPRXA6NFQ7 191 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 CXorf1O96002 111 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 TYMSP04818 313 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 NPSP0C0P6 89 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 CSN1S1P47710 185 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 RPL8P62917 257 aaKnown RBP6.59□□□□□ -1.35
KPNA1-201ENST00000344337 OCC1Q8TAD7 63 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 ITLN1Q8WWA0 313 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 GMPPAQ96IJ6 420 aaPredicted RBP6.59□□□□□ -1.35
KPNA1-201ENST00000344337 MAP1LC3CQ9BXW4 147 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 TTTY12Q9BZ98 90 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 LOC107984156A0A0G2JMH3 177 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 H0Y980 276 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 CD5P06127 495 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 TRA2AQ13595 282 aaKnown RBP eCLIP6.59□□□□□ -1.35
KPNA1-201ENST00000344337 MBNL2Q5VZF2 373 aaKnown RBP6.59□□□□□ -1.35
KPNA1-201ENST00000344337 Q6ZRM9 215 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 ARL17AQ8IVW1 177 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 NPIPB3Q92617 1050 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 SDF2L1Q9HCN8 221 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 PLXNA3P51805 1871 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 LRRC30A6NM36 301 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 PPIHO43447 177 aaKnown RBP6.59□□□□□ -1.35
KPNA1-201ENST00000344337 PYYP10082 97 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 CDKN1AP38936 164 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 TWIST1Q15672 202 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 OR10W1Q8NGF6 305 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 IGFBPL1Q8WX77 278 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 MS4A5Q9H3V2 200 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 FGF16O43320 207 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 CA2P00918 260 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 CD99P14209 185 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 ZNF738Q8NE65 137 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 PAXXQ9BUH6 204 aa6.59□□□□□ -1.35
KPNA1-201ENST00000344337 C7orf71A4D174 169 aa6.59□□□□□ -1.36
KPNA1-201ENST00000344337 KBTBD11O94819 623 aa6.59□□□□□ -1.36
KPNA1-201ENST00000344337 MGPP08493 103 aa6.59□□□□□ -1.36
KPNA1-201ENST00000344337 LDLRAD2Q5SZI1 272 aa6.59□□□□□ -1.36
KPNA1-201ENST00000344337 C10orf113Q5VZT2 155 aa6.59□□□□□ -1.36
KPNA1-201ENST00000344337 SPEM1Q8N4L4 309 aa6.59□□□□□ -1.36
KPNA1-201ENST00000344337 SRSF12Q8WXF0 261 aaKnown RBP6.59□□□□□ -1.36
KPNA1-201ENST00000344337 FGF11Q92914 225 aa6.59□□□□□ -1.36
KPNA1-201ENST00000344337 PTX4Q96A99 478 aa6.59□□□□□ -1.36
KPNA1-201ENST00000344337 MPV17P39210 176 aa6.58□□□□□ -1.36
KPNA1-201ENST00000344337 TMEM177Q53S58 311 aa6.58□□□□□ -1.36
KPNA1-201ENST00000344337 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.58□□□□□ -1.36
KPNA1-201ENST00000344337 NPCDR1Q9BY65 106 aa6.58□□□□□ -1.36
KPNA1-201ENST00000344337 NOTCH2Q04721 2471 aa6.58□□□□□ -1.36
KPNA1-201ENST00000344337 PINLYPA6NC86 204 aa6.58□□□□□ -1.36
KPNA1-201ENST00000344337 GAGE10A6NGK3 116 aa6.58□□□□□ -1.36
KPNA1-201ENST00000344337 BPIFB3P59826 476 aa6.58□□□□□ -1.36
KPNA1-201ENST00000344337 PRDM13Q9H4Q3 707 aa6.58□□□□□ -1.36
KPNA1-201ENST00000344337 IGKV3D-11A0A0A0MRZ8 115 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms