RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 H3BUA1 57 aa13.95□□□□□ -0.18
USF2-202ENST00000343550 UPK2O00526 184 aa13.95□□□□□ -0.18
USF2-202ENST00000343550 BRI3O95415 125 aa13.95□□□□□ -0.18
USF2-202ENST00000343550 ETV6P41212 452 aa13.95□□□□□ -0.18
USF2-202ENST00000343550 PPP5CP53041 499 aa13.95□□□□□ -0.18
USF2-202ENST00000343550 RPL8P62917 257 aaKnown RBP13.95□□□□□ -0.18
USF2-202ENST00000343550 OR6Q1Q8NGQ2 317 aa13.95□□□□□ -0.18
USF2-202ENST00000343550 ZFAND1Q8TCF1 268 aa13.95□□□□□ -0.18
USF2-202ENST00000343550 MARCH1Q8TCQ1 289 aa13.95□□□□□ -0.18
USF2-202ENST00000343550 OR5B12Q96R08 314 aa13.95□□□□□ -0.18
USF2-202ENST00000343550 B9D2Q9BPU9 175 aa13.95□□□□□ -0.18
USF2-202ENST00000343550 TMEM140Q9NV12 185 aa13.95□□□□□ -0.18
USF2-202ENST00000343550 MARCH11A6NNE9 402 aa13.94□□□□□ -0.18
USF2-202ENST00000343550 KRASP01116 189 aa13.94□□□□□ -0.18
USF2-202ENST00000343550 TRGV3P03979 118 aa13.94□□□□□ -0.18
USF2-202ENST00000343550 RPA2P15927 270 aa13.94□□□□□ -0.18
USF2-202ENST00000343550 HLA-GP17693 338 aa13.94□□□□□ -0.18
USF2-202ENST00000343550 PIGPP57054 158 aa13.94□□□□□ -0.18
USF2-202ENST00000343550 TPPP2P59282 170 aa13.94□□□□□ -0.18
USF2-202ENST00000343550 CADM3Q8N126 398 aa13.94□□□□□ -0.18
USF2-202ENST00000343550 Q8N402 240 aa13.94□□□□□ -0.18
USF2-202ENST00000343550 ADAD2Q8NCV1 583 aaKnown RBP13.94□□□□□ -0.18
USF2-202ENST00000343550 OR11H1Q8NG94 326 aa13.94□□□□□ -0.18
USF2-202ENST00000343550 OR13C8Q8NGS7 320 aa13.94□□□□□ -0.18
USF2-202ENST00000343550 ZMAT5Q9UDW3 170 aaKnown RBP13.94□□□□□ -0.18
USF2-202ENST00000343550 A0A1B0GW64 132 aa13.93□□□□□ -0.18
USF2-202ENST00000343550 HMX3A6NHT5 357 aa13.93□□□□□ -0.18
USF2-202ENST00000343550 TEX22C9J3V5 150 aa13.93□□□□□ -0.18
USF2-202ENST00000343550 OR9G9P0C7N8 305 aa13.93□□□□□ -0.18
USF2-202ENST00000343550 MYOD1P15172 320 aa13.93□□□□□ -0.18
USF2-202ENST00000343550 RPL27AP46776 148 aaKnown RBP13.93□□□□□ -0.18
USF2-202ENST00000343550 RAB25P57735 213 aa13.93□□□□□ -0.18
USF2-202ENST00000343550 DCTN2Q13561 401 aaKnown RBP13.93□□□□□ -0.18
USF2-202ENST00000343550 SPANXN2Q5MJ10 180 aa13.93□□□□□ -0.18
USF2-202ENST00000343550 TTC9CQ8N5M4 171 aa13.93□□□□□ -0.18
USF2-202ENST00000343550 OR51S1Q8NGJ8 323 aa13.93□□□□□ -0.18
USF2-202ENST00000343550 CTSDP07339 412 aaPredicted RBP13.92□□□□□ -0.18
USF2-202ENST00000343550 FGF2P09038 288 aa13.92□□□□□ -0.18
USF2-202ENST00000343550 G6PCP35575 357 aa13.92□□□□□ -0.18
USF2-202ENST00000343550 ECI1P42126 302 aa13.92□□□□□ -0.18
USF2-202ENST00000343550 ERVK-16P61578 105 aa13.92□□□□□ -0.18
USF2-202ENST00000343550 FHL3Q13643 280 aa13.92□□□□□ -0.18
USF2-202ENST00000343550 OR1N2Q8NGR9 330 aa13.92□□□□□ -0.18
USF2-202ENST00000343550 TRIM63Q969Q1 353 aa13.92□□□□□ -0.18
USF2-202ENST00000343550 FYTTD1Q96QD9 318 aaKnown RBP13.92□□□□□ -0.18
USF2-202ENST00000343550 PRRT1Q99946 306 aa13.92□□□□□ -0.18
USF2-202ENST00000343550 RTBDNQ9BSG5 229 aaPredicted RBP13.92□□□□□ -0.18
USF2-202ENST00000343550 ALX4Q9H161 411 aaPredicted RBP13.92□□□□□ -0.18
USF2-202ENST00000343550 COA4Q9NYJ1 87 aa13.92□□□□□ -0.18
USF2-202ENST00000343550 CGB1A6NKQ9 187 aa13.91□□□□□ -0.18
USF2-202ENST00000343550 IGKV1-39P01597 117 aa13.91□□□□□ -0.18
USF2-202ENST00000343550 IGHV3-11P01762 117 aa13.91□□□□□ -0.18
USF2-202ENST00000343550 IGKV1D-39P04432 117 aa13.91□□□□□ -0.18
USF2-202ENST00000343550 KLF9Q13886 244 aaPredicted RBP13.91□□□□□ -0.18
USF2-202ENST00000343550 SURF2Q15527 256 aaPredicted RBP13.91□□□□□ -0.18
USF2-202ENST00000343550 SLC2A8Q9NY64 477 aa13.91□□□□□ -0.18
USF2-202ENST00000343550 COPZ2Q9P299 210 aa13.91□□□□□ -0.18
USF2-202ENST00000343550 GPR132Q9UNW8 380 aa13.91□□□□□ -0.18
USF2-202ENST00000343550 LGALS1P09382 135 aaKnown RBP13.9□□□□□ -0.18
USF2-202ENST00000343550 OR2B8PP59922 312 aa13.9□□□□□ -0.18
USF2-202ENST00000343550 SEC22AQ96IW7 307 aa13.9□□□□□ -0.18
USF2-202ENST00000343550 TP53RKQ96S44 253 aa13.9□□□□□ -0.18
USF2-202ENST00000343550 COMMD5Q9GZQ3 224 aa13.9□□□□□ -0.18
USF2-202ENST00000343550 SCP2D1Q9UJQ7 156 aa13.9□□□□□ -0.18
USF2-202ENST00000343550 A0A0G2JLM5 398 aa13.9□□□□□ -0.19
USF2-202ENST00000343550 C3orf85A0A1B0GTC6 90 aa13.9□□□□□ -0.19
USF2-202ENST00000343550 H0Y980 276 aa13.9□□□□□ -0.19
USF2-202ENST00000343550 RBMXL2O75526 392 aaKnown RBP13.9□□□□□ -0.19
USF2-202ENST00000343550 PRH1P02810 166 aa13.9□□□□□ -0.19
USF2-202ENST00000343550 SERPINE2P07093 398 aa13.9□□□□□ -0.19
USF2-202ENST00000343550 ZNF616Q08AN1 781 aa13.9□□□□□ -0.19
USF2-202ENST00000343550 SLC25A42Q86VD7 318 aa13.9□□□□□ -0.19
USF2-202ENST00000343550 TOMM5Q8N4H5 51 aa13.9□□□□□ -0.19
USF2-202ENST00000343550 CCDC71LQ8N9Z2 235 aa13.9□□□□□ -0.19
USF2-202ENST00000343550 SRRQ9GZT4 340 aa13.9□□□□□ -0.19
USF2-202ENST00000343550 C5orf66Q9H5L9 145 aa13.9□□□□□ -0.19
USF2-202ENST00000343550 MCUBQ9NWR8 336 aa13.9□□□□□ -0.19
USF2-202ENST00000343550 TRBV9A0A0B4J1U6 114 aa13.89□□□□□ -0.19
USF2-202ENST00000343550 TEX50A0A1B0GTY4 177 aa13.89□□□□□ -0.19
USF2-202ENST00000343550 C13orf42A0A1B0GVH6 325 aa13.89□□□□□ -0.19
USF2-202ENST00000343550 NPIPB5A8MRT5 1133 aa13.89□□□□□ -0.19
USF2-202ENST00000343550 CRYGCP07315 174 aa13.89□□□□□ -0.19
USF2-202ENST00000343550 ZNF45Q02386 682 aa13.89□□□□□ -0.19
USF2-202ENST00000343550 SP6Q3SY56 376 aa13.89□□□□□ -0.19
USF2-202ENST00000343550 GDPD1Q8N9F7 314 aa13.89□□□□□ -0.19
USF2-202ENST00000343550 USMG5Q96IX5 58 aa13.89□□□□□ -0.19
USF2-202ENST00000343550 C14orf166Q9Y224 244 aaKnown RBP13.89□□□□□ -0.19
USF2-202ENST00000343550 ZNF257Q9Y2Q1 563 aa13.89□□□□□ -0.19
USF2-202ENST00000343550 NSG2Q9Y328 171 aa13.89□□□□□ -0.19
USF2-202ENST00000343550 DNAH9Q9NYC9 4486 aa13.89□□□□□ -0.19
USF2-202ENST00000343550 NBEAL2Q6ZNJ1 2754 aa13.88□□□□□ -0.19
USF2-202ENST00000343550 A6NHS1 94 aa13.88□□□□□ -0.19
USF2-202ENST00000343550 SNAPC5O75971 98 aa13.88□□□□□ -0.19
USF2-202ENST00000343550 HSPB1P04792 205 aaKnown RBP13.88□□□□□ -0.19
USF2-202ENST00000343550 AREGP15514 252 aa13.88□□□□□ -0.19
USF2-202ENST00000343550 PSMB6P28072 239 aa13.88□□□□□ -0.19
USF2-202ENST00000343550 AP3S2P59780 193 aa13.88□□□□□ -0.19
USF2-202ENST00000343550 WWC2-AS2Q96NR7 200 aa13.88□□□□□ -0.19
USF2-202ENST00000343550 OR8U8P0C7N1 319 aa13.87□□□□□ -0.19
USF2-202ENST00000343550 DEFA5Q01523 94 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms