RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 TRAV3A0A0B4J244 114 aa17.29■□□□□ 0.36
RBM38-201ENST00000342690 A0A0B4J2A0 478 aa17.29■□□□□ 0.36
RBM38-201ENST00000342690 ATP6V0E1O15342 81 aa17.29■□□□□ 0.36
RBM38-201ENST00000342690 PRAF2O60831 178 aa17.29■□□□□ 0.36
RBM38-201ENST00000342690 IL5P05113 134 aa17.29■□□□□ 0.36
RBM38-201ENST00000342690 OR9G9P0C7N8 305 aa17.29■□□□□ 0.36
RBM38-201ENST00000342690 HLA-GP17693 338 aa17.29■□□□□ 0.36
RBM38-201ENST00000342690 GRPEL2Q8TAA5 225 aa17.29■□□□□ 0.36
RBM38-201ENST00000342690 ZNF431Q8TF32 576 aaPredicted RBP17.29■□□□□ 0.36
RBM38-201ENST00000342690 LSM10Q969L4 123 aaKnown RBP17.29■□□□□ 0.36
RBM38-201ENST00000342690 PHB2Q99623 299 aa17.29■□□□□ 0.36
RBM38-201ENST00000342690 SEC22CQ9BRL7 303 aa17.29■□□□□ 0.36
RBM38-201ENST00000342690 FKBP11Q9NYL4 201 aa17.29■□□□□ 0.36
RBM38-201ENST00000342690 SHPKQ9UHJ6 478 aa17.29■□□□□ 0.36
RBM38-201ENST00000342690 PRNDQ9UKY0 176 aa17.29■□□□□ 0.36
RBM38-201ENST00000342690 RBMXL2O75526 392 aaKnown RBP17.28■□□□□ 0.36
RBM38-201ENST00000342690 P0C879 139 aa17.28■□□□□ 0.36
RBM38-201ENST00000342690 VDAC1P21796 283 aa17.28■□□□□ 0.36
RBM38-201ENST00000342690 NDPQ00604 133 aa17.28■□□□□ 0.36
RBM38-201ENST00000342690 SRSF12Q8WXF0 261 aaKnown RBP17.28■□□□□ 0.36
RBM38-201ENST00000342690 GON7Q9BXV9 100 aa17.28■□□□□ 0.36
RBM38-201ENST00000342690 COMMD5Q9GZQ3 224 aa17.28■□□□□ 0.36
RBM38-201ENST00000342690 NSG2Q9Y328 171 aa17.28■□□□□ 0.36
RBM38-201ENST00000342690 TENM1Q9UKZ4 2725 aa17.28■□□□□ 0.36
RBM38-201ENST00000342690 C15orf61A6NNL5 157 aa17.27■□□□□ 0.36
RBM38-201ENST00000342690 IGF1P05019 195 aa17.27■□□□□ 0.36
RBM38-201ENST00000342690 RPL27AP46776 148 aaKnown RBP17.27■□□□□ 0.36
RBM38-201ENST00000342690 OR2B8PP59922 312 aa17.27■□□□□ 0.36
RBM38-201ENST00000342690 TMEM267Q0VDI3 215 aaPredicted RBP17.27■□□□□ 0.36
RBM38-201ENST00000342690 SHISA2Q6UWI4 295 aa17.27■□□□□ 0.36
RBM38-201ENST00000342690 LYZL2Q7Z4W2 148 aa17.27■□□□□ 0.36
RBM38-201ENST00000342690 STPG2Q8N412 459 aa17.27■□□□□ 0.36
RBM38-201ENST00000342690 CHPT1Q8WUD6 406 aa17.27■□□□□ 0.36
RBM38-201ENST00000342690 MITD1Q8WV92 249 aa17.27■□□□□ 0.36
RBM38-201ENST00000342690 CITED1Q99966 193 aa17.27■□□□□ 0.36
RBM38-201ENST00000342690 ZNF580Q9UK33 172 aa17.27■□□□□ 0.36
RBM38-201ENST00000342690 A0A0G2JRQ6 117 aa17.26■□□□□ 0.35
RBM38-201ENST00000342690 SSBP2P81877 361 aaPredicted RBP17.26■□□□□ 0.35
RBM38-201ENST00000342690 IZUMO4Q1ZYL8 232 aa17.26■□□□□ 0.35
RBM38-201ENST00000342690 C10orf99Q6UWK7 81 aa17.26■□□□□ 0.35
RBM38-201ENST00000342690 SGMS2Q8NHU3 365 aa17.26■□□□□ 0.35
RBM38-201ENST00000342690 SPIN2AQ99865 258 aa17.26■□□□□ 0.35
RBM38-201ENST00000342690 SPIN2BQ9BPZ2 258 aa17.26■□□□□ 0.35
RBM38-201ENST00000342690 FAM103A1Q9BTL3 118 aaKnown RBP17.26■□□□□ 0.35
RBM38-201ENST00000342690 TMEM14BQ9NUH8 114 aa17.26■□□□□ 0.35
RBM38-201ENST00000342690 FOXA2Q9Y261 457 aaPredicted RBP17.26■□□□□ 0.35
RBM38-201ENST00000342690 TMED3Q9Y3Q3 217 aa17.26■□□□□ 0.35
RBM38-201ENST00000342690 OR51B2Q9Y5P1 312 aa17.26■□□□□ 0.35
RBM38-201ENST00000342690 STAB1Q9NY15 2570 aa17.26■□□□□ 0.35
RBM38-201ENST00000342690 DNHD1Q96M86 4753 aa17.25■□□□□ 0.35
RBM38-201ENST00000342690 TRAV41A0A0B4J266 112 aa17.25■□□□□ 0.35
RBM38-201ENST00000342690 CRIP2P52943 208 aaPredicted RBP17.25■□□□□ 0.35
RBM38-201ENST00000342690 SLC35B1P78383 322 aa17.25■□□□□ 0.35
RBM38-201ENST00000342690 ECSCRQ19T08 205 aa17.25■□□□□ 0.35
RBM38-201ENST00000342690 C10orf55Q5SWW7 151 aa17.25■□□□□ 0.35
RBM38-201ENST00000342690 HIST2H2BDQ6DRA6 164 aa17.25■□□□□ 0.35
RBM38-201ENST00000342690 CENPVQ7Z7K6 275 aaPredicted RBP17.25■□□□□ 0.35
RBM38-201ENST00000342690 C11orf44Q8N8P7 122 aa17.25■□□□□ 0.35
RBM38-201ENST00000342690 GPR146Q96CH1 333 aa17.25■□□□□ 0.35
RBM38-201ENST00000342690 FBXO7Q9Y3I1 522 aa17.25■□□□□ 0.35
RBM38-201ENST00000342690 PSMB11A5LHX3 300 aa17.24■□□□□ 0.35
RBM38-201ENST00000342690 MSGN1A6NI15 193 aa17.24■□□□□ 0.35
RBM38-201ENST00000342690 IFNA21P01568 189 aa17.24■□□□□ 0.35
RBM38-201ENST00000342690 HOXB5P09067 269 aa17.24■□□□□ 0.35
RBM38-201ENST00000342690 SULT1A3P0DMM9 295 aa17.24■□□□□ 0.35
RBM38-201ENST00000342690 SULT1A4P0DMN0 295 aa17.24■□□□□ 0.35
RBM38-201ENST00000342690 CD28P10747 220 aa17.24■□□□□ 0.35
RBM38-201ENST00000342690 NMSQ5H8A3 153 aa17.24■□□□□ 0.35
RBM38-201ENST00000342690 UNQ5815/PRO19632Q6UWF5 114 aa17.24■□□□□ 0.35
RBM38-201ENST00000342690 C12orf45Q8N5I9 185 aaPredicted RBP17.24■□□□□ 0.35
RBM38-201ENST00000342690 OR5AU1Q8NGC0 362 aa17.24■□□□□ 0.35
RBM38-201ENST00000342690 OR1L8Q8NGR8 309 aa17.24■□□□□ 0.35
RBM38-201ENST00000342690 OR5B3Q8NH48 314 aa17.24■□□□□ 0.35
RBM38-201ENST00000342690 FYTTD1Q96QD9 318 aaKnown RBP17.24■□□□□ 0.35
RBM38-201ENST00000342690 PDCD10Q9BUL8 212 aa17.24■□□□□ 0.35
RBM38-201ENST00000342690 CACNG5Q9UF02 275 aa17.24■□□□□ 0.35
RBM38-201ENST00000342690 WSB1Q9Y6I7 421 aa17.24■□□□□ 0.35
RBM38-201ENST00000342690 A0A0B4J293 547 aa17.23■□□□□ 0.35
RBM38-201ENST00000342690 SNRPGP15A8MWD9 76 aa17.23■□□□□ 0.35
RBM38-201ENST00000342690 FBXO24O75426 580 aa17.23■□□□□ 0.35
RBM38-201ENST00000342690 OPN1MWP04001 364 aa17.23■□□□□ 0.35
RBM38-201ENST00000342690 OPN1MW2P0DN77 364 aa17.23■□□□□ 0.35
RBM38-201ENST00000342690 OPN1MW3P0DN78 364 aa17.23■□□□□ 0.35
RBM38-201ENST00000342690 EGR2P11161 476 aaPredicted RBP17.23■□□□□ 0.35
RBM38-201ENST00000342690 MYOD1P15172 320 aa17.23■□□□□ 0.35
RBM38-201ENST00000342690 SMCO1Q147U7 214 aa17.23■□□□□ 0.35
RBM38-201ENST00000342690 THOC7Q6I9Y2 204 aaKnown RBP17.23■□□□□ 0.35
RBM38-201ENST00000342690 ZNF329Q86UD4 541 aa17.23■□□□□ 0.35
RBM38-201ENST00000342690 MINDY2Q8NBR6 621 aa17.23■□□□□ 0.35
RBM38-201ENST00000342690 UXS1Q8NBZ7 420 aa17.23■□□□□ 0.35
RBM38-201ENST00000342690 LFNGQ8NES3 379 aa17.23■□□□□ 0.35
RBM38-201ENST00000342690 TMEM68Q96MH6 324 aa17.23■□□□□ 0.35
RBM38-201ENST00000342690 QTRT1Q9BXR0 403 aaKnown RBP17.23■□□□□ 0.35
RBM38-201ENST00000342690 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.23■□□□□ 0.35
RBM38-201ENST00000342690 ZNF257Q9Y2Q1 563 aa17.23■□□□□ 0.35
RBM38-201ENST00000342690 TEX50A0A1B0GTY4 177 aa17.22■□□□□ 0.35
RBM38-201ENST00000342690 A0A1B0GU03 582 aa17.22■□□□□ 0.35
RBM38-201ENST00000342690 PLXNB1O43157 2135 aa17.22■□□□□ 0.35
RBM38-201ENST00000342690 TRAPPC2P0DI81 140 aa17.22■□□□□ 0.35
RBM38-201ENST00000342690 TRAPPC2BP0DI82 140 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms