RNA–Protein interactions for RNA: ENST00000342216.8

PKN1-202, Transcript of protein kinase N1, humanhuman

TSL 2 BASIC

Gene PKN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-202ENST00000342216 MT-CO2P00403 227 aa12.51□□□□□ -0.41
PKN1-202ENST00000342216 GCHFRP30047 84 aa12.51□□□□□ -0.41
PKN1-202ENST00000342216 CAMPP49913 170 aa12.51□□□□□ -0.41
PKN1-202ENST00000342216 PDLIM3Q53GG5 364 aaPredicted RBP12.51□□□□□ -0.41
PKN1-202ENST00000342216 GDF5OSQ5U4N7 250 aa12.51□□□□□ -0.41
PKN1-202ENST00000342216 C7orf61Q8IZ16 206 aa12.51□□□□□ -0.41
PKN1-202ENST00000342216 AP1S3Q96PC3 154 aa12.51□□□□□ -0.41
PKN1-202ENST00000342216 COMMD5Q9GZQ3 224 aa12.51□□□□□ -0.41
PKN1-202ENST00000342216 ST20Q9HBF5 79 aa12.51□□□□□ -0.41
PKN1-202ENST00000342216 FER1L5A0AVI2 2057 aa12.51□□□□□ -0.41
PKN1-202ENST00000342216 ACTL6BO94805 426 aa12.51□□□□□ -0.41
PKN1-202ENST00000342216 FGF12P61328 243 aa12.51□□□□□ -0.41
PKN1-202ENST00000342216 NBEAQ8NFP9 2946 aa12.5□□□□□ -0.41
PKN1-202ENST00000342216 EXPH5Q8NEV8 1989 aa12.5□□□□□ -0.41
PKN1-202ENST00000342216 HELTA6NFD8 242 aa12.5□□□□□ -0.41
PKN1-202ENST00000342216 CCL2P13500 99 aa12.5□□□□□ -0.41
PKN1-202ENST00000342216 KIR2DL1P43626 348 aaPredicted RBP12.5□□□□□ -0.41
PKN1-202ENST00000342216 RPL30P62888 115 aaKnown RBP12.5□□□□□ -0.41
PKN1-202ENST00000342216 C10orf128Q5T292 105 aa12.5□□□□□ -0.41
PKN1-202ENST00000342216 UFSP1Q6NVU6 142 aa12.5□□□□□ -0.41
PKN1-202ENST00000342216 SSX8Q7RTT4 187 aa12.5□□□□□ -0.41
PKN1-202ENST00000342216 EML6Q6ZMW3 1958 aa12.5□□□□□ -0.41
PKN1-202ENST00000342216 FBLL1A6NHQ2 334 aaKnown RBP12.5□□□□□ -0.41
PKN1-202ENST00000342216 AHRRA9YTQ3 701 aa12.5□□□□□ -0.41
PKN1-202ENST00000342216 MFAP2P55001 183 aa12.5□□□□□ -0.41
PKN1-202ENST00000342216 FOXA3P55318 350 aaPredicted RBP12.5□□□□□ -0.41
PKN1-202ENST00000342216 MEF2CQ06413 473 aaPredicted RBP12.5□□□□□ -0.41
PKN1-202ENST00000342216 GCM1Q9NP62 436 aa12.5□□□□□ -0.41
PKN1-202ENST00000342216 WDR83OSQ9Y284 106 aa12.5□□□□□ -0.41
PKN1-202ENST00000342216 A0A1W2PQF6 199 aa12.49□□□□□ -0.41
PKN1-202ENST00000342216 TRAPPC2LH3BP13 241 aa12.49□□□□□ -0.41
PKN1-202ENST00000342216 GPR183P32249 361 aa12.49□□□□□ -0.41
PKN1-202ENST00000342216 CEACAM3P40198 252 aa12.49□□□□□ -0.41
PKN1-202ENST00000342216 PLP1P60201 277 aa12.49□□□□□ -0.41
PKN1-202ENST00000342216 CHODLQ9H9P2 273 aa12.49□□□□□ -0.41
PKN1-202ENST00000342216 R4GN57 208 aa12.49□□□□□ -0.41
PKN1-202ENST00000342216 KNTC1P50748 2209 aa12.49□□□□□ -0.41
PKN1-202ENST00000342216 PPIAL4EA0A075B759 164 aa12.49□□□□□ -0.41
PKN1-202ENST00000342216 PPIAL4CA0A0B4J2A2 164 aa12.49□□□□□ -0.41
PKN1-202ENST00000342216 C15orf62A8K5M9 175 aa12.49□□□□□ -0.41
PKN1-202ENST00000342216 FAM90A26D6RGX4 464 aa12.49□□□□□ -0.41
PKN1-202ENST00000342216 PPIAL4FP0DN26 164 aa12.49□□□□□ -0.41
PKN1-202ENST00000342216 SUMO3P55854 103 aaPredicted RBP12.49□□□□□ -0.41
PKN1-202ENST00000342216 VWC2Q2TAL6 325 aa12.49□□□□□ -0.41
PKN1-202ENST00000342216 IBA57Q5T440 356 aaKnown RBP12.49□□□□□ -0.41
PKN1-202ENST00000342216 RAB1CQ92928 201 aa12.49□□□□□ -0.41
PKN1-202ENST00000342216 PERPQ96FX8 193 aa12.49□□□□□ -0.41
PKN1-202ENST00000342216 HEATR1Q9H583 2144 aaKnown RBP12.49□□□□□ -0.41
PKN1-202ENST00000342216 TRAV24A0A0B4J272 114 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 HNRNPA1P09651 372 aaKnown RBP eCLIP12.48□□□□□ -0.41
PKN1-202ENST00000342216 GTF2H5Q6ZYL4 71 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 TMEM54Q969K7 222 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 MGST2Q99735 147 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.48□□□□□ -0.41
PKN1-202ENST00000342216 TRGV10A0A0A0MS01 117 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 C9orf172C9J069 976 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 FABP6P51161 128 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 YAF2Q8IY57 180 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 URB1-AS1Q96HZ7 61 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 SCRT2Q9NQ03 307 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 TMEM38BQ9NVV0 291 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 IGHV3-64DA0A0J9YX35 117 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 SPAARA0A1B0GVQ0 90 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 C9JCJ5 164 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 HTR1DP28221 377 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 FAM27BQ5VT28 67 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 SLC23A3Q6PIS1 610 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 BHLHA15Q7RTS1 189 aaPredicted RBP12.48□□□□□ -0.41
PKN1-202ENST00000342216 MS4A5Q9H3V2 200 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 OR51B2Q9Y5P1 312 aa12.48□□□□□ -0.41
PKN1-202ENST00000342216 C17orf98A8MV24 154 aa12.47□□□□□ -0.41
PKN1-202ENST00000342216 SYS1-DBNDD2H3BUS1 97 aa12.47□□□□□ -0.41
PKN1-202ENST00000342216 RAB9AP51151 201 aa12.47□□□□□ -0.41
PKN1-202ENST00000342216 TREML4Q6UXN2 200 aa12.47□□□□□ -0.41
PKN1-202ENST00000342216 OR52E5Q8NH55 327 aa12.47□□□□□ -0.41
PKN1-202ENST00000342216 OR1L3Q8NH93 324 aa12.47□□□□□ -0.41
PKN1-202ENST00000342216 ZNF835Q9Y2P0 537 aa12.47□□□□□ -0.41
PKN1-202ENST00000342216 KMT2EQ8IZD2 1858 aa12.47□□□□□ -0.41
PKN1-202ENST00000342216 TRAV26-1A0A087WT03 109 aa12.47□□□□□ -0.41
PKN1-202ENST00000342216 A0A1B0GV72 72 aa12.47□□□□□ -0.41
PKN1-202ENST00000342216 MYF5P13349 255 aa12.47□□□□□ -0.41
PKN1-202ENST00000342216 HIST1H1AQ02539 215 aaPredicted RBP12.47□□□□□ -0.41
PKN1-202ENST00000342216 SCGB2A2Q13296 93 aa12.47□□□□□ -0.41
PKN1-202ENST00000342216 TIGITQ495A1 244 aa12.47□□□□□ -0.41
PKN1-202ENST00000342216 FAM120AOSQ5T036 256 aa12.47□□□□□ -0.41
PKN1-202ENST00000342216 SPATA46Q5T0L3 261 aa12.47□□□□□ -0.41
PKN1-202ENST00000342216 MKXQ8IYA7 352 aa12.47□□□□□ -0.41
PKN1-202ENST00000342216 ZNF355PQ9NSJ1 428 aa12.47□□□□□ -0.41
PKN1-202ENST00000342216 J3QR06 171 aa12.46□□□□□ -0.41
PKN1-202ENST00000342216 TNFSF15O95150 251 aa12.46□□□□□ -0.41
PKN1-202ENST00000342216 NTF4P34130 210 aa12.46□□□□□ -0.41
PKN1-202ENST00000342216 GGTLC1Q9BX51 225 aa12.46□□□□□ -0.41
PKN1-202ENST00000342216 TRAPPC2LQ9UL33 140 aa12.46□□□□□ -0.41
PKN1-202ENST00000342216 TEX48A0A1B0GUV7 120 aa12.46□□□□□ -0.42
PKN1-202ENST00000342216 IGHV3-9P01782 118 aa12.46□□□□□ -0.42
PKN1-202ENST00000342216 SRSF7Q16629 238 aaKnown RBP eCLIP12.46□□□□□ -0.42
PKN1-202ENST00000342216 NEGR1Q7Z3B1 354 aa12.46□□□□□ -0.42
PKN1-202ENST00000342216 LOC102723996A0A087X1L8 192 aa12.45□□□□□ -0.42
PKN1-202ENST00000342216 PIGBOS1A0A0B4J2F0 54 aa12.45□□□□□ -0.42
PKN1-202ENST00000342216 RHBDL1O75783 438 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms