RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 PRELID3AQ96N28 172 aa12.9□□□□□ -0.34
COL11A2-201ENST00000341947 BEX4Q9NWD9 120 aaPredicted RBP12.9□□□□□ -0.34
COL11A2-201ENST00000341947 MCM3APO60318 1980 aa12.9□□□□□ -0.34
COL11A2-201ENST00000341947 TMEM170BQ5T4T1 132 aa12.89□□□□□ -0.35
COL11A2-201ENST00000341947 FAM216BQ8N7L0 139 aa12.89□□□□□ -0.35
COL11A2-201ENST00000341947 CLEC19AQ6UXS0 136 aa12.89□□□□□ -0.35
COL11A2-201ENST00000341947 JMJD8Q96S16 334 aa12.89□□□□□ -0.35
COL11A2-201ENST00000341947 ZNF708P17019 499 aa12.89□□□□□ -0.35
COL11A2-201ENST00000341947 EGR4Q05215 589 aa12.89□□□□□ -0.35
COL11A2-201ENST00000341947 MEF2CQ06413 473 aaPredicted RBP12.89□□□□□ -0.35
COL11A2-201ENST00000341947 CD200R1LQ6Q8B3 271 aa12.89□□□□□ -0.35
COL11A2-201ENST00000341947 WDR82Q6UXN9 313 aa12.89□□□□□ -0.35
COL11A2-201ENST00000341947 PLSCR2Q9NRY7 297 aa12.89□□□□□ -0.35
COL11A2-201ENST00000341947 C12orf77C9JDV5 145 aa12.89□□□□□ -0.35
COL11A2-201ENST00000341947 NMBP08949 121 aa12.89□□□□□ -0.35
COL11A2-201ENST00000341947 VDAC2P45880 294 aaPredicted RBP12.89□□□□□ -0.35
COL11A2-201ENST00000341947 LINC01590Q5TEZ4 76 aa12.89□□□□□ -0.35
COL11A2-201ENST00000341947 PSMG3Q9BT73 122 aaPredicted RBP12.89□□□□□ -0.35
COL11A2-201ENST00000341947 PTPRZ1P23471 2315 aaPredicted RBP12.89□□□□□ -0.35
COL11A2-201ENST00000341947 DANCRP0C864 163 aa12.89□□□□□ -0.35
COL11A2-201ENST00000341947 EMP1P54849 157 aa12.89□□□□□ -0.35
COL11A2-201ENST00000341947 KIAA1644Q3SXP7 199 aa12.89□□□□□ -0.35
COL11A2-201ENST00000341947 CXorf65A6NEN9 183 aa12.88□□□□□ -0.35
COL11A2-201ENST00000341947 H3BRM9 83 aa12.88□□□□□ -0.35
COL11A2-201ENST00000341947 C2orf68Q2NKX9 166 aa12.88□□□□□ -0.35
COL11A2-201ENST00000341947 ZIC4Q8N9L1 334 aa12.88□□□□□ -0.35
COL11A2-201ENST00000341947 SIPA1L3O60292 1781 aaPredicted RBP12.88□□□□□ -0.35
COL11A2-201ENST00000341947 STRCP1A6NGW2 1772 aa12.88□□□□□ -0.35
COL11A2-201ENST00000341947 DLEC1Q9Y238 1755 aa12.88□□□□□ -0.35
COL11A2-201ENST00000341947 KBTBD11-OT1A0A1B0GTJ5 212 aa12.88□□□□□ -0.35
COL11A2-201ENST00000341947 TMEM183AQ8IXX5 376 aa12.88□□□□□ -0.35
COL11A2-201ENST00000341947 MARVELD3Q96A59 401 aa12.88□□□□□ -0.35
COL11A2-201ENST00000341947 FAM201AQ5SY85 155 aa12.88□□□□□ -0.35
COL11A2-201ENST00000341947 GGACTQ9BVM4 153 aa12.88□□□□□ -0.35
COL11A2-201ENST00000341947 SDF2L1Q9HCN8 221 aa12.88□□□□□ -0.35
COL11A2-201ENST00000341947 TMEM160Q9NX00 188 aa12.88□□□□□ -0.35
COL11A2-201ENST00000341947 ASCC3Q8N3C0 2202 aaKnown RBP12.88□□□□□ -0.35
COL11A2-201ENST00000341947 RNASE4P34096 147 aaKnown RBP12.88□□□□□ -0.35
COL11A2-201ENST00000341947 ZNF385CQ66K41 422 aaPredicted RBP12.88□□□□□ -0.35
COL11A2-201ENST00000341947 KIAA1217Q5T5P2 1943 aa12.88□□□□□ -0.35
COL11A2-201ENST00000341947 PAX1P15863 534 aa12.88□□□□□ -0.35
COL11A2-201ENST00000341947 APCDD1LQ8NCL9 501 aa12.88□□□□□ -0.35
COL11A2-201ENST00000341947 AKIRIN1Q9H9L7 192 aaPredicted RBP12.88□□□□□ -0.35
COL11A2-201ENST00000341947 MYO16Q9Y6X6 1858 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 TRGV2A0A075B6R0 118 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 OR11H12B2RN74 326 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 NBEAP1P0C6P0 100 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 SAMD13Q5VXD3 122 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 CFAP161Q6P656 301 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 BIVMQ86UB2 503 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 FAM90A1Q86YD7 464 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 PUSL1Q8N0Z8 303 aaKnown RBP12.87□□□□□ -0.35
COL11A2-201ENST00000341947 OR11H1Q8NG94 326 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 OR11H2Q8NH07 326 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 NPCDR1Q9BY65 106 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 MIA3Q5JRA6 1907 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 TMEM250H0YL14 139 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 NPFFR1Q9GZQ6 430 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 THSD7AQ9UPZ6 1657 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 NRN1LQ496H8 165 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 IGHV1-2P23083 117 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 COLCA1Q6ZS62 124 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 RNASE6Q93091 150 aaKnown RBP12.87□□□□□ -0.35
COL11A2-201ENST00000341947 GPX4P36969 197 aaPredicted RBP12.87□□□□□ -0.35
COL11A2-201ENST00000341947 FMC1Q96HJ9 113 aa12.87□□□□□ -0.35
COL11A2-201ENST00000341947 MRPL20Q9BYC9 149 aaKnown RBP12.87□□□□□ -0.35
COL11A2-201ENST00000341947 LY75O60449 1722 aa12.86□□□□□ -0.35
COL11A2-201ENST00000341947 REC114Q7Z4M0 266 aa12.86□□□□□ -0.35
COL11A2-201ENST00000341947 CDKN1AP38936 164 aa12.86□□□□□ -0.35
COL11A2-201ENST00000341947 OR13A1Q8NGR1 328 aa12.86□□□□□ -0.35
COL11A2-201ENST00000341947 LINC00312Q9Y6C7 94 aa12.86□□□□□ -0.35
COL11A2-201ENST00000341947 ZNF414Q96IQ9 312 aa12.86□□□□□ -0.35
COL11A2-201ENST00000341947 FBLIM1Q8WUP2 373 aa12.86□□□□□ -0.35
COL11A2-201ENST00000341947 RAMP1O60894 148 aa12.86□□□□□ -0.35
COL11A2-201ENST00000341947 C17orf100A8MU93 164 aa12.85□□□□□ -0.35
COL11A2-201ENST00000341947 IGFBP2P18065 325 aa12.85□□□□□ -0.35
COL11A2-201ENST00000341947 SPAG17Q6Q759 2223 aa12.85□□□□□ -0.35
COL11A2-201ENST00000341947 TDGF1P13385 188 aa12.85□□□□□ -0.35
COL11A2-201ENST00000341947 A0A0G2JMM0 328 aa12.85□□□□□ -0.35
COL11A2-201ENST00000341947 A0A1W2PPB8 328 aa12.85□□□□□ -0.35
COL11A2-201ENST00000341947 A0A1W2PRS3 328 aa12.85□□□□□ -0.35
COL11A2-201ENST00000341947 KIR3DP1A8MWS1 328 aa12.85□□□□□ -0.35
COL11A2-201ENST00000341947 STHQ8IWL8 128 aa12.85□□□□□ -0.35
COL11A2-201ENST00000341947 KNL1Q8NG31 2342 aa12.85□□□□□ -0.35
COL11A2-201ENST00000341947 MYOD1P15172 320 aa12.85□□□□□ -0.35
COL11A2-201ENST00000341947 TTC32Q5I0X7 151 aa12.85□□□□□ -0.35
COL11A2-201ENST00000341947 TM2D1Q9BX74 207 aa12.85□□□□□ -0.35
COL11A2-201ENST00000341947 CBLN4Q9NTU7 201 aa12.85□□□□□ -0.35
COL11A2-201ENST00000341947 IFITM3Q01628 133 aa12.85□□□□□ -0.35
COL11A2-201ENST00000341947 SCGB3A1Q96QR1 104 aa12.85□□□□□ -0.35
COL11A2-201ENST00000341947 C1QTNF5Q9BXJ0 243 aa12.85□□□□□ -0.35
COL11A2-201ENST00000341947 ATG2BQ96BY7 2078 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 IGHV3-11P01762 117 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 PRSS22Q9GZN4 317 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 RPRMQ9NS64 109 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 COL24A1Q17RW2 1714 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 PEX7O00628 323 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 TSPAN13O95857 204 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 SOD3P08294 240 aa12.84□□□□□ -0.35
COL11A2-201ENST00000341947 LEPP41159 167 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms