RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 TAS2R46P59540 309 aa15.38■□□□□ 0.05
SYNE2-201ENST00000341472 C15orf32Q32M92 178 aa15.38■□□□□ 0.05
SYNE2-201ENST00000341472 FAM209BQ5JX69 171 aa15.38■□□□□ 0.05
SYNE2-201ENST00000341472 AADACL3Q5VUY0 350 aa15.38■□□□□ 0.05
SYNE2-201ENST00000341472 OR4A47Q6IF82 309 aa15.38■□□□□ 0.05
SYNE2-201ENST00000341472 OR5H2Q8NGV7 314 aa15.38■□□□□ 0.05
SYNE2-201ENST00000341472 ZNF2Q9BSG1 426 aaPredicted RBP15.38■□□□□ 0.05
SYNE2-201ENST00000341472 FBXL7Q9UJT9 491 aa15.38■□□□□ 0.05
SYNE2-201ENST00000341472 ANAPC10Q9UM13 185 aa15.38■□□□□ 0.05
SYNE2-201ENST00000341472 FAM25AB3EWG3 89 aa15.37■□□□□ 0.05
SYNE2-201ENST00000341472 FAM25CB3EWG5 89 aa15.37■□□□□ 0.05
SYNE2-201ENST00000341472 FAM25GB3EWG6 89 aa15.37■□□□□ 0.05
SYNE2-201ENST00000341472 DHFRP00374 187 aa15.37■□□□□ 0.05
SYNE2-201ENST00000341472 CRYGCP07315 174 aa15.37■□□□□ 0.05
SYNE2-201ENST00000341472 CSN3P07498 182 aa15.37■□□□□ 0.05
SYNE2-201ENST00000341472 PSMB6P28072 239 aa15.37■□□□□ 0.05
SYNE2-201ENST00000341472 LYSMD2Q8IV50 215 aa15.37■□□□□ 0.05
SYNE2-201ENST00000341472 SBSPONQ8IVN8 264 aa15.37■□□□□ 0.05
SYNE2-201ENST00000341472 OR6F1Q8NGZ6 308 aa15.37■□□□□ 0.05
SYNE2-201ENST00000341472 OR51H1Q8NH63 302 aa15.37■□□□□ 0.05
SYNE2-201ENST00000341472 PLEKHA2Q9HB19 425 aa15.37■□□□□ 0.05
SYNE2-201ENST00000341472 SIGLEC8Q9NYZ4 499 aa15.37■□□□□ 0.05
SYNE2-201ENST00000341472 PEMTQ9UBM1 199 aa15.37■□□□□ 0.05
SYNE2-201ENST00000341472 A0A1B0GW64 132 aa15.36■□□□□ 0.05
SYNE2-201ENST00000341472 BMPR1BO00238 502 aa15.36■□□□□ 0.05
SYNE2-201ENST00000341472 UPK2O00526 184 aa15.36■□□□□ 0.05
SYNE2-201ENST00000341472 PGLYRP1O75594 196 aaPredicted RBP15.36■□□□□ 0.05
SYNE2-201ENST00000341472 EIF4EP06730 217 aaKnown RBP15.36■□□□□ 0.05
SYNE2-201ENST00000341472 FRMD6-AS1P0C7T7 363 aa15.36■□□□□ 0.05
SYNE2-201ENST00000341472 MYOD1P15172 320 aa15.36■□□□□ 0.05
SYNE2-201ENST00000341472 AREGP15514 252 aa15.36■□□□□ 0.05
SYNE2-201ENST00000341472 ELK1P19419 428 aa15.36■□□□□ 0.05
SYNE2-201ENST00000341472 POU2AF1Q16633 256 aa15.36■□□□□ 0.05
SYNE2-201ENST00000341472 Q8N1Y9 231 aa15.36■□□□□ 0.05
SYNE2-201ENST00000341472 MOB3AQ96BX8 217 aa15.36■□□□□ 0.05
SYNE2-201ENST00000341472 MIXL1Q9H2W2 232 aa15.36■□□□□ 0.05
SYNE2-201ENST00000341472 RABL2AQ9UBK7 228 aaPredicted RBP15.36■□□□□ 0.05
SYNE2-201ENST00000341472 RABL2BQ9UNT1 228 aa15.36■□□□□ 0.05
SYNE2-201ENST00000341472 TPPPO94811 219 aa15.35■□□□□ 0.05
SYNE2-201ENST00000341472 NDUFB8O95169 186 aa15.35■□□□□ 0.05
SYNE2-201ENST00000341472 TNFSF8P32971 234 aa15.35■□□□□ 0.05
SYNE2-201ENST00000341472 C19orf35Q6ZS72 473 aa15.35■□□□□ 0.05
SYNE2-201ENST00000341472 CMTM1Q8IZ96 169 aa15.35■□□□□ 0.05
SYNE2-201ENST00000341472 DMBX1Q8NFW5 382 aa15.35■□□□□ 0.05
SYNE2-201ENST00000341472 DIRAS2Q96HU8 199 aa15.35■□□□□ 0.05
SYNE2-201ENST00000341472 FANCD2OSQ96PS1 177 aa15.35■□□□□ 0.05
SYNE2-201ENST00000341472 TRAV3A0A0B4J244 114 aa15.34■□□□□ 0.05
SYNE2-201ENST00000341472 GGCTO75223 188 aaKnown RBP15.34■□□□□ 0.05
SYNE2-201ENST00000341472 DEFA4P12838 97 aa15.34■□□□□ 0.05
SYNE2-201ENST00000341472 HIST1H1BP16401 226 aaKnown RBP15.34■□□□□ 0.05
SYNE2-201ENST00000341472 CTRB1P17538 263 aa15.34■□□□□ 0.05
SYNE2-201ENST00000341472 HLA-DMAP28067 261 aa15.34■□□□□ 0.05
SYNE2-201ENST00000341472 OR2B8PP59922 312 aa15.34■□□□□ 0.05
SYNE2-201ENST00000341472 CTRB2Q6GPI1 263 aa15.34■□□□□ 0.05
SYNE2-201ENST00000341472 LAX1Q8IWV1 398 aa15.34■□□□□ 0.05
SYNE2-201ENST00000341472 GPX8Q8TED1 209 aa15.34■□□□□ 0.05
SYNE2-201ENST00000341472 C15orf40Q8WUR7 153 aa15.34■□□□□ 0.05
SYNE2-201ENST00000341472 COMMD5Q9GZQ3 224 aa15.34■□□□□ 0.05
SYNE2-201ENST00000341472 SCPEP1Q9HB40 452 aa15.34■□□□□ 0.05
SYNE2-201ENST00000341472 STAB2Q8WWQ8 2551 aa15.33■□□□□ 0.05
SYNE2-201ENST00000341472 S1PR2O95136 353 aa15.33■□□□□ 0.04
SYNE2-201ENST00000341472 RPA2P15927 270 aa15.33■□□□□ 0.04
SYNE2-201ENST00000341472 F2RP25116 425 aa15.33■□□□□ 0.04
SYNE2-201ENST00000341472 MECP2P51608 486 aaKnown RBP15.33■□□□□ 0.04
SYNE2-201ENST00000341472 ERVK-16P61578 105 aa15.33■□□□□ 0.04
SYNE2-201ENST00000341472 KLK9Q2XQG4 91 aa15.33■□□□□ 0.04
SYNE2-201ENST00000341472 SNX29P2Q8IUI4 249 aa15.33■□□□□ 0.04
SYNE2-201ENST00000341472 SGPP2Q8IWX5 399 aa15.33■□□□□ 0.04
SYNE2-201ENST00000341472 Q8N402 240 aa15.33■□□□□ 0.04
SYNE2-201ENST00000341472 TMEM140Q9NV12 185 aa15.33■□□□□ 0.04
SYNE2-201ENST00000341472 COMMD9Q9P000 198 aa15.33■□□□□ 0.04
SYNE2-201ENST00000341472 EXTL2Q9UBQ6 330 aa15.33■□□□□ 0.04
SYNE2-201ENST00000341472 KLK9Q9UKQ9 250 aa15.33■□□□□ 0.04
SYNE2-201ENST00000341472 DMRT1Q9Y5R6 373 aa15.33■□□□□ 0.04
SYNE2-201ENST00000341472 NBEAL2Q6ZNJ1 2754 aa15.33■□□□□ 0.04
SYNE2-201ENST00000341472 HUWE1Q7Z6Z7 4374 aaKnown RBP15.32■□□□□ 0.04
SYNE2-201ENST00000341472 CGB1A6NKQ9 187 aa15.32■□□□□ 0.04
SYNE2-201ENST00000341472 PPP5D1E7EU14 171 aa15.32■□□□□ 0.04
SYNE2-201ENST00000341472 OR2C1O95371 312 aa15.32■□□□□ 0.04
SYNE2-201ENST00000341472 IGHV3-23P01764 117 aa15.32■□□□□ 0.04
SYNE2-201ENST00000341472 REG1AP05451 166 aa15.32■□□□□ 0.04
SYNE2-201ENST00000341472 IGHV4-30-4P0DP06 118 aa15.32■□□□□ 0.04
SYNE2-201ENST00000341472 HRH1P35367 487 aa15.32■□□□□ 0.04
SYNE2-201ENST00000341472 LPAR6P43657 344 aa15.32■□□□□ 0.04
SYNE2-201ENST00000341472 TSPAN5P62079 268 aa15.32■□□□□ 0.04
SYNE2-201ENST00000341472 SPANXN2Q5MJ10 180 aa15.32■□□□□ 0.04
SYNE2-201ENST00000341472 LCN12Q6JVE5 192 aa15.32■□□□□ 0.04
SYNE2-201ENST00000341472 EEF1AKMT3Q96AZ1 226 aa15.32■□□□□ 0.04
SYNE2-201ENST00000341472 SRSF8Q9BRL6 282 aaKnown RBP15.32■□□□□ 0.04
SYNE2-201ENST00000341472 FABP12A6NFH5 140 aa15.31■□□□□ 0.04
SYNE2-201ENST00000341472 GPR31O00270 319 aa15.31■□□□□ 0.04
SYNE2-201ENST00000341472 HLA-AP01891 365 aaKnown RBP15.31■□□□□ 0.04
SYNE2-201ENST00000341472 RLN1P04808 185 aa15.31■□□□□ 0.04
SYNE2-201ENST00000341472 PTBP1P26599 531 aaKnown RBP eCLIP15.31■□□□□ 0.04
SYNE2-201ENST00000341472 LPCAT3Q6P1A2 487 aa15.31■□□□□ 0.04
SYNE2-201ENST00000341472 CLEC19AQ6UXS0 136 aa15.31■□□□□ 0.04
SYNE2-201ENST00000341472 CCDC190Q86UF4 302 aa15.31■□□□□ 0.04
SYNE2-201ENST00000341472 ZMAT4Q9H898 229 aa15.31■□□□□ 0.04
SYNE2-201ENST00000341472 A8MZ25 164 aa15.3■□□□□ 0.04
SYNE2-201ENST00000341472 FGF2P09038 288 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms