RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 BSCL2Q96G97 398 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-201ENST00000340660 ST8SIA3O43173 380 aa7.26□□□□□ -1.25
ATXN3-201ENST00000340660 ACTL6BO94805 426 aa7.26□□□□□ -1.25
ATXN3-201ENST00000340660 CDRT1O95170 752 aa7.26□□□□□ -1.25
ATXN3-201ENST00000340660 PTMSP20962 102 aa7.26□□□□□ -1.25
ATXN3-201ENST00000340660 RRM2P31350 389 aa7.26□□□□□ -1.25
ATXN3-201ENST00000340660 MPV17LQ2QL34 196 aa7.26□□□□□ -1.25
ATXN3-201ENST00000340660 SSX6Q7RTT6 188 aa7.26□□□□□ -1.25
ATXN3-201ENST00000340660 ADGRG5Q8IZF4 528 aa7.26□□□□□ -1.25
ATXN3-201ENST00000340660 C1orf158Q8N1D5 194 aa7.26□□□□□ -1.25
ATXN3-201ENST00000340660 MRPL30Q8TCC3 161 aaKnown RBP7.26□□□□□ -1.25
ATXN3-201ENST00000340660 IL1F10Q8WWZ1 152 aa7.26□□□□□ -1.25
ATXN3-201ENST00000340660 OR10C1Q96KK4 312 aa7.26□□□□□ -1.25
ATXN3-201ENST00000340660 DPH3P1Q9H4G8 78 aa7.26□□□□□ -1.25
ATXN3-201ENST00000340660 SLC45A2Q9UMX9 530 aa7.26□□□□□ -1.25
ATXN3-201ENST00000340660 TRAV14DV4A0A0A6YYC5 116 aa7.25□□□□□ -1.25
ATXN3-201ENST00000340660 IGHV3-66A0A0C4DH42 116 aa7.25□□□□□ -1.25
ATXN3-201ENST00000340660 MCRIP1C9JLW8 97 aa7.25□□□□□ -1.25
ATXN3-201ENST00000340660 H3BMM0 161 aa7.25□□□□□ -1.25
ATXN3-201ENST00000340660 M0QYG6 137 aa7.25□□□□□ -1.25
ATXN3-201ENST00000340660 M0R1X1 148 aa7.25□□□□□ -1.25
ATXN3-201ENST00000340660 ITGB1BP1O14713 200 aa7.25□□□□□ -1.25
ATXN3-201ENST00000340660 GPX5O75715 221 aa7.25□□□□□ -1.25
ATXN3-201ENST00000340660 DHFRP00374 187 aa7.25□□□□□ -1.25
ATXN3-201ENST00000340660 CD5P06127 495 aa7.25□□□□□ -1.25
ATXN3-201ENST00000340660 UBCP0CG48 685 aaKnown RBP7.25□□□□□ -1.25
ATXN3-201ENST00000340660 ACTR3P61158 418 aa7.25□□□□□ -1.25
ATXN3-201ENST00000340660 HMGN3Q15651 99 aa7.25□□□□□ -1.25
ATXN3-201ENST00000340660 RRN3P1Q2M238 152 aa7.25□□□□□ -1.25
ATXN3-201ENST00000340660 OGFRL1Q5TC84 451 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-201ENST00000340660 SPSB3Q6PJ21 355 aa7.25□□□□□ -1.25
ATXN3-201ENST00000340660 OR51A4Q8NGJ6 313 aa7.25□□□□□ -1.25
ATXN3-201ENST00000340660 DGCR14Q96DF8 476 aaKnown RBP7.25□□□□□ -1.25
ATXN3-201ENST00000340660 NSL1Q96IY1 281 aa7.25□□□□□ -1.25
ATXN3-201ENST00000340660 FAM192AQ9GZU8 254 aa7.25□□□□□ -1.25
ATXN3-201ENST00000340660 VSIRQ9H7M9 311 aa7.25□□□□□ -1.25
ATXN3-201ENST00000340660 CBY3A6NI87 242 aa7.24□□□□□ -1.25
ATXN3-201ENST00000340660 SC5DO75845 299 aa7.24□□□□□ -1.25
ATXN3-201ENST00000340660 PRM2P04554 102 aa7.24□□□□□ -1.25
ATXN3-201ENST00000340660 ZNF735P0CB33 412 aa7.24□□□□□ -1.25
ATXN3-201ENST00000340660 SAA1P0DJI8 122 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-201ENST00000340660 DEFA4P12838 97 aa7.24□□□□□ -1.25
ATXN3-201ENST00000340660 OR4B1Q8NGF8 309 aa7.24□□□□□ -1.25
ATXN3-201ENST00000340660 SCARB1Q8WTV0 552 aa7.24□□□□□ -1.25
ATXN3-201ENST00000340660 GLMPQ8WWB7 406 aa7.24□□□□□ -1.25
ATXN3-201ENST00000340660 GGHQ92820 318 aa7.24□□□□□ -1.25
ATXN3-201ENST00000340660 PPP1R14BQ96C90 147 aa7.24□□□□□ -1.25
ATXN3-201ENST00000340660 PAXXQ9BUH6 204 aa7.24□□□□□ -1.25
ATXN3-201ENST00000340660 SEPSECSQ9HD40 501 aaKnown RBP7.24□□□□□ -1.25
ATXN3-201ENST00000340660 A0A0J9YXV3 536 aa7.23□□□□□ -1.25
ATXN3-201ENST00000340660 A0A1W2PP11 408 aa7.23□□□□□ -1.25
ATXN3-201ENST00000340660 CD1AP06126 327 aa7.23□□□□□ -1.25
ATXN3-201ENST00000340660 CASQ1P31415 396 aa7.23□□□□□ -1.25
ATXN3-201ENST00000340660 OR5I1Q13606 314 aa7.23□□□□□ -1.25
ATXN3-201ENST00000340660 SIGIRRQ6IA17 410 aa7.23□□□□□ -1.25
ATXN3-201ENST00000340660 RAB12Q6IQ22 244 aa7.23□□□□□ -1.25
ATXN3-201ENST00000340660 IFT20Q8IY31 132 aa7.23□□□□□ -1.25
ATXN3-201ENST00000340660 MMD2Q8IY49 270 aa7.23□□□□□ -1.25
ATXN3-201ENST00000340660 ARHGAP24Q8N264 748 aa7.23□□□□□ -1.25
ATXN3-201ENST00000340660 ANKRD42Q8N9B4 389 aa7.23□□□□□ -1.25
ATXN3-201ENST00000340660 AQP11Q8NBQ7 271 aa7.23□□□□□ -1.25
ATXN3-201ENST00000340660 STXBP6Q8NFX7 210 aa7.23□□□□□ -1.25
ATXN3-201ENST00000340660 OR10H4Q8NGA5 316 aa7.23□□□□□ -1.25
ATXN3-201ENST00000340660 DCANP1Q8TF63 244 aa7.23□□□□□ -1.25
ATXN3-201ENST00000340660 RBPMSQ93062 196 aaKnown RBP7.23□□□□□ -1.25
ATXN3-201ENST00000340660 FAM162AQ96A26 154 aa7.23□□□□□ -1.25
ATXN3-201ENST00000340660 ISG20L2Q9H9L3 353 aaKnown RBP7.23□□□□□ -1.25
ATXN3-201ENST00000340660 CMTM6Q9NX76 183 aa7.23□□□□□ -1.25
ATXN3-201ENST00000340660 GMPPBQ9Y5P6 360 aa7.23□□□□□ -1.25
ATXN3-201ENST00000340660 A0A1W2PS18 150 aa7.22□□□□□ -1.25
ATXN3-201ENST00000340660 PSCAO43653 123 aa7.22□□□□□ -1.25
ATXN3-201ENST00000340660 M6PRP20645 277 aa7.22□□□□□ -1.25
ATXN3-201ENST00000340660 SERPINA2P20848 420 aa7.22□□□□□ -1.25
ATXN3-201ENST00000340660 ASAH1Q13510 395 aa7.22□□□□□ -1.25
ATXN3-201ENST00000340660 WFDC2Q14508 124 aa7.22□□□□□ -1.25
ATXN3-201ENST00000340660 CDK10Q15131 360 aa7.22□□□□□ -1.25
ATXN3-201ENST00000340660 PSMG4Q5JS54 123 aa7.22□□□□□ -1.25
ATXN3-201ENST00000340660 AMIGO2Q86SJ2 522 aa7.22□□□□□ -1.25
ATXN3-201ENST00000340660 SLC35F2Q8IXU6 374 aa7.22□□□□□ -1.25
ATXN3-201ENST00000340660 CADM3Q8N126 398 aa7.22□□□□□ -1.25
ATXN3-201ENST00000340660 VN1R17PQ8TDU5 208 aa7.22□□□□□ -1.25
ATXN3-201ENST00000340660 IL36GQ9NZH8 169 aa7.22□□□□□ -1.25
ATXN3-201ENST00000340660 OR1A1Q9P1Q5 309 aa7.22□□□□□ -1.25
ATXN3-201ENST00000340660 CREBL2O60519 120 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-201ENST00000340660 CA11O75493 328 aa7.21□□□□□ -1.26
ATXN3-201ENST00000340660 YIF1AO95070 293 aa7.21□□□□□ -1.26
ATXN3-201ENST00000340660 NAPSAO96009 420 aa7.21□□□□□ -1.26
ATXN3-201ENST00000340660 RPL27AP46776 148 aaKnown RBP7.21□□□□□ -1.26
ATXN3-201ENST00000340660 ZNF709Q8N972 641 aa7.21□□□□□ -1.26
ATXN3-201ENST00000340660 MNS1Q8NEH6 495 aa7.21□□□□□ -1.26
ATXN3-201ENST00000340660 OR4C16Q8NGL9 310 aa7.21□□□□□ -1.26
ATXN3-201ENST00000340660 TEX47Q8TBZ9 253 aa7.21□□□□□ -1.26
ATXN3-201ENST00000340660 GOLT1BQ9Y3E0 138 aa7.21□□□□□ -1.26
ATXN3-201ENST00000340660 A0A096LPF7 62 aa7.2□□□□□ -1.26
ATXN3-201ENST00000340660 IGHV3-21A0A0B4J1V1 117 aa7.2□□□□□ -1.26
ATXN3-201ENST00000340660 PLAC8L1A1L4L8 177 aa7.2□□□□□ -1.26
ATXN3-201ENST00000340660 ZNF701M0R085 212 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-201ENST00000340660 CRYZL1O95825 349 aa7.2□□□□□ -1.26
ATXN3-201ENST00000340660 KRT8P05787 483 aa7.2□□□□□ -1.26
ATXN3-201ENST00000340660 PSMD7P51665 324 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms