RNA–Protein interactions for RNA: ENST00000340027.9

NCR3-201, Transcript of natural cytotoxicity triggering receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCR3, Length 1,042 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCR3-201ENST00000340027 FOXA2Q9Y261 457 aaPredicted RBP11.91□□□□□ -0.5
NCR3-201ENST00000340027 LSM5Q9Y4Y9 91 aaKnown RBP11.91□□□□□ -0.5
NCR3-201ENST00000340027 DNAJC9-AS1A6NH13 148 aa11.9□□□□□ -0.5
NCR3-201ENST00000340027 FAM90A26D6RGX4 464 aa11.9□□□□□ -0.5
NCR3-201ENST00000340027 ST8SIA3O43173 380 aa11.9□□□□□ -0.5
NCR3-201ENST00000340027 CRYBA1P05813 215 aa11.9□□□□□ -0.5
NCR3-201ENST00000340027 IL6RP08887 468 aaPredicted RBP11.9□□□□□ -0.5
NCR3-201ENST00000340027 PET100P0DJ07 73 aa11.9□□□□□ -0.5
NCR3-201ENST00000340027 PVALBP20472 110 aaPredicted RBP11.9□□□□□ -0.5
NCR3-201ENST00000340027 RPL27AP46776 148 aaKnown RBP11.9□□□□□ -0.5
NCR3-201ENST00000340027 HOXA1P49639 335 aaPredicted RBP11.9□□□□□ -0.5
NCR3-201ENST00000340027 H2BFSP57053 126 aa11.9□□□□□ -0.5
NCR3-201ENST00000340027 RAP2BP61225 183 aa11.9□□□□□ -0.5
NCR3-201ENST00000340027 HSPE1P61604 102 aaKnown RBP11.9□□□□□ -0.5
NCR3-201ENST00000340027 FGL1Q08830 312 aa11.9□□□□□ -0.5
NCR3-201ENST00000340027 PJVKQ0ZLH3 352 aa11.9□□□□□ -0.5
NCR3-201ENST00000340027 FXYD3Q14802 87 aa11.9□□□□□ -0.5
NCR3-201ENST00000340027 LRRC37A5PQ49AS3 106 aa11.9□□□□□ -0.5
NCR3-201ENST00000340027 ZNF429Q86V71 674 aa11.9□□□□□ -0.5
NCR3-201ENST00000340027 OR5B3Q8NH48 314 aa11.9□□□□□ -0.5
NCR3-201ENST00000340027 CHAC2Q8WUX2 184 aa11.9□□□□□ -0.5
NCR3-201ENST00000340027 FYTTD1Q96QD9 318 aaKnown RBP11.9□□□□□ -0.5
NCR3-201ENST00000340027 NPFFR1Q9GZQ6 430 aa11.9□□□□□ -0.5
NCR3-201ENST00000340027 ZNF257Q9Y2Q1 563 aa11.9□□□□□ -0.5
NCR3-201ENST00000340027 SETXQ7Z333 2677 aaKnown RBP11.9□□□□□ -0.5
NCR3-201ENST00000340027 TEX50A0A1B0GTY4 177 aa11.89□□□□□ -0.51
NCR3-201ENST00000340027 L7N2F9 121 aa11.89□□□□□ -0.51
NCR3-201ENST00000340027 FCN1O00602 326 aa11.89□□□□□ -0.51
NCR3-201ENST00000340027 TCF21O43680 179 aa11.89□□□□□ -0.51
NCR3-201ENST00000340027 HLA-DRB1P01911 266 aa11.89□□□□□ -0.51
NCR3-201ENST00000340027 SPCS3P61009 180 aa11.89□□□□□ -0.51
NCR3-201ENST00000340027 VAMP2P63027 116 aa11.89□□□□□ -0.51
NCR3-201ENST00000340027 ZNF562Q6V9R5 426 aa11.89□□□□□ -0.51
NCR3-201ENST00000340027 OR4D5Q8NGN0 318 aa11.89□□□□□ -0.51
NCR3-201ENST00000340027 OR52E5Q8NH55 327 aa11.89□□□□□ -0.51
NCR3-201ENST00000340027 GRPEL2Q8TAA5 225 aa11.89□□□□□ -0.51
NCR3-201ENST00000340027 HIPK2Q9H2X6 1198 aa11.89□□□□□ -0.51
NCR3-201ENST00000340027 PLEKHA3Q9HB20 300 aa11.89□□□□□ -0.51
NCR3-201ENST00000340027 TMEM14BQ9NUH8 114 aa11.89□□□□□ -0.51
NCR3-201ENST00000340027 ZANQ9Y493 2812 aa11.88□□□□□ -0.51
NCR3-201ENST00000340027 A0A1W2PN81 502 aa11.88□□□□□ -0.51
NCR3-201ENST00000340027 TRIM77I1YAP6 450 aa11.88□□□□□ -0.51
NCR3-201ENST00000340027 KCNAB3O43448 404 aa11.88□□□□□ -0.51
NCR3-201ENST00000340027 CHST1O43916 411 aa11.88□□□□□ -0.51
NCR3-201ENST00000340027 GPR137BO60478 399 aa11.88□□□□□ -0.51
NCR3-201ENST00000340027 PITX3O75364 302 aa11.88□□□□□ -0.51
NCR3-201ENST00000340027 PSMB6P28072 239 aa11.88□□□□□ -0.51
NCR3-201ENST00000340027 CHRNA7P36544 502 aa11.88□□□□□ -0.51
NCR3-201ENST00000340027 COMPP49747 757 aaPredicted RBP11.88□□□□□ -0.51
NCR3-201ENST00000340027 HILS1P60008 231 aa11.88□□□□□ -0.51
NCR3-201ENST00000340027 CX3CL1P78423 397 aa11.88□□□□□ -0.51
NCR3-201ENST00000340027 TNFRSF9Q07011 255 aa11.88□□□□□ -0.51
NCR3-201ENST00000340027 SPINK9Q5DT21 86 aa11.88□□□□□ -0.51
NCR3-201ENST00000340027 CXorf66Q5JRM2 361 aaPredicted RBP11.88□□□□□ -0.51
NCR3-201ENST00000340027 THAP6Q8TBB0 222 aa11.88□□□□□ -0.51
NCR3-201ENST00000340027 SRSF12Q8WXF0 261 aaKnown RBP11.88□□□□□ -0.51
NCR3-201ENST00000340027 ARPC1AQ92747 370 aa11.88□□□□□ -0.51
NCR3-201ENST00000340027 PRSS22Q9GZN4 317 aa11.88□□□□□ -0.51
NCR3-201ENST00000340027 MAGT1Q9H0U3 335 aa11.88□□□□□ -0.51
NCR3-201ENST00000340027 RANGRFQ9HD47 186 aaPredicted RBP11.88□□□□□ -0.51
NCR3-201ENST00000340027 PARP11Q9NR21 331 aa11.88□□□□□ -0.51
NCR3-201ENST00000340027 ZNF469Q96JG9 3925 aaPredicted RBP11.88□□□□□ -0.51
NCR3-201ENST00000340027 SH2D7A6NKC9 451 aaPredicted RBP11.87□□□□□ -0.51
NCR3-201ENST00000340027 SYNGR2O43760 224 aa11.87□□□□□ -0.51
NCR3-201ENST00000340027 SSSCA1O60232 199 aa11.87□□□□□ -0.51
NCR3-201ENST00000340027 MBPP02686 304 aaPredicted RBP11.87□□□□□ -0.51
NCR3-201ENST00000340027 MYOD1P15172 320 aa11.87□□□□□ -0.51
NCR3-201ENST00000340027 POLR2GP62487 172 aaKnown RBP eCLIP11.87□□□□□ -0.51
NCR3-201ENST00000340027 ERHP84090 104 aaKnown RBP11.87□□□□□ -0.51
NCR3-201ENST00000340027 SRSF4Q08170 494 aaKnown RBP11.87□□□□□ -0.51
NCR3-201ENST00000340027 RAB32Q13637 225 aa11.87□□□□□ -0.51
NCR3-201ENST00000340027 TUSC1Q2TAM9 212 aa11.87□□□□□ -0.51
NCR3-201ENST00000340027 SLC35E3Q7Z769 313 aa11.87□□□□□ -0.51
NCR3-201ENST00000340027 OR2T35Q8NGX2 323 aa11.87□□□□□ -0.51
NCR3-201ENST00000340027 DTD1Q8TEA8 209 aa11.87□□□□□ -0.51
NCR3-201ENST00000340027 PPP1R1CQ8WVI7 109 aa11.87□□□□□ -0.51
NCR3-201ENST00000340027 CIB3Q96Q77 187 aaPredicted RBP11.87□□□□□ -0.51
NCR3-201ENST00000340027 RBKSQ9H477 322 aa11.87□□□□□ -0.51
NCR3-201ENST00000340027 HEYLQ9NQ87 328 aaPredicted RBP11.87□□□□□ -0.51
NCR3-201ENST00000340027 HSPB7Q9UBY9 170 aa11.87□□□□□ -0.51
NCR3-201ENST00000340027 RCL1Q9Y2P8 373 aaKnown RBP11.87□□□□□ -0.51
NCR3-201ENST00000340027 CSPG4Q6UVK1 2322 aa11.87□□□□□ -0.51
NCR3-201ENST00000340027 IGHV7-81A0A0B4J1V7 117 aa11.86□□□□□ -0.51
NCR3-201ENST00000340027 MSGN1A6NI15 193 aa11.86□□□□□ -0.51
NCR3-201ENST00000340027 CLDN34H7C241 214 aa11.86□□□□□ -0.51
NCR3-201ENST00000340027 K7EPK0 472 aa11.86□□□□□ -0.51
NCR3-201ENST00000340027 LY86O95711 162 aa11.86□□□□□ -0.51
NCR3-201ENST00000340027 IAPPP10997 89 aa11.86□□□□□ -0.51
NCR3-201ENST00000340027 RPL23AP62750 156 aaKnown RBP11.86□□□□□ -0.51
NCR3-201ENST00000340027 RPP30P78346 268 aaKnown RBP11.86□□□□□ -0.51
NCR3-201ENST00000340027 PRCDQ00LT1 54 aa11.86□□□□□ -0.51
NCR3-201ENST00000340027 ID3Q02535 119 aa11.86□□□□□ -0.51
NCR3-201ENST00000340027 TMEM267Q0VDI3 215 aaPredicted RBP11.86□□□□□ -0.51
NCR3-201ENST00000340027 C10orf55Q5SWW7 151 aa11.86□□□□□ -0.51
NCR3-201ENST00000340027 ACANP16112 2415 aa11.86□□□□□ -0.51
NCR3-201ENST00000340027 HIVEP2P31629 2446 aa11.85□□□□□ -0.51
NCR3-201ENST00000340027 MPC2O95563 127 aa11.85□□□□□ -0.51
NCR3-201ENST00000340027 RNASE1P07998 156 aaKnown RBP11.85□□□□□ -0.51
NCR3-201ENST00000340027 NUP62P37198 522 aaPredicted RBP11.85□□□□□ -0.51
NCR3-201ENST00000340027 SNCAP37840 140 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms