RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 RAB9BQ9NP90 201 aa6□□□□□ -1.45
SRFBP1-201ENST00000339397 IGHV2-26A0A0B4J1V2 119 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 NDUFA2O43678 99 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 IL6RP08887 468 aaPredicted RBP5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 OR13C7P0DN81 318 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 CD24P25063 80 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 DVL1P1P54792 670 aaPredicted RBP5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 FBLN7Q53RD9 439 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 PNKDQ8N490 385 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 HARBI1Q96MB7 349 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 ONECUT1Q9UBC0 465 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 OR51B2Q9Y5P1 312 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 ZNF469Q96JG9 3925 aaPredicted RBP5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 TEX50A0A1B0GTY4 177 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 A0A1B0GW64 132 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 SMCO3A2RU48 225 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 TRIM77I1YAP6 450 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 ENSAO43768 121 aaKnown RBP5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 IGHV3-48P01763 117 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 ARG1P05089 322 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 FGF7P21781 194 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 ZFP36P26651 326 aaKnown RBP5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 HOXA1P49639 335 aaPredicted RBP5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 RAB5CP51148 216 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 CEBPGP53567 150 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 HSPE1P61604 102 aaKnown RBP5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 KLRD1Q13241 179 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 OR9G1Q8NH87 305 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 RCC1LQ96I51 464 aaKnown RBP5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 C20orf24Q9BUV8 137 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 TMPRSS5Q9H3S3 457 aa5.99□□□□□ -1.45
SRFBP1-201ENST00000339397 UMAD1C9J7I0 102 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 PRSS46E5RG02 174 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 DNASE2O00115 360 aaPredicted RBP5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 UPK2O00526 184 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 TSPAN4O14817 238 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 CA2P00918 260 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 IGLV1-47P01700 117 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 IFNA4P05014 189 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 KIR2DS2P43631 304 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 RTL8BQ17RB0 113 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 C10orf91Q5T1B1 145 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 C19orf35Q6ZS72 473 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 DTX2Q86UW9 622 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 ZNF429Q86V71 674 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 CBLN2Q8IUK8 224 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 LHX4Q969G2 390 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 UBR5O95071 2799 aaPredicted RBP5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 SLC25A17O43808 307 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 HRASP01112 189 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 IGLV2-23P01705 113 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 CD1BP29016 333 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 LGALS4P56470 323 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 GNB2P62879 340 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 ARSJQ5FYB0 599 aaPredicted RBP5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 TGIF2LXQ8IUE1 241 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 OR10A7Q8NGE5 316 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 FLYWCH2Q96CP2 140 aaKnown RBP5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 ADTRPQ96IZ2 230 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 CIB3Q96Q77 187 aaPredicted RBP5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 NPCDR1Q9BY65 106 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 NKX6-2Q9C056 277 aaPredicted RBP5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 HIPK2Q9H2X6 1198 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 SLC25A22Q9H936 323 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 FOXA2Q9Y261 457 aaPredicted RBP5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 BAHCC1Q9P281 2608 aa5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.98□□□□□ -1.45
SRFBP1-201ENST00000339397 A0A087X0M5 115 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 A0A1B0GX30 115 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 CGB1A6NKQ9 187 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 MDKP21741 143 aaPredicted RBP5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 POU2AF1Q16633 256 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 MRGPRG-AS1Q2M3A8 158 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 TREML4Q6UXN2 200 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 LHFPL4Q7Z7J7 247 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 OR8B3Q8NGG8 313 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 OR4P4Q8NGL7 312 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 OR52E5Q8NH55 327 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 ZNF596Q8TC21 504 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 RXFP4Q8TDU9 374 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 FAM216AQ8WUB2 273 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 GATAD1Q8WUU5 269 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 OR8B2Q96RD0 313 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 TMEM147Q9BVK8 224 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 SEC11CQ9BY50 192 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 RBFOX3A6NFN3 312 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 ZFP92A6NM28 416 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 FAM90A9PA6NNJ1 464 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 KBTBD11O94819 623 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 REG1AP05451 166 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 OR8U8P0C7N1 319 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 IGFBP2P18065 325 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 HLA-DRB5Q30154 266 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 PDLIM3Q53GG5 364 aaPredicted RBP5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 RUSC1-AS1Q66K80 236 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 SSMEM1Q8WWF3 244 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 TMEM186Q96B77 213 aa5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 PINX1Q96BK5 328 aaKnown RBP5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 NEIL1Q96FI4 390 aaPredicted RBP5.97□□□□□ -1.45
SRFBP1-201ENST00000339397 CLCC1Q96S66 551 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms