RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 UBALD1Q8TB05 177 aa10.58□□□□□ -0.72
DFFB-202ENST00000339350 TSSC4Q9Y5U2 329 aaPredicted RBP10.58□□□□□ -0.72
DFFB-202ENST00000339350 IGHV5-10-1A0A0J9YXX1 117 aa10.58□□□□□ -0.72
DFFB-202ENST00000339350 ZNF324O75467 553 aaPredicted RBP10.58□□□□□ -0.72
DFFB-202ENST00000339350 CCL4P13236 92 aa10.58□□□□□ -0.72
DFFB-202ENST00000339350 RPL32P62910 135 aaKnown RBP10.58□□□□□ -0.72
DFFB-202ENST00000339350 PMCHL1Q16048 86 aa10.58□□□□□ -0.72
DFFB-202ENST00000339350 FER1L6-AS2Q96M78 137 aa10.58□□□□□ -0.72
DFFB-202ENST00000339350 TAAR3PQ9P1P4 343 aa10.58□□□□□ -0.72
DFFB-202ENST00000339350 UFC1Q9Y3C8 167 aa10.58□□□□□ -0.72
DFFB-202ENST00000339350 SVILO95425 2214 aa10.58□□□□□ -0.72
DFFB-202ENST00000339350 LY6G6EA0A0G2JKS1 128 aa10.58□□□□□ -0.72
DFFB-202ENST00000339350 C17orf112F2Z3M2 114 aa10.58□□□□□ -0.72
DFFB-202ENST00000339350 J3QR06 171 aa10.58□□□□□ -0.72
DFFB-202ENST00000339350 CRYGSP22914 178 aa10.58□□□□□ -0.72
DFFB-202ENST00000339350 TGFBR3Q03167 851 aa10.58□□□□□ -0.72
DFFB-202ENST00000339350 MEF2CQ06413 473 aaPredicted RBP10.58□□□□□ -0.72
DFFB-202ENST00000339350 C19orf24Q9BVV8 132 aa10.58□□□□□ -0.72
DFFB-202ENST00000339350 PROK2Q9HC23 129 aa10.58□□□□□ -0.72
DFFB-202ENST00000339350 CCL28Q9NRJ3 127 aa10.58□□□□□ -0.72
DFFB-202ENST00000339350 SLC39A9Q9NUM3 307 aa10.58□□□□□ -0.72
DFFB-202ENST00000339350 U3KQA8 63 aa10.58□□□□□ -0.72
DFFB-202ENST00000339350 TEX48A0A1B0GUV7 120 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 GAGE12HA6NDE8 117 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 SNURFLB1AK76 121 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 SNAI2O43623 268 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 CHST1O43916 411 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 PDCD6O75340 191 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 CLDN1O95832 211 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 CEACAM16Q2WEN9 425 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 SLC25A40Q8TBP6 338 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 CT55Q8WUE5 264 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 PTRH2Q9Y3E5 179 aaKnown RBP10.57□□□□□ -0.72
DFFB-202ENST00000339350 CXCL13O43927 109 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 DKK1O94907 266 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 SERPINE2P07093 398 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 FAM87AP0C7U9 286 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 BCL3P20749 454 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 ZNF90Q03938 601 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 DAZAP2Q15038 168 aaPredicted RBP10.57□□□□□ -0.72
DFFB-202ENST00000339350 FAM27BQ5VT28 67 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 ZNF114Q8NC26 417 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 OR51H1Q8NH63 302 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 SCGB1C1Q8TD33 95 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 JMJD8Q96S16 334 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 WDR61Q9GZS3 305 aaKnown RBP10.57□□□□□ -0.72
DFFB-202ENST00000339350 RAB1BQ9H0U4 201 aa10.57□□□□□ -0.72
DFFB-202ENST00000339350 A0A096LPE4 126 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 A0A1W2PPV4 95 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 A0A1W2PPZ6 126 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 AGFG2O95081 481 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 LIFP15018 202 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 NPPCP23582 126 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 RBM11P57052 281 aaKnown RBP10.56□□□□□ -0.72
DFFB-202ENST00000339350 PCOLCEQ15113 449 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 C12orf54Q6X4T0 127 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 LRTM2Q8N967 370 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 PERPQ96FX8 193 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 NPFFR1Q9GZQ6 430 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 TMEM222Q9H0R3 208 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 A0A087X0K7 114 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 H0YJW9 148 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 MLNRO43193 412 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 LAMTOR5O43504 91 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 VENTXO95231 258 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 THBS3P49746 956 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 COX19Q49B96 90 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 ZNF488Q96MN9 340 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 JPT1Q9UK76 154 aa10.56□□□□□ -0.72
DFFB-202ENST00000339350 A0A0G2JRQ6 117 aa10.55□□□□□ -0.72
DFFB-202ENST00000339350 M0QXV9 152 aa10.55□□□□□ -0.72
DFFB-202ENST00000339350 C19orf25Q9UFG5 118 aaPredicted RBP10.55□□□□□ -0.72
DFFB-202ENST00000339350 PTPRZ1P23471 2315 aaPredicted RBP10.55□□□□□ -0.72
DFFB-202ENST00000339350 RFPL3SP0C7P2 107 aa10.55□□□□□ -0.72
DFFB-202ENST00000339350 GPM6AP51674 278 aa10.55□□□□□ -0.72
DFFB-202ENST00000339350 AAED1Q7RTV5 226 aa10.55□□□□□ -0.72
DFFB-202ENST00000339350 AP1S3Q96PC3 154 aa10.55□□□□□ -0.72
DFFB-202ENST00000339350 PSMG3Q9BT73 122 aaPredicted RBP10.55□□□□□ -0.72
DFFB-202ENST00000339350 LINC00470Q9BZP3 86 aa10.55□□□□□ -0.72
DFFB-202ENST00000339350 SLC25A22Q9H936 323 aa10.55□□□□□ -0.72
DFFB-202ENST00000339350 ZFHX2Q9C0A1 2572 aaPredicted RBP10.55□□□□□ -0.72
DFFB-202ENST00000339350 IGHV3-64DA0A0J9YX35 117 aa10.55□□□□□ -0.72
DFFB-202ENST00000339350 LOC102725191A0A1B0GVB3 256 aa10.55□□□□□ -0.72
DFFB-202ENST00000339350 B5MCH6 92 aa10.55□□□□□ -0.72
DFFB-202ENST00000339350 SIRPB1O00241 398 aa10.55□□□□□ -0.72
DFFB-202ENST00000339350 PAGE4O60829 102 aa10.55□□□□□ -0.72
DFFB-202ENST00000339350 SSBP2P81877 361 aaPredicted RBP10.55□□□□□ -0.72
DFFB-202ENST00000339350 PRR31Q5SQ13 230 aa10.55□□□□□ -0.72
DFFB-202ENST00000339350 STPG3Q8N7X2 389 aa10.55□□□□□ -0.72
DFFB-202ENST00000339350 SAP25Q8TEE9 199 aa10.55□□□□□ -0.72
DFFB-202ENST00000339350 RNF183Q96D59 192 aa10.55□□□□□ -0.72
DFFB-202ENST00000339350 FOXB1Q99853 325 aa10.55□□□□□ -0.72
DFFB-202ENST00000339350 DOCK10Q96BY6 2186 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 SPINK4O60575 86 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 CRYAAP02489 173 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 IAPPP10997 89 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 NPY1RP25929 384 aa10.54□□□□□ -0.72
DFFB-202ENST00000339350 DSCR4P56555 118 aaPredicted RBP10.54□□□□□ -0.72
DFFB-202ENST00000339350 CD300EQ496F6 205 aaPredicted RBP10.54□□□□□ -0.72
DFFB-202ENST00000339350 WIPI1Q5MNZ9 446 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms