RNA–Protein interactions for RNA: ENST00000338581.10

OTOF-202, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-202ENST00000338581 RBMY1EA6NEQ0 496 aaKnown RBP12.12□□□□□ -0.47
OTOF-202ENST00000338581 RBMY1DP0C7P1 496 aaKnown RBP12.12□□□□□ -0.47
OTOF-202ENST00000338581 RBMY1A1P0DJD3 496 aaKnown RBP12.12□□□□□ -0.47
OTOF-202ENST00000338581 RBMY1CP0DJD4 496 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 ADMP35318 185 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 GAGE13Q4V321 117 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 TM2D1Q9BX74 207 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 SLC25A2Q9BXI2 301 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 TTTY12Q9BZ98 90 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 TRAV8-4A0A0B4J246 113 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 F8VVB4 439 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 F8VWA3 439 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 TBX6O95947 436 aaPredicted RBP12.12□□□□□ -0.47
OTOF-202ENST00000338581 CCL4P13236 92 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 ASIPP42127 132 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 ZFAND6Q6FIF0 208 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 SPRED2Q7Z698 418 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 HIST3H2BBQ8N257 126 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 RPP25Q9BUL9 199 aaKnown RBP12.12□□□□□ -0.47
OTOF-202ENST00000338581 TRBV24-1A0A075B6N3 115 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 HIGD1CA8MV81 97 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 NPIPB11E5RHQ5 1161 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 CEACAM4O75871 244 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 OSTCQ9NRP0 149 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 TMEM242Q9NWH2 141 aa12.12□□□□□ -0.47
OTOF-202ENST00000338581 SEC16AO15027 2179 aa12.11□□□□□ -0.47
OTOF-202ENST00000338581 HOXA3O43365 443 aaPredicted RBP12.11□□□□□ -0.47
OTOF-202ENST00000338581 IGHMP01871 453 aa12.11□□□□□ -0.47
OTOF-202ENST00000338581 DCAF10Q5QP82 559 aa12.11□□□□□ -0.47
OTOF-202ENST00000338581 ZNF525Q8N782 197 aa12.11□□□□□ -0.47
OTOF-202ENST00000338581 MS4A6AQ9H2W1 248 aa12.11□□□□□ -0.47
OTOF-202ENST00000338581 CTSSP25774 331 aa12.11□□□□□ -0.47
OTOF-202ENST00000338581 C1QL4Q86Z23 238 aa12.11□□□□□ -0.47
OTOF-202ENST00000338581 TMEM101Q96IK0 257 aa12.11□□□□□ -0.47
OTOF-202ENST00000338581 TNFRSF18Q9Y5U5 241 aa12.11□□□□□ -0.47
OTOF-202ENST00000338581 APC2O95996 2303 aa12.11□□□□□ -0.47
OTOF-202ENST00000338581 PSMB11A5LHX3 300 aa12.11□□□□□ -0.47
OTOF-202ENST00000338581 J3QW42 95 aa12.11□□□□□ -0.47
OTOF-202ENST00000338581 HBDP02042 147 aa12.11□□□□□ -0.47
OTOF-202ENST00000338581 VKORC1L1Q8N0U8 176 aa12.11□□□□□ -0.47
OTOF-202ENST00000338581 RTBDNQ9BSG5 229 aaPredicted RBP12.11□□□□□ -0.47
OTOF-202ENST00000338581 PGPEP1Q9NXJ5 209 aa12.11□□□□□ -0.47
OTOF-202ENST00000338581 FOXD3Q9UJU5 478 aaPredicted RBP12.11□□□□□ -0.47
OTOF-202ENST00000338581 SMCHD1A6NHR9 2005 aa12.11□□□□□ -0.47
OTOF-202ENST00000338581 MOSP00540 346 aa12.11□□□□□ -0.47
OTOF-202ENST00000338581 CHODLQ9H9P2 273 aa12.11□□□□□ -0.47
OTOF-202ENST00000338581 FAM181BA6NEQ2 426 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 M0R381 172 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 DPM2O94777 84 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 TFF3Q07654 80 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 FER1L6-AS1Q8NA97 138 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 APOBEC4Q8WW27 367 aaKnown RBP12.1□□□□□ -0.47
OTOF-202ENST00000338581 GNB1LQ9BYB4 327 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 DDX60LQ5H9U9 1706 aaKnown RBP12.1□□□□□ -0.47
OTOF-202ENST00000338581 KLF4O43474 513 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 NDUFA3O95167 84 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 CNTFRP26992 372 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 PAX2Q02962 417 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 SAMD5Q5TGI4 173 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 TEX45Q8NA69 505 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 OR9G4Q8NGQ1 327 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 OSR1Q8TAX0 266 aaPredicted RBP12.1□□□□□ -0.47
OTOF-202ENST00000338581 CACNG8Q8WXS5 425 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 DMRTA2Q96SC8 542 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 ATP5G2Q06055 141 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 C1orf194Q5T5A4 169 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 MRPL52Q86TS9 123 aaKnown RBP12.1□□□□□ -0.47
OTOF-202ENST00000338581 OR52E5Q8NH55 327 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 LAMB1P07942 1786 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 IGKV1-8A0A0C4DH67 115 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 REG1AP05451 166 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 GDF15Q99988 308 aa12.1□□□□□ -0.47
OTOF-202ENST00000338581 IGHV5-10-1A0A0J9YXX1 117 aa12.09□□□□□ -0.47
OTOF-202ENST00000338581 SNRPD3P62318 126 aaKnown RBP12.09□□□□□ -0.47
OTOF-202ENST00000338581 TIMP4Q99727 224 aa12.09□□□□□ -0.47
OTOF-202ENST00000338581 FAM186AA6NE01 2351 aa12.09□□□□□ -0.47
OTOF-202ENST00000338581 IGKV1D-42A0A075B6H8 117 aa12.09□□□□□ -0.47
OTOF-202ENST00000338581 COLCA2A8K830 154 aa12.09□□□□□ -0.47
OTOF-202ENST00000338581 IGFBP2P18065 325 aa12.09□□□□□ -0.47
OTOF-202ENST00000338581 EEF1AKMT3Q96AZ1 226 aa12.09□□□□□ -0.47
OTOF-202ENST00000338581 CHCHD1Q96BP2 118 aaKnown RBP12.09□□□□□ -0.47
OTOF-202ENST00000338581 SPSB2Q99619 263 aa12.09□□□□□ -0.47
OTOF-202ENST00000338581 RNF126Q9BV68 326 aa12.09□□□□□ -0.47
OTOF-202ENST00000338581 PILRAQ9UKJ1 303 aa12.09□□□□□ -0.47
OTOF-202ENST00000338581 TSPAN7P41732 249 aa12.09□□□□□ -0.47
OTOF-202ENST00000338581 FOXC1Q12948 553 aa12.09□□□□□ -0.47
OTOF-202ENST00000338581 YAE1D1Q9NRH1 226 aa12.09□□□□□ -0.47
OTOF-202ENST00000338581 IGHV3OR16-12A0A075B7B8 117 aa12.09□□□□□ -0.47
OTOF-202ENST00000338581 IGKV3OR2-268A0A0C4DH90 116 aa12.09□□□□□ -0.47
OTOF-202ENST00000338581 SPINT1O43278 529 aa12.09□□□□□ -0.47
OTOF-202ENST00000338581 LEPP41159 167 aa12.09□□□□□ -0.47
OTOF-202ENST00000338581 SRSF6Q13247 344 aaKnown RBP12.09□□□□□ -0.47
OTOF-202ENST00000338581 RREB1Q92766 1687 aa12.09□□□□□ -0.47
OTOF-202ENST00000338581 AMBPP02760 352 aa12.08□□□□□ -0.48
OTOF-202ENST00000338581 PPBPP02775 128 aa12.08□□□□□ -0.48
OTOF-202ENST00000338581 PLPPR1Q8TBJ4 325 aa12.08□□□□□ -0.48
OTOF-202ENST00000338581 NXT2Q9NPJ8 142 aaKnown RBP12.08□□□□□ -0.48
OTOF-202ENST00000338581 FTH1P19P0C7X4 201 aa12.08□□□□□ -0.48
OTOF-202ENST00000338581 STARD6P59095 220 aa12.08□□□□□ -0.48
OTOF-202ENST00000338581 PRSS53Q2L4Q9 553 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms