RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 GABRA2P47869 451 aa11.57□□□□□ -0.56
SF1-202ENST00000334944 EDDM3AQ14507 147 aa11.57□□□□□ -0.56
SF1-202ENST00000334944 C1orf185Q5T7R7 199 aa11.57□□□□□ -0.56
SF1-202ENST00000334944 S100A7AQ86SG5 101 aa11.57□□□□□ -0.56
SF1-202ENST00000334944 HAPLN4Q86UW8 402 aa11.57□□□□□ -0.56
SF1-202ENST00000334944 DRAM1Q8N682 238 aa11.57□□□□□ -0.56
SF1-202ENST00000334944 ZNF738Q8NE65 137 aa11.57□□□□□ -0.56
SF1-202ENST00000334944 OR4C12Q96R67 309 aa11.57□□□□□ -0.56
SF1-202ENST00000334944 RELNP78509 3460 aa11.57□□□□□ -0.56
SF1-202ENST00000334944 KRASP01116 189 aa11.57□□□□□ -0.56
SF1-202ENST00000334944 SSTR5P35346 364 aa11.57□□□□□ -0.56
SF1-202ENST00000334944 BAXQ07812 192 aa11.57□□□□□ -0.56
SF1-202ENST00000334944 ZNF816Q0VGE8 651 aaPredicted RBP11.57□□□□□ -0.56
SF1-202ENST00000334944 ZNF585BQ52M93 769 aa11.57□□□□□ -0.56
SF1-202ENST00000334944 SPINK9Q5DT21 86 aa11.57□□□□□ -0.56
SF1-202ENST00000334944 SPANXN5Q5MJ07 72 aa11.57□□□□□ -0.56
SF1-202ENST00000334944 YLPM1P49750 1951 aaKnown RBP11.57□□□□□ -0.56
SF1-202ENST00000334944 TMEM238C9JI98 176 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 TYMSP04818 313 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 RAC2P15153 192 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 S100GP29377 79 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 LCN12Q6JVE5 192 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 SMIM15Q7Z3B0 74 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 PIP4P1Q86T03 277 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 MRPL52Q86TS9 123 aaKnown RBP11.56□□□□□ -0.56
SF1-202ENST00000334944 WFDC8Q8IUA0 241 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 OR2D2Q9H210 308 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 NBASA2RRP1 2371 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 F6UZH7 168 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 IGLC2P0DOY2 106 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 IGLC3P0DOY3 106 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 PSG1P11464 419 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 COL8A2P25067 703 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 SRSF7Q16629 238 aaKnown RBP eCLIP11.56□□□□□ -0.566e-7■□□□□ 8.9
SF1-202ENST00000334944 CENPVQ7Z7K6 275 aaPredicted RBP11.56□□□□□ -0.56
SF1-202ENST00000334944 LINC00596Q86U02 117 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 C11orf53Q8IXP5 236 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 ANAPC16Q96DE5 110 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 ODAMA1E959 279 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 C12orf77C9JDV5 145 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 SRP14P37108 136 aaKnown RBP11.56□□□□□ -0.56
SF1-202ENST00000334944 ZNF525Q8N782 197 aa11.56□□□□□ -0.56
SF1-202ENST00000334944 RBFOX2O43251 390 aaKnown RBP eCLIP11.55□□□□□ -0.569e-11■■■■■ 27.3
SF1-202ENST00000334944 GOSR1O95249 250 aa11.55□□□□□ -0.56
SF1-202ENST00000334944 SPRNQ5BIV9 151 aa11.55□□□□□ -0.56
SF1-202ENST00000334944 ACSM6Q6P461 480 aa11.55□□□□□ -0.56
SF1-202ENST00000334944 FAM19A2Q8N3H0 131 aa11.55□□□□□ -0.56
SF1-202ENST00000334944 SIGLECL1Q8N7X8 197 aa11.55□□□□□ -0.56
SF1-202ENST00000334944 ST6GALNAC6Q969X2 333 aa11.55□□□□□ -0.56
SF1-202ENST00000334944 GSX1Q9H4S2 264 aaPredicted RBP11.55□□□□□ -0.56
SF1-202ENST00000334944 SLC45A2Q9UMX9 530 aa11.55□□□□□ -0.56
SF1-202ENST00000334944 KIAA1324LA8MWY0 1029 aaPredicted RBP11.55□□□□□ -0.56
SF1-202ENST00000334944 IQCF6A8MYZ5 107 aa11.55□□□□□ -0.56
SF1-202ENST00000334944 SLC17A3O00476 420 aa11.55□□□□□ -0.56
SF1-202ENST00000334944 IGHG3P01860 377 aa11.55□□□□□ -0.56
SF1-202ENST00000334944 G6PCP35575 357 aa11.55□□□□□ -0.56
SF1-202ENST00000334944 RPL30P62888 115 aaKnown RBP11.55□□□□□ -0.56
SF1-202ENST00000334944 Q8N976 141 aa11.55□□□□□ -0.56
SF1-202ENST00000334944 NUDT11Q96G61 164 aa11.55□□□□□ -0.56
SF1-202ENST00000334944 C5orf30Q96GV9 206 aa11.55□□□□□ -0.56
SF1-202ENST00000334944 ABHD14BQ96IU4 210 aa11.55□□□□□ -0.56
SF1-202ENST00000334944 UQCR10Q9UDW1 63 aa11.55□□□□□ -0.56
SF1-202ENST00000334944 TBL2Q9Y4P3 447 aaKnown RBP11.55□□□□□ -0.56
SF1-202ENST00000334944 SPTA1P02549 2419 aa11.55□□□□□ -0.56
SF1-202ENST00000334944 TRBV6-6A0A0A6YYG2 114 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 NDUFB4O95168 129 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 ZNF83P51522 516 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 MSMPQ1L6U9 139 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 INO80CQ6PI98 192 aaPredicted RBP11.54□□□□□ -0.56
SF1-202ENST00000334944 OR2Z1Q8NG97 314 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 AGMATQ9BSE5 352 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 ELOVL5Q9NYP7 299 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 IGHV3OR15-7A0A075B7D8 119 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 TRAV17A0A0B4J275 112 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 IGHV2OR16-5A0A0B4J2B6 119 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 K7EM74 188 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 AMTP48728 403 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 SLC35B1P78383 322 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 ZNF146Q15072 292 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 Q5PR19 223 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 LINC01551Q86U37 167 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 C1orf174Q8IYL3 243 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 ZNF596Q8TC21 504 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 COQ2Q96H96 371 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 MRPL18Q9H0U6 180 aaKnown RBP11.54□□□□□ -0.56
SF1-202ENST00000334944 FAM234AQ9H0X4 552 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 HIPK2Q9H2X6 1198 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 PSENENQ9NZ42 101 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 DKK4Q9UBT3 224 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 ZGRF1Q86YA3 2104 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.54□□□□□ -0.56
SF1-202ENST00000334944 HBZP02008 142 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 CTRLP40313 264 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 IER3P46695 156 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 ATP5G3P48201 142 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 ACSF3Q4G176 576 aaPredicted RBP11.54□□□□□ -0.56
SF1-202ENST00000334944 C16orf54Q6UWD8 224 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 WDR82Q6UXN9 313 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 CST9LQ9H4G1 147 aa11.54□□□□□ -0.56
SF1-202ENST00000334944 SYNGR2O43760 224 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms