RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 DLL1O00548 723 aa12.16□□□□□ -0.46
CLCNKA-201ENST00000331433 YIF1AO95070 293 aa12.16□□□□□ -0.46
CLCNKA-201ENST00000331433 HSPE1P61604 102 aaKnown RBP12.16□□□□□ -0.46
CLCNKA-201ENST00000331433 MIC13Q5XKP0 118 aa12.16□□□□□ -0.46
CLCNKA-201ENST00000331433 PPIAL4EA0A075B759 164 aa12.16□□□□□ -0.46
CLCNKA-201ENST00000331433 PPIAL4DF5H284 164 aa12.16□□□□□ -0.46
CLCNKA-201ENST00000331433 TMEM178BH3BS89 294 aa12.16□□□□□ -0.46
CLCNKA-201ENST00000331433 IGHV2-5P01817 119 aa12.16□□□□□ -0.46
CLCNKA-201ENST00000331433 PPIAL4FP0DN26 164 aa12.16□□□□□ -0.46
CLCNKA-201ENST00000331433 ADIRFQ15847 76 aa12.16□□□□□ -0.46
CLCNKA-201ENST00000331433 C1QL4Q86Z23 238 aa12.16□□□□□ -0.46
CLCNKA-201ENST00000331433 SLC24A4Q8NFF2 622 aa12.16□□□□□ -0.46
CLCNKA-201ENST00000331433 OR13D1Q8NGV5 346 aa12.16□□□□□ -0.46
CLCNKA-201ENST00000331433 C1orf159Q96HA4 380 aa12.16□□□□□ -0.46
CLCNKA-201ENST00000331433 MANBALQ9NQG1 85 aa12.16□□□□□ -0.46
CLCNKA-201ENST00000331433 SLC35D1Q9NTN3 355 aa12.16□□□□□ -0.46
CLCNKA-201ENST00000331433 PPIAL4AQ9Y536 164 aa12.16□□□□□ -0.46
CLCNKA-201ENST00000331433 OR51B2Q9Y5P1 312 aa12.16□□□□□ -0.46
CLCNKA-201ENST00000331433 KBTBD11O94819 623 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 HRASP01112 189 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 NPY1RP25929 384 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 TMPRSS3P57727 454 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 ARSJQ5FYB0 599 aaPredicted RBP12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 LYPD2Q6UXB3 125 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 SSMEM1Q8WWF3 244 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 GGACTQ9BVM4 153 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 GGTLC1Q9BX51 225 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 PARLQ9H300 379 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 SEC14L6B5MCN3 397 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 TMEM250H0YL14 139 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 MPDU1O75352 247 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 CA2P00918 260 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 OPRK1P41145 380 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 MEOX2P50222 304 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 TMEM200BQ69YZ2 307 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 CYP2G1PQ6ZSU1 146 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 H1FXQ92522 213 aaKnown RBP12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 GAL3ST2Q9H3Q3 398 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 ENY2Q9NPA8 101 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 NAT8Q9UHE5 227 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 PXMP4Q9Y6I8 212 aa12.15□□□□□ -0.46
CLCNKA-201ENST00000331433 A0A1W2PPV4 95 aa12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 SHISA9B4DS77 424 aa12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 CLDN34H7C241 214 aa12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 UBE2G2P60604 165 aa12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 TMEM241Q24JQ0 296 aa12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 DMRTC2Q8IXT2 367 aaPredicted RBP12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 C1orf87Q8N0U7 546 aa12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 RNASE6Q93091 150 aaKnown RBP12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 ZNF714Q96N38 554 aa12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 MRPL20Q9BYC9 149 aaKnown RBP12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 TMEM106BQ9NUM4 274 aa12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 METTL1Q9UBP6 276 aaKnown RBP12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 C11orf94C9JXX5 98 aa12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 E7EQL1 145 aa12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 COL8A2P25067 703 aa12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 REG1BP48304 166 aa12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 KIAA0141Q14154 515 aaPredicted RBP12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 POU2AF1Q16633 256 aa12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 RTL8BQ17RB0 113 aa12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 DYNLRB1Q9NP97 96 aa12.14□□□□□ -0.47
CLCNKA-201ENST00000331433 ZZEF1O43149 2961 aa12.13□□□□□ -0.47
CLCNKA-201ENST00000331433 AP4M1O00189 453 aa12.13□□□□□ -0.47
CLCNKA-201ENST00000331433 MEF2CQ06413 473 aaPredicted RBP12.13□□□□□ -0.47
CLCNKA-201ENST00000331433 TMEM30BQ3MIR4 351 aa12.13□□□□□ -0.47
CLCNKA-201ENST00000331433 OR51G1Q8NGK1 321 aa12.13□□□□□ -0.47
CLCNKA-201ENST00000331433 NPVFQ9HCQ7 196 aa12.13□□□□□ -0.47
CLCNKA-201ENST00000331433 TMEM242Q9NWH2 141 aa12.13□□□□□ -0.47
CLCNKA-201ENST00000331433 LSM4Q9Y4Z0 139 aaKnown RBP12.13□□□□□ -0.47
CLCNKA-201ENST00000331433 J3QR06 171 aa12.13□□□□□ -0.47
CLCNKA-201ENST00000331433 UPK2O00526 184 aa12.13□□□□□ -0.47
CLCNKA-201ENST00000331433 RND2P52198 227 aa12.13□□□□□ -0.47
CLCNKA-201ENST00000331433 RPL23P62829 140 aaKnown RBP12.13□□□□□ -0.47
CLCNKA-201ENST00000331433 FAM122AQ96E09 287 aa12.13□□□□□ -0.47
CLCNKA-201ENST00000331433 CTSZQ9UBR2 303 aa12.13□□□□□ -0.47
CLCNKA-201ENST00000331433 PRNDQ9UKY0 176 aa12.13□□□□□ -0.47
CLCNKA-201ENST00000331433 PIEZO1Q92508 2521 aa12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 IL6RP08887 468 aaPredicted RBP12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 SAA1P0DJI8 122 aaPredicted RBP12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 NPPCP23582 126 aa12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 ATP5G3P48201 142 aa12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 NCMAPQ5T1S8 102 aa12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 ZNF833PQ6ZTB9 187 aa12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 RAB1CQ92928 201 aa12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 NEIL1Q96FI4 390 aaPredicted RBP12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 FAM210BQ96KR6 192 aa12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 ABCA4P78363 2273 aa12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 ATRXP46100 2492 aa12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 TRGC2P03986 189 aa12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 ARL14EPLP0DKL9 152 aa12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 B2MP61769 119 aa12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 RBPJQ06330 500 aa12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 BSXQ3C1V8 233 aa12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 ABHD5Q8WTS1 349 aa12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 PLEKHA3Q9HB20 300 aa12.12□□□□□ -0.47
CLCNKA-201ENST00000331433 ANKHD1Q8IWZ3 2542 aaKnown RBP12.11□□□□□ -0.47
CLCNKA-201ENST00000331433 LRBAP50851 2863 aa12.11□□□□□ -0.47
CLCNKA-201ENST00000331433 VSTM5A8MXK1 200 aa12.11□□□□□ -0.47
CLCNKA-201ENST00000331433 DVL1O14640 695 aa12.11□□□□□ -0.47
CLCNKA-201ENST00000331433 NDUFB3O43676 98 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms