RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 C16orf82Q7Z2V1 217 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 SLC24A4Q8NFF2 622 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 TCEAL7Q9BRU2 100 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 NPVFQ9HCQ7 196 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 SLC25A10Q9UBX3 287 aaPredicted RBP11.92□□□□□ -0.5
TPM3-206ENST00000330188 OR51B2Q9Y5P1 312 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 HIST1H2BKO60814 126 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 FCN3O75636 299 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 CA2P00918 260 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 HIST1H2BJP06899 126 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 HOXA5P20719 270 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 HIST1H2BOP23527 126 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 NPPCP23582 126 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 HIST1H2BBP33778 126 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 HIST1H2BDP58876 126 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 HIST1H2BCP62807 126 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 HIST2H2BEQ16778 126 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.92□□□□□ -0.5
TPM3-206ENST00000330188 HIST1H2BHQ93079 126 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 HIST1H2BNQ99877 126 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 HIST1H2BMQ99879 126 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 ENY2Q9NPA8 101 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 SLC35D1Q9NTN3 355 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 DOK5Q9P104 306 aa11.92□□□□□ -0.5
TPM3-206ENST00000330188 SRRM4A7MD48 611 aaKnown RBP11.91□□□□□ -0.5
TPM3-206ENST00000330188 IGKV1-16P04430 117 aa11.91□□□□□ -0.5
TPM3-206ENST00000330188 S100A9P06702 114 aaKnown RBP11.91□□□□□ -0.5
TPM3-206ENST00000330188 NDUFA6P56556 154 aa11.91□□□□□ -0.5
TPM3-206ENST00000330188 MEF2CQ06413 473 aaPredicted RBP11.91□□□□□ -0.5
TPM3-206ENST00000330188 SPACA3Q8IXA5 215 aa11.91□□□□□ -0.5
TPM3-206ENST00000330188 OR10A7Q8NGE5 316 aa11.91□□□□□ -0.5
TPM3-206ENST00000330188 NANPQ8TBE9 248 aa11.91□□□□□ -0.5
TPM3-206ENST00000330188 GAL3ST2Q9H3Q3 398 aa11.91□□□□□ -0.5
TPM3-206ENST00000330188 SAP30LQ9HAJ7 183 aa11.91□□□□□ -0.5
TPM3-206ENST00000330188 PRNDQ9UKY0 176 aa11.91□□□□□ -0.5
TPM3-206ENST00000330188 CEP250Q9BV73 2442 aa11.91□□□□□ -0.5
TPM3-206ENST00000330188 UPK2O00526 184 aa11.9□□□□□ -0.5
TPM3-206ENST00000330188 ATP5G3P48201 142 aa11.9□□□□□ -0.5
TPM3-206ENST00000330188 TBR1Q16650 682 aa11.9□□□□□ -0.5
TPM3-206ENST00000330188 RTL8BQ17RB0 113 aa11.9□□□□□ -0.5
TPM3-206ENST00000330188 PRR30Q53SZ7 412 aaPredicted RBP11.9□□□□□ -0.5
TPM3-206ENST00000330188 ASCL5Q7RTU5 278 aa11.9□□□□□ -0.5
TPM3-206ENST00000330188 TMEM178BH3BS89 294 aa11.9□□□□□ -0.5
TPM3-206ENST00000330188 PFN1P07737 140 aaKnown RBP11.9□□□□□ -0.5
TPM3-206ENST00000330188 STAG3L2P0CL84 134 aa11.9□□□□□ -0.5
TPM3-206ENST00000330188 STAG3L3P0CL85 134 aa11.9□□□□□ -0.5
TPM3-206ENST00000330188 CCL3L1P16619 93 aa11.9□□□□□ -0.5
TPM3-206ENST00000330188 UBE2G2P60604 165 aa11.9□□□□□ -0.5
TPM3-206ENST00000330188 RPL31P62899 125 aaKnown RBP11.9□□□□□ -0.5
TPM3-206ENST00000330188 SPNS3Q6ZMD2 512 aa11.9□□□□□ -0.5
TPM3-206ENST00000330188 ZNF833PQ6ZTB9 187 aa11.9□□□□□ -0.5
TPM3-206ENST00000330188 ZNF257Q9Y2Q1 563 aa11.9□□□□□ -0.5
TPM3-206ENST00000330188 RP1L1Q8IWN7 2480 aaPredicted RBP11.89□□□□□ -0.51
TPM3-206ENST00000330188 PPIAL4EA0A075B759 164 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 PPIAL4DF5H284 164 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 TGOLN2O43493 480 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 PDE6DO43924 150 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 ARL14EPLP0DKL9 152 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 PPIAL4FP0DN26 164 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 B2MP61769 119 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 TEPPQ6URK8 271 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 SSX8Q7RTT4 187 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 ABHD5Q8WTS1 349 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 SSMEM1Q8WWF3 244 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 RND1Q92730 232 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 HINT2Q9BX68 163 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 KCNIP2Q9NS61 270 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 PPIAL4AQ9Y536 164 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 ATMQ13315 3056 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 ANKRD11Q6UB99 2663 aaPredicted RBP11.89□□□□□ -0.51
TPM3-206ENST00000330188 GVINP1Q7Z2Y8 2422 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 IFITM10A6NMD0 228 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 J3QR06 171 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 PHOX2AO14813 284 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 CDX1P47902 265 aaPredicted RBP11.89□□□□□ -0.51
TPM3-206ENST00000330188 GNB1P62873 340 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 PRCDQ00LT1 54 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 FOXC1Q12948 553 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 FRZBQ92765 325 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 NEUROG1Q92886 237 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 ZNF714Q96N38 554 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 WFIKKN1Q96NZ8 548 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 PYGO2Q9BRQ0 406 aa11.89□□□□□ -0.51
TPM3-206ENST00000330188 H7BYZ3 331 aa11.88□□□□□ -0.51
TPM3-206ENST00000330188 TNFRSF13BO14836 293 aaPredicted RBP11.88□□□□□ -0.51
TPM3-206ENST00000330188 VENTXO95231 258 aa11.88□□□□□ -0.51
TPM3-206ENST00000330188 TRGC1P0CF51 173 aa11.88□□□□□ -0.51
TPM3-206ENST00000330188 S100A12P80511 92 aa11.88□□□□□ -0.51
TPM3-206ENST00000330188 CST9LP1Q5W188 147 aa11.88□□□□□ -0.51
TPM3-206ENST00000330188 TMEM200BQ69YZ2 307 aa11.88□□□□□ -0.51
TPM3-206ENST00000330188 STPG3Q8N7X2 389 aa11.88□□□□□ -0.51
TPM3-206ENST00000330188 NECAP1Q8NC96 275 aa11.88□□□□□ -0.51
TPM3-206ENST00000330188 OR51G1Q8NGK1 321 aa11.88□□□□□ -0.51
TPM3-206ENST00000330188 LRFN3Q9BTN0 628 aa11.88□□□□□ -0.51
TPM3-206ENST00000330188 MRPL20Q9BYC9 149 aaKnown RBP11.88□□□□□ -0.51
TPM3-206ENST00000330188 PLEKHA3Q9HB20 300 aa11.88□□□□□ -0.51
TPM3-206ENST00000330188 SMG1Q96Q15 3661 aaKnown RBP11.88□□□□□ -0.51
TPM3-206ENST00000330188 TEX50A0A1B0GTY4 177 aa11.87□□□□□ -0.51
TPM3-206ENST00000330188 FNDC10F2Z333 226 aa11.87□□□□□ -0.51
TPM3-206ENST00000330188 CXorf1O96002 111 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms