RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 TMEM183BQ1AE95 376 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 C20orf204Q6ZNR8 217 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 CYP2G1PQ6ZSU1 146 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 NPIPB3Q92617 1050 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 SGK494Q96LW2 274 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 LIME1Q9H400 295 aa11.55□□□□□ -0.56
DNMT3B-202ENST00000328111 SLC31A2O15432 143 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 FA2HQ7L5A8 372 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 SSX7Q7RTT5 188 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 OR1P1Q8NH06 330 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 DMRTA2Q96SC8 542 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 HIST1H1BP16401 226 aaKnown RBP11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 CSRP1P21291 193 aaKnown RBP11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 SRP14P37108 136 aaKnown RBP11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 OR4A47Q6IF82 309 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 NHLRC2Q8NBF2 726 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 OR4C13Q8NGP0 309 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 PAM16Q9Y3D7 125 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 AUP1Q9Y679 476 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 KBTBD11-OT1A0A1B0GTJ5 212 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 KIR2DL2P43627 348 aaPredicted RBP11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 HNRNPA3P51991 378 aaKnown RBP11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 HERPUD1Q15011 391 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 ZNF146Q15072 292 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 RNFT1Q5M7Z0 435 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 PCSK4Q6UW60 755 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 TRBV23-1A0A0A0MS06 115 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 C8orf88P0DMB2 117 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 SELLP14151 372 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 ADCYAP1P18509 176 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 GCHFRP30047 84 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 SELENOTP62341 195 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 ASCL4Q6XD76 172 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 OR51G1Q8NGK1 321 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 OR51M1Q9H341 326 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 LPAR2Q9HBW0 351 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 DNAJC4Q9NNZ3 241 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 TNFRSF19Q9NS68 423 aa11.54□□□□□ -0.56
DNMT3B-202ENST00000328111 DLL1O00548 723 aa11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 IGKV1-5P01602 117 aa11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 ATP5G3P48201 142 aa11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 MDS2Q8NDY4 140 aa11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 VN1R17PQ8TDU5 208 aa11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 ABHD17AQ96GS6 310 aa11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 TUBA4BQ9H853 241 aa11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 SDF2L1Q9HCN8 221 aa11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 ZNF106Q9H2Y7 1883 aaKnown RBP11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 IGHV1-18A0A0C4DH31 117 aa11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 IL6RP08887 468 aaPredicted RBP11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 KIAA1644Q3SXP7 199 aa11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 COX19Q49B96 90 aa11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 IBA57Q5T440 356 aaKnown RBP11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 MMD2Q8IY49 270 aa11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 PRSS3P2Q8NHM4 247 aa11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 A0A0G2JRQ6 117 aa11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 H3BTX0 84 aa11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 ZNF137PP52743 207 aa11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 ZNF596Q8TC21 504 aa11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 COA4Q9NYJ1 87 aa11.53□□□□□ -0.56
DNMT3B-202ENST00000328111 PGPA6NDG6 321 aa11.52□□□□□ -0.56
DNMT3B-202ENST00000328111 COLCA2A8K830 154 aa11.52□□□□□ -0.56
DNMT3B-202ENST00000328111 HIST1H1EP10412 219 aaKnown RBP11.52□□□□□ -0.56
DNMT3B-202ENST00000328111 IGFBP2P18065 325 aa11.52□□□□□ -0.56
DNMT3B-202ENST00000328111 GATA2P23769 480 aaPredicted RBP11.52□□□□□ -0.56
DNMT3B-202ENST00000328111 NUBP1P53384 320 aa11.52□□□□□ -0.56
DNMT3B-202ENST00000328111 PKIAP61925 76 aa11.52□□□□□ -0.56
DNMT3B-202ENST00000328111 RPL30P62888 115 aaKnown RBP11.52□□□□□ -0.56
DNMT3B-202ENST00000328111 MORN2Q502X0 79 aa11.52□□□□□ -0.56
DNMT3B-202ENST00000328111 GGACTQ9BVM4 153 aa11.52□□□□□ -0.56
DNMT3B-202ENST00000328111 ZNF430Q9H8G1 570 aaPredicted RBP11.52□□□□□ -0.56
DNMT3B-202ENST00000328111 OR9G1Q8NH87 305 aa11.52□□□□□ -0.57
DNMT3B-202ENST00000328111 MALRD1Q5VYJ5 2156 aa11.52□□□□□ -0.57
DNMT3B-202ENST00000328111 CCL3L1P16619 93 aa11.52□□□□□ -0.57
DNMT3B-202ENST00000328111 COLCA1Q6ZS62 124 aa11.52□□□□□ -0.57
DNMT3B-202ENST00000328111 TBX15Q96SF7 602 aa11.52□□□□□ -0.57
DNMT3B-202ENST00000328111 CACNA1AO00555 2505 aa11.52□□□□□ -0.57
DNMT3B-202ENST00000328111 C9JQL5 133 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 M0R2Z0 102 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 LINC00205P59089 165 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 ARF6P62330 175 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 PEAR1Q5VY43 1037 aaPredicted RBP11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 Q6ZRM9 215 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 CYYR1Q96J86 154 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 MRPL37Q9BZE1 423 aaKnown RBP11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 METRNQ9UJH8 293 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 NOTCH2Q04721 2471 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 GRIFINA4D1Z8 144 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 LYL1P12980 280 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 SRSF7Q16629 238 aaKnown RBP eCLIP11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 HSPB9Q9BQS6 159 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 ZMAT5Q9UDW3 170 aaKnown RBP11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 TMSB15BA0A087X1C1 80 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 IGKV1-6A0A0C4DH72 117 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 CGAP01215 116 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 GCSAMLQ5JQS6 135 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 DOLPP1Q86YN1 238 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 LINC01560Q8TB33 94 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 SFRP2Q96HF1 295 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 APCSP02743 223 aa11.51□□□□□ -0.57
DNMT3B-202ENST00000328111 DUTP33316 252 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms