RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 C3orf56Q8N813 242 aa11.12□□□□□ -0.63
CMTM1-201ENST00000328020 LRTM2Q8N967 370 aa11.12□□□□□ -0.63
CMTM1-201ENST00000328020 SGMS2Q8NHU3 365 aa11.12□□□□□ -0.63
CMTM1-201ENST00000328020 LSM10Q969L4 123 aaKnown RBP11.12□□□□□ -0.63
CMTM1-201ENST00000328020 PDCD10Q9BUL8 212 aa11.12□□□□□ -0.63
CMTM1-201ENST00000328020 SHPKQ9UHJ6 478 aa11.12□□□□□ -0.63
CMTM1-201ENST00000328020 TRAV41A0A0B4J266 112 aa11.11□□□□□ -0.63
CMTM1-201ENST00000328020 ATP6V0E1O15342 81 aa11.11□□□□□ -0.63
CMTM1-201ENST00000328020 IFNA21P01568 189 aa11.11□□□□□ -0.63
CMTM1-201ENST00000328020 IL6RP08887 468 aaPredicted RBP11.11□□□□□ -0.63
CMTM1-201ENST00000328020 MECP2P51608 486 aaKnown RBP11.11□□□□□ -0.63
CMTM1-201ENST00000328020 PROK1P58294 105 aa11.11□□□□□ -0.63
CMTM1-201ENST00000328020 RGS21Q2M5E4 152 aa11.11□□□□□ -0.63
CMTM1-201ENST00000328020 TMEM95Q3KNT9 176 aa11.11□□□□□ -0.63
CMTM1-201ENST00000328020 AKIRIN2Q53H80 203 aa11.11□□□□□ -0.63
CMTM1-201ENST00000328020 HSD17B13Q7Z5P4 300 aaPredicted RBP11.11□□□□□ -0.63
CMTM1-201ENST00000328020 OR4X2Q8NGF9 303 aa11.11□□□□□ -0.63
CMTM1-201ENST00000328020 OR1L8Q8NGR8 309 aa11.11□□□□□ -0.63
CMTM1-201ENST00000328020 OR5B3Q8NH48 314 aa11.11□□□□□ -0.63
CMTM1-201ENST00000328020 SRSF12Q8WXF0 261 aaKnown RBP11.11□□□□□ -0.63
CMTM1-201ENST00000328020 TAF15Q92804 592 aaKnown RBP eCLIP11.11□□□□□ -0.63
CMTM1-201ENST00000328020 SRSF8Q9BRL6 282 aaKnown RBP11.11□□□□□ -0.63
CMTM1-201ENST00000328020 WNT10AQ9GZT5 417 aa11.11□□□□□ -0.63
CMTM1-201ENST00000328020 TMED3Q9Y3Q3 217 aa11.11□□□□□ -0.63
CMTM1-201ENST00000328020 OR51B2Q9Y5P1 312 aa11.11□□□□□ -0.63
CMTM1-201ENST00000328020 MSGN1A6NI15 193 aa11.1□□□□□ -0.63
CMTM1-201ENST00000328020 C15orf61A6NNL5 157 aa11.1□□□□□ -0.63
CMTM1-201ENST00000328020 INMT-MINDY4F8WBC2 141 aa11.1□□□□□ -0.63
CMTM1-201ENST00000328020 IGKV1-5P01602 117 aa11.1□□□□□ -0.63
CMTM1-201ENST00000328020 CRIP2P52943 208 aaPredicted RBP11.1□□□□□ -0.63
CMTM1-201ENST00000328020 ECSCRQ19T08 205 aa11.1□□□□□ -0.63
CMTM1-201ENST00000328020 TEX38Q6PEX7 206 aa11.1□□□□□ -0.63
CMTM1-201ENST00000328020 UNQ5815/PRO19632Q6UWF5 114 aa11.1□□□□□ -0.63
CMTM1-201ENST00000328020 SLC35G3Q8N808 338 aa11.1□□□□□ -0.63
CMTM1-201ENST00000328020 NOL4LQ96MY1 436 aaPredicted RBP11.1□□□□□ -0.63
CMTM1-201ENST00000328020 FYTTD1Q96QD9 318 aaKnown RBP11.1□□□□□ -0.63
CMTM1-201ENST00000328020 QTRT1Q9BXR0 403 aaKnown RBP11.1□□□□□ -0.63
CMTM1-201ENST00000328020 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.1□□□□□ -0.63
CMTM1-201ENST00000328020 TMEM14BQ9NUH8 114 aa11.1□□□□□ -0.63
CMTM1-201ENST00000328020 FOXA2Q9Y261 457 aaPredicted RBP11.1□□□□□ -0.63
CMTM1-201ENST00000328020 ZNF257Q9Y2Q1 563 aa11.1□□□□□ -0.63
CMTM1-201ENST00000328020 WSB1Q9Y6I7 421 aa11.1□□□□□ -0.63
CMTM1-201ENST00000328020 TENM1Q9UKZ4 2725 aa11.09□□□□□ -0.63
CMTM1-201ENST00000328020 LINC01548A6NM66 108 aa11.09□□□□□ -0.63
CMTM1-201ENST00000328020 IL5P05113 134 aa11.09□□□□□ -0.63
CMTM1-201ENST00000328020 TRAPPC2P0DI81 140 aa11.09□□□□□ -0.63
CMTM1-201ENST00000328020 TRAPPC2BP0DI82 140 aa11.09□□□□□ -0.63
CMTM1-201ENST00000328020 SULT1A3P0DMM9 295 aa11.09□□□□□ -0.63
CMTM1-201ENST00000328020 SULT1A4P0DMN0 295 aa11.09□□□□□ -0.63
CMTM1-201ENST00000328020 NDPQ00604 133 aa11.09□□□□□ -0.63
CMTM1-201ENST00000328020 ANKRD55Q3KP44 614 aa11.09□□□□□ -0.63
CMTM1-201ENST00000328020 TMEM65Q6PI78 240 aa11.09□□□□□ -0.63
CMTM1-201ENST00000328020 ZNF429Q86V71 674 aa11.09□□□□□ -0.63
CMTM1-201ENST00000328020 LFNGQ8NES3 379 aa11.09□□□□□ -0.63
CMTM1-201ENST00000328020 OR5AU1Q8NGC0 362 aa11.09□□□□□ -0.63
CMTM1-201ENST00000328020 OR5M8Q8NGP6 311 aa11.09□□□□□ -0.63
CMTM1-201ENST00000328020 LHFPL5Q8TAF8 219 aa11.09□□□□□ -0.63
CMTM1-201ENST00000328020 ZNF431Q8TF32 576 aaPredicted RBP11.09□□□□□ -0.63
CMTM1-201ENST00000328020 MITD1Q8WV92 249 aa11.09□□□□□ -0.63
CMTM1-201ENST00000328020 MARVELD1Q9BSK0 173 aa11.09□□□□□ -0.63
CMTM1-201ENST00000328020 LINC00527Q9UJ94 153 aa11.09□□□□□ -0.63
CMTM1-201ENST00000328020 TRAV3A0A0B4J244 114 aa11.08□□□□□ -0.64
CMTM1-201ENST00000328020 A0A1B0GU03 582 aa11.08□□□□□ -0.64
CMTM1-201ENST00000328020 A0A1W2PN81 502 aa11.08□□□□□ -0.64
CMTM1-201ENST00000328020 CYB5BO43169 146 aa11.08□□□□□ -0.64
CMTM1-201ENST00000328020 IFNA17P01571 189 aa11.08□□□□□ -0.64
CMTM1-201ENST00000328020 ELANEP08246 267 aa11.08□□□□□ -0.64
CMTM1-201ENST00000328020 OR9G9P0C7N8 305 aa11.08□□□□□ -0.64
CMTM1-201ENST00000328020 P0C879 139 aa11.08□□□□□ -0.64
CMTM1-201ENST00000328020 CHRNA7P36544 502 aa11.08□□□□□ -0.64
CMTM1-201ENST00000328020 OR2B8PP59922 312 aa11.08□□□□□ -0.64
CMTM1-201ENST00000328020 HSPE1P61604 102 aaKnown RBP11.08□□□□□ -0.64
CMTM1-201ENST00000328020 MRGPRG-AS1Q2M3A8 158 aa11.08□□□□□ -0.64
CMTM1-201ENST00000328020 CXorf66Q5JRM2 361 aaPredicted RBP11.08□□□□□ -0.64
CMTM1-201ENST00000328020 LYZL2Q7Z4W2 148 aa11.08□□□□□ -0.64
CMTM1-201ENST00000328020 WFDC12Q8WWY7 111 aa11.08□□□□□ -0.64
CMTM1-201ENST00000328020 FAM103A1Q9BTL3 118 aaKnown RBP11.08□□□□□ -0.64
CMTM1-201ENST00000328020 ZNF747Q9BV97 191 aa11.08□□□□□ -0.64
CMTM1-201ENST00000328020 HINT2Q9BX68 163 aa11.08□□□□□ -0.64
CMTM1-201ENST00000328020 ENY2Q9NPA8 101 aa11.08□□□□□ -0.64
CMTM1-201ENST00000328020 COA4Q9NYJ1 87 aa11.08□□□□□ -0.64
CMTM1-201ENST00000328020 NSG2Q9Y328 171 aa11.08□□□□□ -0.64
CMTM1-201ENST00000328020 TEX50A0A1B0GTY4 177 aa11.07□□□□□ -0.64
CMTM1-201ENST00000328020 SNRPGP15A8MWD9 76 aa11.07□□□□□ -0.64
CMTM1-201ENST00000328020 H3BUA1 57 aa11.07□□□□□ -0.64
CMTM1-201ENST00000328020 FBXO24O75426 580 aa11.07□□□□□ -0.64
CMTM1-201ENST00000328020 IGHG4P01861 327 aa11.07□□□□□ -0.64
CMTM1-201ENST00000328020 OPN1MWP04001 364 aa11.07□□□□□ -0.64
CMTM1-201ENST00000328020 OPN1MW2P0DN77 364 aa11.07□□□□□ -0.64
CMTM1-201ENST00000328020 OPN1MW3P0DN78 364 aa11.07□□□□□ -0.64
CMTM1-201ENST00000328020 EGR2P11161 476 aaPredicted RBP11.07□□□□□ -0.64
CMTM1-201ENST00000328020 SLC25A6P12236 298 aa11.07□□□□□ -0.64
CMTM1-201ENST00000328020 FOXE3Q13461 319 aa11.07□□□□□ -0.64
CMTM1-201ENST00000328020 SMCO1Q147U7 214 aa11.07□□□□□ -0.64
CMTM1-201ENST00000328020 NMSQ5H8A3 153 aa11.07□□□□□ -0.64
CMTM1-201ENST00000328020 SHISA2Q6UWI4 295 aa11.07□□□□□ -0.64
CMTM1-201ENST00000328020 C12orf45Q8N5I9 185 aaPredicted RBP11.07□□□□□ -0.64
CMTM1-201ENST00000328020 MINDY2Q8NBR6 621 aa11.07□□□□□ -0.64
CMTM1-201ENST00000328020 PRR13Q9NZ81 148 aa11.07□□□□□ -0.64
CMTM1-201ENST00000328020 CACNG5Q9UF02 275 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms