RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 TRAV24A0A0B4J272 114 aa17.83■□□□□ 0.44
RNF40-201ENST00000324685 TRGV3P03979 118 aa17.83■□□□□ 0.44
RNF40-201ENST00000324685 APOBEC3AP31941 199 aaPredicted RBP17.83■□□□□ 0.44
RNF40-201ENST00000324685 MIA3Q5JRA6 1907 aa17.83■□□□□ 0.44
RNF40-201ENST00000324685 LOC101059948A0A1B0GTJ6 334 aa17.83■□□□□ 0.44
RNF40-201ENST00000324685 NUTF2P61970 127 aaKnown RBP17.83■□□□□ 0.44
RNF40-201ENST00000324685 TMEM262E9PQX1 116 aa17.82■□□□□ 0.44
RNF40-201ENST00000324685 APOHP02749 345 aaPredicted RBP17.82■□□□□ 0.44
RNF40-201ENST00000324685 A0A1B0GV90 55 aa17.82■□□□□ 0.44
RNF40-201ENST00000324685 LAIR2Q6ISS4 152 aa17.82■□□□□ 0.44
RNF40-201ENST00000324685 WDR82Q6UXN9 313 aa17.82■□□□□ 0.44
RNF40-201ENST00000324685 TMEM74BQ9NUR3 256 aa17.82■□□□□ 0.44
RNF40-201ENST00000324685 A0A087WWC5 75 aa17.82■□□□□ 0.44
RNF40-201ENST00000324685 RPP21Q9H633 154 aaKnown RBP17.82■□□□□ 0.44
RNF40-201ENST00000324685 H3BRM9 83 aa17.82■□□□□ 0.44
RNF40-201ENST00000324685 CGAP01215 116 aa17.82■□□□□ 0.44
RNF40-201ENST00000324685 GLRXP35754 106 aa17.82■□□□□ 0.44
RNF40-201ENST00000324685 TIMM23BQ5SRD1 257 aa17.82■□□□□ 0.44
RNF40-201ENST00000324685 EGR1P18146 543 aa17.81■□□□□ 0.44
RNF40-201ENST00000324685 AICDAQ9GZX7 198 aa17.81■□□□□ 0.44
RNF40-201ENST00000324685 C12orf77C9JDV5 145 aa17.81■□□□□ 0.44
RNF40-201ENST00000324685 ZP1P60852 638 aa17.81■□□□□ 0.44
RNF40-201ENST00000324685 SRP19P09132 144 aaKnown RBP17.81■□□□□ 0.44
RNF40-201ENST00000324685 UCP1P25874 307 aa17.81■□□□□ 0.44
RNF40-201ENST00000324685 NRN1LQ496H8 165 aa17.81■□□□□ 0.44
RNF40-201ENST00000324685 SPSB2Q99619 263 aa17.81■□□□□ 0.44
RNF40-201ENST00000324685 TBL2Q9Y4P3 447 aaKnown RBP17.81■□□□□ 0.44
RNF40-201ENST00000324685 IGHV3-48P01763 117 aa17.81■□□□□ 0.44
RNF40-201ENST00000324685 FOXA3P55318 350 aaPredicted RBP17.8■□□□□ 0.44
RNF40-201ENST00000324685 ZNRF1Q8ND25 227 aa17.8■□□□□ 0.44
RNF40-201ENST00000324685 SCGB3A1Q96QR1 104 aa17.8■□□□□ 0.44
RNF40-201ENST00000324685 TMEM106BQ9NUM4 274 aa17.8■□□□□ 0.44
RNF40-201ENST00000324685 A0A1B0GUT8 65 aa17.8■□□□□ 0.44
RNF40-201ENST00000324685 C9JCJ5 164 aa17.8■□□□□ 0.44
RNF40-201ENST00000324685 IGFBP2P18065 325 aa17.8■□□□□ 0.44
RNF40-201ENST00000324685 TFF3Q07654 80 aa17.8■□□□□ 0.44
RNF40-201ENST00000324685 CNTRLQ7Z7A1 2325 aa17.8■□□□□ 0.44
RNF40-201ENST00000324685 CD69Q07108 199 aa17.8■□□□□ 0.44
RNF40-201ENST00000324685 DPH3Q96FX2 82 aa17.8■□□□□ 0.44
RNF40-201ENST00000324685 FOXJ2Q9P0K8 574 aa17.8■□□□□ 0.44
RNF40-201ENST00000324685 HAX1O00165 279 aa17.8■□□□□ 0.44
RNF40-201ENST00000324685 CTSBP07858 339 aa17.8■□□□□ 0.44
RNF40-201ENST00000324685 ATXN7O15265 892 aaPredicted RBP17.8■□□□□ 0.44
RNF40-201ENST00000324685 HOXA5P20719 270 aa17.8■□□□□ 0.44
RNF40-201ENST00000324685 CSRP3P50461 194 aa17.8■□□□□ 0.44
RNF40-201ENST00000324685 ZFC3H1O60293 1989 aaKnown RBP17.79■□□□□ 0.44
RNF40-201ENST00000324685 PF4P02776 101 aa17.79■□□□□ 0.44
RNF40-201ENST00000324685 CIARTQ8N365 385 aaPredicted RBP17.79■□□□□ 0.44
RNF40-201ENST00000324685 RNASEH2CQ8TDP1 164 aaKnown RBP17.79■□□□□ 0.44
RNF40-201ENST00000324685 SCO2A0A1W2PP80 73 aa17.79■□□□□ 0.44
RNF40-201ENST00000324685 PSMB11A5LHX3 300 aa17.79■□□□□ 0.44
RNF40-201ENST00000324685 C1orf162Q8NEQ5 155 aaPredicted RBP17.79■□□□□ 0.44
RNF40-201ENST00000324685 C18orf15Q96N68 181 aa17.79■□□□□ 0.44
RNF40-201ENST00000324685 IZUMO1RA6ND01 250 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 FAM90A1Q86YD7 464 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 DPM3Q9P2X0 92 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 FBXL7Q9UJT9 491 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 A0A0G2JLM5 398 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 SPRED2Q7Z698 418 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 ZNF703Q9H7S9 590 aaPredicted RBP17.78■□□□□ 0.44
RNF40-201ENST00000324685 M0R381 172 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 SP9P0CG40 484 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 TGIF1Q15583 401 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 PPP1R32Q7Z5V6 425 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 OR52E5Q8NH55 327 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 C19orf67A6NJJ6 358 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 IGKV3-20P01619 116 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 PAX1P15863 534 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 WNT10AQ9GZT5 417 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 VCX2Q9H322 139 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 SLC17A3O00476 420 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 CACNG8Q8WXS5 425 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 SDHCQ99643 169 aaPredicted RBP17.78■□□□□ 0.44
RNF40-201ENST00000324685 FOXC2Q99958 501 aa17.78■□□□□ 0.44
RNF40-201ENST00000324685 RTBDNQ9BSG5 229 aaPredicted RBP17.78■□□□□ 0.44
RNF40-201ENST00000324685 FOXA2Q9Y261 457 aaPredicted RBP17.78■□□□□ 0.44
RNF40-201ENST00000324685 SEMA5BQ9P283 1151 aa17.77■□□□□ 0.44
RNF40-201ENST00000324685 ZNF646O15015 1829 aaPredicted RBP17.77■□□□□ 0.44
RNF40-201ENST00000324685 A0A1B0GV72 72 aa17.77■□□□□ 0.43
RNF40-201ENST00000324685 C1QL2Q7Z5L3 287 aa17.77■□□□□ 0.43
RNF40-201ENST00000324685 ZNF418Q8TF45 676 aaPredicted RBP17.77■□□□□ 0.43
RNF40-201ENST00000324685 PRR19A6NJB7 356 aa17.77■□□□□ 0.43
RNF40-201ENST00000324685 BEND2Q8NDZ0 799 aa17.77■□□□□ 0.43
RNF40-201ENST00000324685 CHCHD2Q9Y6H1 151 aaPredicted RBP17.77■□□□□ 0.43
RNF40-201ENST00000324685 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.77■□□□□ 0.43
RNF40-201ENST00000324685 C17orf98A8MV24 154 aa17.76■□□□□ 0.43
RNF40-201ENST00000324685 PCM1Q15154 2024 aa17.76■□□□□ 0.43
RNF40-201ENST00000324685 KBTBD11-OT1A0A1B0GTJ5 212 aa17.76■□□□□ 0.43
RNF40-201ENST00000324685 MSGN1A6NI15 193 aa17.76■□□□□ 0.43
RNF40-201ENST00000324685 IGHV3-23P01764 117 aa17.76■□□□□ 0.43
RNF40-201ENST00000324685 FBXL15Q9H469 300 aa17.76■□□□□ 0.43
RNF40-201ENST00000324685 C21orf62Q9NYP8 219 aa17.76■□□□□ 0.43
RNF40-201ENST00000324685 ATP1A1-AS1Q5TC04 95 aa17.76■□□□□ 0.43
RNF40-201ENST00000324685 C1QTNF5Q9BXJ0 243 aa17.76■□□□□ 0.43
RNF40-201ENST00000324685 PPP1R27Q86WC6 154 aa17.76■□□□□ 0.43
RNF40-201ENST00000324685 NEU4Q8WWR8 484 aaPredicted RBP17.76■□□□□ 0.43
RNF40-201ENST00000324685 SDF2L1Q9HCN8 221 aa17.76■□□□□ 0.43
RNF40-201ENST00000324685 SCN3AQ9NY46 2000 aa17.76■□□□□ 0.43
RNF40-201ENST00000324685 IGHV3-35A0A0C4DH35 117 aa17.75■□□□□ 0.43
RNF40-201ENST00000324685 SAMD13Q5VXD3 122 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms