RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 LINC00470Q9BZP3 86 aa13.01□□□□□ -0.33
GCFC2-201ENST00000321027 RABAC1Q9UI14 185 aa13.01□□□□□ -0.33
GCFC2-201ENST00000321027 FOXD3Q9UJU5 478 aaPredicted RBP13.01□□□□□ -0.33
GCFC2-201ENST00000321027 SLC25A17O43808 307 aa13.01□□□□□ -0.33
GCFC2-201ENST00000321027 CELA3BP08861 270 aa13.01□□□□□ -0.33
GCFC2-201ENST00000321027 IBA57Q5T440 356 aaKnown RBP13.01□□□□□ -0.33
GCFC2-201ENST00000321027 C1orf185Q5T7R7 199 aa13.01□□□□□ -0.33
GCFC2-201ENST00000321027 EAF1Q96JC9 268 aaPredicted RBP13.01□□□□□ -0.33
GCFC2-201ENST00000321027 PGPA6NDG6 321 aa13.01□□□□□ -0.33
GCFC2-201ENST00000321027 C9JQL5 133 aa13.01□□□□□ -0.33
GCFC2-201ENST00000321027 RPL8P62917 257 aaKnown RBP13.01□□□□□ -0.33
GCFC2-201ENST00000321027 LRRC75BQ2VPJ9 315 aa13.01□□□□□ -0.33
GCFC2-201ENST00000321027 KRTCAP3Q53RY4 240 aa13.01□□□□□ -0.33
GCFC2-201ENST00000321027 TUBA4BQ9H853 241 aa13.01□□□□□ -0.33
GCFC2-201ENST00000321027 PINLYPA6NC86 204 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 TNFSF10P50591 281 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 TFF3Q07654 80 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 C21orf62-AS1Q17RA5 79 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 PQLC2Q6ZP29 291 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 SSX8Q7RTT4 187 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 WFDC3Q8IUB2 231 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 ZNF525Q8N782 197 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 PLPPR1Q8TBJ4 325 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 UBTD1Q9HAC8 227 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 CALYQ9NYX4 217 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 SPG11Q96JI7 2443 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 H3BTX0 84 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 TFF1P04155 84 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 OR4D5Q8NGN0 318 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 NOTCH2Q04721 2471 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 IFITM10A6NMD0 228 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 CCL21O00585 134 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 CD99P14209 185 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 TMEM45BQ96B21 275 aa13□□□□□ -0.33
GCFC2-201ENST00000321027 QTRT1Q9BXR0 403 aaKnown RBP13□□□□□ -0.33
GCFC2-201ENST00000321027 HOXA5P20719 270 aa12.99□□□□□ -0.33
GCFC2-201ENST00000321027 SRSF4Q08170 494 aaKnown RBP12.99□□□□□ -0.33
GCFC2-201ENST00000321027 SLC25A33Q9BSK2 321 aa12.99□□□□□ -0.33
GCFC2-201ENST00000321027 MRPL37Q9BZE1 423 aaKnown RBP12.99□□□□□ -0.33
GCFC2-201ENST00000321027 HIGD1AQ9Y241 93 aa12.99□□□□□ -0.33
GCFC2-201ENST00000321027 TCF19Q9Y242 345 aa12.99□□□□□ -0.33
GCFC2-201ENST00000321027 TMEM250H0YL14 139 aa12.99□□□□□ -0.33
GCFC2-201ENST00000321027 GBGT1Q8N5D6 347 aa12.99□□□□□ -0.33
GCFC2-201ENST00000321027 ZDHHC8Q9ULC8 765 aa12.99□□□□□ -0.33
GCFC2-201ENST00000321027 PLXNB3Q9ULL4 1909 aa12.99□□□□□ -0.33
GCFC2-201ENST00000321027 MGPP08493 103 aa12.99□□□□□ -0.33
GCFC2-201ENST00000321027 CD81P60033 236 aa12.99□□□□□ -0.33
GCFC2-201ENST00000321027 PSG7Q13046 419 aa12.99□□□□□ -0.33
GCFC2-201ENST00000321027 RPL39P5Q59GN2 51 aa12.99□□□□□ -0.33
GCFC2-201ENST00000321027 SRP14P37108 136 aaKnown RBP12.99□□□□□ -0.33
GCFC2-201ENST00000321027 HSPE1P61604 102 aaKnown RBP12.99□□□□□ -0.33
GCFC2-201ENST00000321027 RELBQ01201 579 aa12.99□□□□□ -0.33
GCFC2-201ENST00000321027 TRAV24A0A0B4J272 114 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 A0A1B0GV90 55 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 CRYBB3P26998 211 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 SRSF9Q13242 221 aaKnown RBP eCLIP12.98□□□□□ -0.339e-7■■□□□ 12.4
GCFC2-201ENST00000321027 ABLIM2Q6H8Q1 611 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 ASCL5Q7RTU5 278 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 DOLPP1Q86YN1 238 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 VSIRQ9H7M9 311 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 M0QZK8 103 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 GGCTO75223 188 aaKnown RBP12.98□□□□□ -0.33
GCFC2-201ENST00000321027 HOXA4Q00056 320 aaPredicted RBP12.98□□□□□ -0.33
GCFC2-201ENST00000321027 SPANXN1Q5VSR9 72 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 BPIFA4PQ86YQ2 179 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 BMPERQ8N8U9 685 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 NPCDR1Q9BY65 106 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 LHX2P50458 406 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 NUBP1P53384 320 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 SELENOTP62341 195 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 CYP2G1PQ6ZSU1 146 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 LRTM2Q8N967 370 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 OR5R1Q8NH85 324 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 SDF2L1Q9HCN8 221 aa12.98□□□□□ -0.33
GCFC2-201ENST00000321027 CIDEAO60543 219 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 RPLP1P05386 114 aaKnown RBP12.97□□□□□ -0.33
GCFC2-201ENST00000321027 CBLN4Q9NTU7 201 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 HIST1H2BKO60814 126 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 HIST1H2BJP06899 126 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 HIST1H2BOP23527 126 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 HIST1H2BBP33778 126 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 CLDN18P56856 261 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 HIST1H2BDP58876 126 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 HIST1H2BCP62807 126 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 HIST2H2BEQ16778 126 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.97□□□□□ -0.33
GCFC2-201ENST00000321027 FAM201AQ5SY85 155 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 Q6ZT83 130 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 OR51G1Q8NGK1 321 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 HIST1H2BHQ93079 126 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 HIST1H2BNQ99877 126 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 HIST1H2BMQ99879 126 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 NMUP48645 174 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 MST1LQ2TV78 715 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 OR13A1Q8NGR1 328 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 TMEM171Q8WVE6 324 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 C1orf147Q96MC9 270 aaPredicted RBP12.97□□□□□ -0.33
GCFC2-201ENST00000321027 HSPB8Q9UJY1 196 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 MT-ND6P03923 174 aa12.97□□□□□ -0.33
GCFC2-201ENST00000321027 CBLN1P23435 193 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms