RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 C15orf61A6NNL5 157 aa12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 KCNAB3O43448 404 aa12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 NDUFA3O95167 84 aa12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 AMY1AP04745 511 aa12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 NDPQ00604 133 aa12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 TMEM95Q3KNT9 176 aa12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 ZBTB8BQ8NAP8 495 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 OR10W1Q8NGF6 305 aa12.23□□□□□ -0.45
PDLIM5-202ENST00000318007 JMJD1CQ15652 2540 aa12.22□□□□□ -0.45
PDLIM5-202ENST00000318007 DUXBA0A1W2PPF3 345 aa12.22□□□□□ -0.45
PDLIM5-202ENST00000318007 HMX3A6NHT5 357 aa12.22□□□□□ -0.45
PDLIM5-202ENST00000318007 CCNKO75909 580 aa12.22□□□□□ -0.45
PDLIM5-202ENST00000318007 REG1AP05451 166 aa12.22□□□□□ -0.45
PDLIM5-202ENST00000318007 CRYGBP07316 175 aa12.22□□□□□ -0.45
PDLIM5-202ENST00000318007 POLR2GP62487 172 aaKnown RBP eCLIP12.22□□□□□ -0.45
PDLIM5-202ENST00000318007 PRSS8Q16651 343 aa12.22□□□□□ -0.45
PDLIM5-202ENST00000318007 Q5BKY6 102 aa12.22□□□□□ -0.45
PDLIM5-202ENST00000318007 OR5R1Q8NH85 324 aa12.22□□□□□ -0.45
PDLIM5-202ENST00000318007 ZNF418Q8TF45 676 aaPredicted RBP12.22□□□□□ -0.45
PDLIM5-202ENST00000318007 AIFM2Q9BRQ8 373 aa12.22□□□□□ -0.45
PDLIM5-202ENST00000318007 COMMD5Q9GZQ3 224 aa12.22□□□□□ -0.45
PDLIM5-202ENST00000318007 C1RLQ9NZP8 487 aa12.22□□□□□ -0.45
PDLIM5-202ENST00000318007 FAM181BA6NEQ2 426 aa12.21□□□□□ -0.45
PDLIM5-202ENST00000318007 SSSCA1O60232 199 aa12.21□□□□□ -0.45
PDLIM5-202ENST00000318007 FAM157CP0CG43 387 aa12.21□□□□□ -0.45
PDLIM5-202ENST00000318007 IAPPP10997 89 aa12.21□□□□□ -0.45
PDLIM5-202ENST00000318007 HLA-GP17693 338 aa12.21□□□□□ -0.45
PDLIM5-202ENST00000318007 SSBP2P81877 361 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-202ENST00000318007 SCGB2A2Q13296 93 aa12.21□□□□□ -0.45
PDLIM5-202ENST00000318007 RAB32Q13637 225 aa12.21□□□□□ -0.45
PDLIM5-202ENST00000318007 POU2AF1Q16633 256 aa12.21□□□□□ -0.45
PDLIM5-202ENST00000318007 C19orf35Q6ZS72 473 aa12.21□□□□□ -0.45
PDLIM5-202ENST00000318007 TEX45Q8NA69 505 aa12.21□□□□□ -0.45
PDLIM5-202ENST00000318007 TMEM167AQ8TBQ9 72 aa12.21□□□□□ -0.45
PDLIM5-202ENST00000318007 PPP1R1CQ8WVI7 109 aa12.21□□□□□ -0.45
PDLIM5-202ENST00000318007 C2orf50Q96LR7 162 aa12.21□□□□□ -0.45
PDLIM5-202ENST00000318007 RNF5Q99942 180 aa12.21□□□□□ -0.45
PDLIM5-202ENST00000318007 PARP11Q9NR21 331 aa12.21□□□□□ -0.45
PDLIM5-202ENST00000318007 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-202ENST00000318007 SETD2Q9BYW2 2564 aaPredicted RBP12.21□□□□□ -0.45
PDLIM5-202ENST00000318007 A0A1B0GU03 582 aa12.21□□□□□ -0.46
PDLIM5-202ENST00000318007 H3BP45 60 aa12.21□□□□□ -0.46
PDLIM5-202ENST00000318007 SPDEFO95238 335 aa12.21□□□□□ -0.46
PDLIM5-202ENST00000318007 NKX2-1P43699 371 aaPredicted RBP12.21□□□□□ -0.46
PDLIM5-202ENST00000318007 CX3CL1P78423 397 aa12.21□□□□□ -0.46
PDLIM5-202ENST00000318007 AANATQ16613 207 aa12.21□□□□□ -0.46
PDLIM5-202ENST00000318007 ARSJQ5FYB0 599 aaPredicted RBP12.21□□□□□ -0.46
PDLIM5-202ENST00000318007 AKAP14Q86UN6 197 aa12.21□□□□□ -0.46
PDLIM5-202ENST00000318007 SPIN2AQ99865 258 aa12.21□□□□□ -0.46
PDLIM5-202ENST00000318007 SPIN2BQ9BPZ2 258 aa12.21□□□□□ -0.46
PDLIM5-202ENST00000318007 FBXO7Q9Y3I1 522 aa12.21□□□□□ -0.46
PDLIM5-202ENST00000318007 TEX50A0A1B0GTY4 177 aa12.2□□□□□ -0.46
PDLIM5-202ENST00000318007 CEBPZOSA8MTT3 80 aa12.2□□□□□ -0.46
PDLIM5-202ENST00000318007 WRBO00258 174 aa12.2□□□□□ -0.46
PDLIM5-202ENST00000318007 GPR137BO60478 399 aa12.2□□□□□ -0.46
PDLIM5-202ENST00000318007 MBPP02686 304 aaPredicted RBP12.2□□□□□ -0.46
PDLIM5-202ENST00000318007 FXYD3Q14802 87 aa12.2□□□□□ -0.46
PDLIM5-202ENST00000318007 OR4D5Q8NGN0 318 aa12.2□□□□□ -0.46
PDLIM5-202ENST00000318007 OR2T35Q8NGX2 323 aa12.2□□□□□ -0.46
PDLIM5-202ENST00000318007 PRDM13Q9H4Q3 707 aa12.2□□□□□ -0.46
PDLIM5-202ENST00000318007 TMEM14BQ9NUH8 114 aa12.2□□□□□ -0.46
PDLIM5-202ENST00000318007 IGHV7-81A0A0B4J1V7 117 aa12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 A0A1B0GW64 132 aa12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 HOXA1P49639 335 aaPredicted RBP12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 ECSCRQ19T08 205 aa12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 MMD2Q8IY49 270 aa12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 SRSF12Q8WXF0 261 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 NOL4LQ96MY1 436 aaPredicted RBP12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 PRNDQ9UKY0 176 aa12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 PAIP2BQ9ULR5 123 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 MSGN1A6NI15 193 aa12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 ATP6V0E1O15342 81 aa12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 PFDN1O60925 122 aa12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 IL6RP08887 468 aaPredicted RBP12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 COMPP49747 757 aaPredicted RBP12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 TNFRSF9Q07011 255 aa12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 OR8H1Q8NGG4 311 aa12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 RBKSQ9H477 322 aa12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 FOXA2Q9Y261 457 aaPredicted RBP12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 POMT1Q9Y6A1 747 aa12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 WSB1Q9Y6I7 421 aa12.19□□□□□ -0.46
PDLIM5-202ENST00000318007 CGB1A6NKQ9 187 aa12.18□□□□□ -0.46
PDLIM5-202ENST00000318007 PITX3O75364 302 aa12.18□□□□□ -0.46
PDLIM5-202ENST00000318007 HILS1P60008 231 aa12.18□□□□□ -0.46
PDLIM5-202ENST00000318007 ARPC1AQ92747 370 aa12.18□□□□□ -0.46
PDLIM5-202ENST00000318007 ST6GAL2Q96JF0 529 aa12.18□□□□□ -0.46
PDLIM5-202ENST00000318007 RCL1Q9Y2P8 373 aaKnown RBP12.18□□□□□ -0.46
PDLIM5-202ENST00000318007 PIGBOS1A0A0B4J2F0 54 aa12.18□□□□□ -0.46
PDLIM5-202ENST00000318007 TRIM77I1YAP6 450 aa12.18□□□□□ -0.46
PDLIM5-202ENST00000318007 AREGP15514 252 aa12.18□□□□□ -0.46
PDLIM5-202ENST00000318007 RPL27AP46776 148 aaKnown RBP12.18□□□□□ -0.46
PDLIM5-202ENST00000318007 LFNGQ8NES3 379 aa12.18□□□□□ -0.46
PDLIM5-202ENST00000318007 OR4A5Q8NH83 315 aa12.18□□□□□ -0.46
PDLIM5-202ENST00000318007 NMES1Q9C002 83 aa12.18□□□□□ -0.46
PDLIM5-202ENST00000318007 OR5AC2Q9NZP5 309 aa12.18□□□□□ -0.46
PDLIM5-202ENST00000318007 G3V318 75 aa12.17□□□□□ -0.46
PDLIM5-202ENST00000318007 K7EPK0 472 aa12.17□□□□□ -0.46
PDLIM5-202ENST00000318007 FGF16O43320 207 aa12.17□□□□□ -0.46
PDLIM5-202ENST00000318007 HLA-DRB1P01911 266 aa12.17□□□□□ -0.46
PDLIM5-202ENST00000318007 GIPP09681 153 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms