RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 MED13LQ71F56 2210 aa12.07□□□□□ -0.48
CLK4-201ENST00000316308 C15orf61A6NNL5 157 aa12.07□□□□□ -0.48
CLK4-201ENST00000316308 CLN5O75503 358 aa12.07□□□□□ -0.48
CLK4-201ENST00000316308 CDC34P49427 236 aaPredicted RBP12.07□□□□□ -0.48
CLK4-201ENST00000316308 TBR1Q16650 682 aa12.07□□□□□ -0.48
CLK4-201ENST00000316308 SPTBN1Q01082 2364 aaKnown RBP12.07□□□□□ -0.48
CLK4-201ENST00000316308 ARHGAP32A7KAX9 2087 aa12.07□□□□□ -0.48
CLK4-201ENST00000316308 E7EUB6 86 aa12.07□□□□□ -0.48
CLK4-201ENST00000316308 CA2P00918 260 aa12.07□□□□□ -0.48
CLK4-201ENST00000316308 C3orf36Q3SXR2 165 aa12.07□□□□□ -0.48
CLK4-201ENST00000316308 PDZD11Q5EBL8 140 aa12.07□□□□□ -0.48
CLK4-201ENST00000316308 NUP37Q8NFH4 326 aa12.07□□□□□ -0.48
CLK4-201ENST00000316308 OR10W1Q8NGF6 305 aa12.07□□□□□ -0.48
CLK4-201ENST00000316308 OR4S2Q8NH73 311 aa12.07□□□□□ -0.48
CLK4-201ENST00000316308 ACTR3CQ9C0K3 210 aaPredicted RBP12.07□□□□□ -0.48
CLK4-201ENST00000316308 LYNX1G3V0Z9 82 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 RBFOX2O43251 390 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLK4-201ENST00000316308 HIST1H2BKO60814 126 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 PLAUP00749 431 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 HIST1H2BJP06899 126 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 LYNX1P0DP58 116 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 HIST1H2BOP23527 126 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 GATA2P23769 480 aaPredicted RBP12.06□□□□□ -0.48
CLK4-201ENST00000316308 GRNP28799 593 aaKnown RBP12.06□□□□□ -0.48
CLK4-201ENST00000316308 HIST1H2BBP33778 126 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 NUBP1P53384 320 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 HIST1H2BDP58876 126 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 HIST1H2BCP62807 126 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 RPL23P62829 140 aaKnown RBP12.06□□□□□ -0.48
CLK4-201ENST00000316308 HIST2H2BEQ16778 126 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.06□□□□□ -0.48
CLK4-201ENST00000316308 ABHD5Q8WTS1 349 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 HIST1H2BHQ93079 126 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 HIST1H2BNQ99877 126 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 HIST1H2BMQ99879 126 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 GGTLC1Q9BX51 225 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 SEPSECSQ9HD40 501 aaKnown RBP12.06□□□□□ -0.48
CLK4-201ENST00000316308 SLC25A10Q9UBX3 287 aaPredicted RBP12.06□□□□□ -0.48
CLK4-201ENST00000316308 NDUFA6P56556 154 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 TEX36Q5VZQ5 186 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 C16orf82Q7Z2V1 217 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 P2RX4Q99571 388 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 DOK5Q9P104 306 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 CTSZQ9UBR2 303 aa12.06□□□□□ -0.48
CLK4-201ENST00000316308 RPUSD1Q9UJJ7 312 aaKnown RBP12.06□□□□□ -0.48
CLK4-201ENST00000316308 FOXH1O75593 365 aa12.05□□□□□ -0.48
CLK4-201ENST00000316308 PSMB3P49720 205 aa12.05□□□□□ -0.48
CLK4-201ENST00000316308 RPL31P62899 125 aaKnown RBP12.05□□□□□ -0.48
CLK4-201ENST00000316308 TMEM200BQ69YZ2 307 aa12.05□□□□□ -0.48
CLK4-201ENST00000316308 CDPF1Q6NVV7 123 aa12.05□□□□□ -0.48
CLK4-201ENST00000316308 SLC25A48Q6ZT89 311 aaKnown RBP12.05□□□□□ -0.48
CLK4-201ENST00000316308 ZNF114Q8NC26 417 aa12.05□□□□□ -0.48
CLK4-201ENST00000316308 FRZBQ92765 325 aa12.05□□□□□ -0.48
CLK4-201ENST00000316308 MRPL20Q9BYC9 149 aaKnown RBP12.05□□□□□ -0.48
CLK4-201ENST00000316308 SAP30LQ9HAJ7 183 aa12.05□□□□□ -0.48
CLK4-201ENST00000316308 SEBOXQ9HB31 216 aaPredicted RBP12.05□□□□□ -0.48
CLK4-201ENST00000316308 TMEM14BQ9NUH8 114 aa12.05□□□□□ -0.48
CLK4-201ENST00000316308 METTL1Q9UBP6 276 aaKnown RBP12.05□□□□□ -0.48
CLK4-201ENST00000316308 AP4M1O00189 453 aa12.05□□□□□ -0.48
CLK4-201ENST00000316308 ARL14EPLP0DKL9 152 aa12.05□□□□□ -0.48
CLK4-201ENST00000316308 IRF2P14316 349 aa12.05□□□□□ -0.48
CLK4-201ENST00000316308 TNFSF4P23510 183 aa12.05□□□□□ -0.48
CLK4-201ENST00000316308 OR13D1Q8NGV5 346 aa12.05□□□□□ -0.48
CLK4-201ENST00000316308 H1FXQ92522 213 aaKnown RBP12.05□□□□□ -0.48
CLK4-201ENST00000316308 PXMP4Q9Y6I8 212 aa12.05□□□□□ -0.48
CLK4-201ENST00000316308 IGKV1OR2-108A0A075B7D4 117 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 C11orf94C9JXX5 98 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 KBTBD11O94819 623 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 RAB7AP51149 207 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 PRSS8Q16651 343 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 DMRTC2Q8IXT2 367 aaPredicted RBP12.04□□□□□ -0.48
CLK4-201ENST00000316308 FAM210BQ96KR6 192 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 JKAMPQ9P055 326 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 RALYQ9UKM9 306 aaKnown RBP12.04□□□□□ -0.48
CLK4-201ENST00000316308 AKAP6Q13023 2319 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 E7EQL1 145 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 IFNA1P01562 189 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 IGFBP2P18065 325 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 GNB1P62873 340 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 CDSNQ15517 529 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 TMEM241Q24JQ0 296 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 CST9LP1Q5W188 147 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 C1QL4Q86Z23 238 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 SLC24A4Q8NFF2 622 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 RITA1Q96K30 269 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 OR51B2Q9Y5P1 312 aa12.04□□□□□ -0.48
CLK4-201ENST00000316308 ZNF729A6NN14 1252 aaPredicted RBP12.03□□□□□ -0.48
CLK4-201ENST00000316308 SHISA9B4DS77 424 aa12.03□□□□□ -0.48
CLK4-201ENST00000316308 CLDN34H7C241 214 aa12.03□□□□□ -0.48
CLK4-201ENST00000316308 IGHV3-48P01763 117 aa12.03□□□□□ -0.48
CLK4-201ENST00000316308 HSPE1P61604 102 aaKnown RBP12.03□□□□□ -0.48
CLK4-201ENST00000316308 CYP2G1PQ6ZSU1 146 aa12.03□□□□□ -0.48
CLK4-201ENST00000316308 OR52E5Q8NH55 327 aa12.03□□□□□ -0.48
CLK4-201ENST00000316308 SLC35D1Q9NTN3 355 aa12.03□□□□□ -0.48
CLK4-201ENST00000316308 LSM4Q9Y4Z0 139 aaKnown RBP12.03□□□□□ -0.48
CLK4-201ENST00000316308 C17orf112F2Z3M2 114 aa12.03□□□□□ -0.48
CLK4-201ENST00000316308 TMEM178BH3BS89 294 aa12.03□□□□□ -0.48
CLK4-201ENST00000316308 SAA1P0DJI8 122 aaPredicted RBP12.03□□□□□ -0.48
CLK4-201ENST00000316308 HNF1AP20823 631 aa12.03□□□□□ -0.48
CLK4-201ENST00000316308 NPY1RP25929 384 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms