RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 MSMO1Q15800 293 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 CMTM1Q8IZ96 169 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 SLC38A6Q8IZM9 456 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 ARRDC1Q8N5I2 433 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 COMMD1Q8N668 190 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 DLX4Q92988 240 aaPredicted RBP9.29□□□□□ -0.92
SCFD1-201ENST00000311943 TMEM230Q96A57 120 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 UBE2E2Q96LR5 201 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 PLEKHA2Q9HB19 425 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 ZNF580Q9UK33 172 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 ACTL6BO94805 426 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 IGKV1-5P01602 117 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 AKAIN1P0CW23 69 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 NQO2P16083 231 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 HLA-GP17693 338 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 RPL27AP46776 148 aaKnown RBP9.29□□□□□ -0.92
SCFD1-201ENST00000311943 TAS2R31P59538 309 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 RPL8P62917 257 aaKnown RBP9.29□□□□□ -0.92
SCFD1-201ENST00000311943 TMEM267Q0VDI3 215 aaPredicted RBP9.29□□□□□ -0.92
SCFD1-201ENST00000311943 MMD2Q8IY49 270 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 OR1N2Q8NGR9 330 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 SEC22AQ96IW7 307 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 HINT2Q9BX68 163 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 AKIP1Q9NQ31 210 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 ZC4H2Q9NQZ6 224 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 DNAH3Q8TD57 4116 aa9.29□□□□□ -0.92
SCFD1-201ENST00000311943 IGHV3-21A0A0B4J1V1 117 aa9.28□□□□□ -0.92
SCFD1-201ENST00000311943 TEX50A0A1B0GTY4 177 aa9.28□□□□□ -0.92
SCFD1-201ENST00000311943 RBFOX2O43251 390 aaKnown RBP eCLIP9.28□□□□□ -0.92
SCFD1-201ENST00000311943 HRASP01112 189 aa9.28□□□□□ -0.92
SCFD1-201ENST00000311943 S100A5P33763 92 aa9.28□□□□□ -0.92
SCFD1-201ENST00000311943 DCUN1D4Q92564 292 aa9.28□□□□□ -0.92
SCFD1-201ENST00000311943 FANCD2OSQ96PS1 177 aa9.28□□□□□ -0.92
SCFD1-201ENST00000311943 BET1LQ9NYM9 111 aa9.28□□□□□ -0.92
SCFD1-201ENST00000311943 C3orf85A0A1B0GTC6 90 aa9.27□□□□□ -0.92
SCFD1-201ENST00000311943 IGLC7A0M8Q6 106 aa9.27□□□□□ -0.92
SCFD1-201ENST00000311943 A6NHS1 94 aa9.27□□□□□ -0.92
SCFD1-201ENST00000311943 TPPPO94811 219 aa9.27□□□□□ -0.92
SCFD1-201ENST00000311943 NDUFB8O95169 186 aa9.27□□□□□ -0.92
SCFD1-201ENST00000311943 OR5AC1P0C628 307 aa9.27□□□□□ -0.92
SCFD1-201ENST00000311943 MFAP2P55001 183 aa9.27□□□□□ -0.92
SCFD1-201ENST00000311943 MRPS10P82664 201 aaKnown RBP9.27□□□□□ -0.92
SCFD1-201ENST00000311943 WT1-ASQ06250 92 aa9.27□□□□□ -0.92
SCFD1-201ENST00000311943 FHL3Q13643 280 aa9.27□□□□□ -0.92
SCFD1-201ENST00000311943 POU2AF1Q16633 256 aa9.27□□□□□ -0.92
SCFD1-201ENST00000311943 Q6ZRM9 215 aa9.27□□□□□ -0.92
SCFD1-201ENST00000311943 OR5M8Q8NGP6 311 aa9.27□□□□□ -0.92
SCFD1-201ENST00000311943 GPR132Q9UNW8 380 aa9.27□□□□□ -0.92
SCFD1-201ENST00000311943 NXPH3O95157 252 aa9.27□□□□□ -0.93
SCFD1-201ENST00000311943 MYCNOSP40205 109 aa9.27□□□□□ -0.93
SCFD1-201ENST00000311943 KIR2DS2P43631 304 aa9.27□□□□□ -0.93
SCFD1-201ENST00000311943 CCR6P51684 374 aa9.27□□□□□ -0.93
SCFD1-201ENST00000311943 RHOGP84095 191 aa9.27□□□□□ -0.93
SCFD1-201ENST00000311943 CNPY1Q3B7I2 92 aa9.27□□□□□ -0.93
SCFD1-201ENST00000311943 LGALS1P09382 135 aaKnown RBP9.26□□□□□ -0.93
SCFD1-201ENST00000311943 ETV6P41212 452 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 MEF2DQ14814 521 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 GLYATL2Q8WU03 294 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 C15orf40Q8WUR7 153 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 QTRT1Q9BXR0 403 aaKnown RBP9.26□□□□□ -0.93
SCFD1-201ENST00000311943 FLVCR2Q9UPI3 526 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 TGP01266 2768 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 MFSD2BA6NFX1 497 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 DISC1C4P0D8 188 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 PPP5D1E7EU14 171 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 IGHV3-48P01763 117 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 CTSDP07339 412 aaPredicted RBP9.26□□□□□ -0.93
SCFD1-201ENST00000311943 AKR1C4P17516 323 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 TBPP20226 339 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 SUPT4H1P63272 117 aaKnown RBP9.26□□□□□ -0.93
SCFD1-201ENST00000311943 ZNF616Q08AN1 781 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 LPCAT3Q6P1A2 487 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 TOMM5Q8N4H5 51 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 TTC9CQ8N5M4 171 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 TCTEX1D1Q8N7M0 179 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 VSTM2AQ8TAG5 236 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 SPIN2AQ99865 258 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 SPIN2BQ9BPZ2 258 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 COPZ2Q9P299 210 aa9.26□□□□□ -0.93
SCFD1-201ENST00000311943 A0A0B4J293 547 aa9.25□□□□□ -0.93
SCFD1-201ENST00000311943 CTRB1P17538 263 aa9.25□□□□□ -0.93
SCFD1-201ENST00000311943 PSMB6P28072 239 aa9.25□□□□□ -0.93
SCFD1-201ENST00000311943 RND3P61587 244 aa9.25□□□□□ -0.93
SCFD1-201ENST00000311943 ZNF57Q68EA5 555 aaPredicted RBP9.25□□□□□ -0.93
SCFD1-201ENST00000311943 CTRB2Q6GPI1 263 aa9.25□□□□□ -0.93
SCFD1-201ENST00000311943 TMED4Q7Z7H5 227 aa9.25□□□□□ -0.93
SCFD1-201ENST00000311943 FAM219AQ8IW50 185 aa9.25□□□□□ -0.93
SCFD1-201ENST00000311943 COMMD9Q9P000 198 aa9.25□□□□□ -0.93
SCFD1-201ENST00000311943 OR51B2Q9Y5P1 312 aa9.25□□□□□ -0.93
SCFD1-201ENST00000311943 TRBV9A0A0B4J1U6 114 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 IGHV3-35A0A0C4DH35 117 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 WI2-2373I1.2A0A1W2PRP0 233 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 H0Y980 276 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 SERPINE2P07093 398 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 OR13C7P0DN81 318 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 SSBP1Q04837 148 aaKnown RBP9.24□□□□□ -0.93
SCFD1-201ENST00000311943 TRIM16LQ309B1 348 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 C15orf32Q32M92 178 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 SPANXN2Q5MJ10 180 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 CD300LFQ8TDQ1 290 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms