RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 ATOH7Q8N100 152 aa11.32□□□□□ -0.6
NPAS4-201ENST00000311034 OR5AU1Q8NGC0 362 aa11.32□□□□□ -0.6
NPAS4-201ENST00000311034 R3HDM4Q96D70 268 aa11.32□□□□□ -0.6
NPAS4-201ENST00000311034 C5orf30Q96GV9 206 aa11.32□□□□□ -0.6
NPAS4-201ENST00000311034 FAM173AQ9BQD7 235 aa11.32□□□□□ -0.6
NPAS4-201ENST00000311034 LRFN3Q9BTN0 628 aa11.32□□□□□ -0.6
NPAS4-201ENST00000311034 LINC00473A8K010 186 aa11.32□□□□□ -0.6
NPAS4-201ENST00000311034 NEURL1O76050 574 aa11.32□□□□□ -0.6
NPAS4-201ENST00000311034 GPR12P47775 334 aa11.32□□□□□ -0.6
NPAS4-201ENST00000311034 GFRA1P56159 465 aa11.32□□□□□ -0.6
NPAS4-201ENST00000311034 RPL15P61313 204 aaKnown RBP11.32□□□□□ -0.6
NPAS4-201ENST00000311034 LCN2P80188 198 aa11.32□□□□□ -0.6
NPAS4-201ENST00000311034 TMEM183BQ1AE95 376 aa11.32□□□□□ -0.6
NPAS4-201ENST00000311034 ARSJQ5FYB0 599 aaPredicted RBP11.32□□□□□ -0.6
NPAS4-201ENST00000311034 SIGLECL1Q8N7X8 197 aa11.32□□□□□ -0.6
NPAS4-201ENST00000311034 CIB3Q96Q77 187 aaPredicted RBP11.32□□□□□ -0.6
NPAS4-201ENST00000311034 FAM90A26D6RGX4 464 aa11.31□□□□□ -0.6
NPAS4-201ENST00000311034 CD46P15529 392 aa11.31□□□□□ -0.6
NPAS4-201ENST00000311034 OR8I2Q8N0Y5 310 aa11.31□□□□□ -0.6
NPAS4-201ENST00000311034 RBM14Q96PK6 669 aaKnown RBP11.31□□□□□ -0.6
NPAS4-201ENST00000311034 NAT8BQ9UHF3 227 aa11.31□□□□□ -0.6
NPAS4-201ENST00000311034 CSMD1Q96PZ7 3565 aa11.31□□□□□ -0.6
NPAS4-201ENST00000311034 TCF21O43680 179 aa11.31□□□□□ -0.6
NPAS4-201ENST00000311034 OR7C2O60412 319 aa11.31□□□□□ -0.6
NPAS4-201ENST00000311034 SPATA31B1PQ5VZV4 182 aa11.31□□□□□ -0.6
NPAS4-201ENST00000311034 M0R1B8 84 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 OR9G9P0C7N8 305 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 RPL31P62899 125 aaKnown RBP11.3□□□□□ -0.6
NPAS4-201ENST00000311034 LYG1Q8N1E2 194 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 TXN2Q99757 166 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 PLEKHA3Q9HB20 300 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 ENY2Q9NPA8 101 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 CSPG4Q6UVK1 2322 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 RRHO14718 337 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 RAB4AP20338 218 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 AMTP48728 403 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 LHX2P50458 406 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 SSPNQ14714 243 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 C1orf210Q8IVY1 113 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 LRRC29Q8WV35 223 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 TRBV6-6A0A0A6YYG2 114 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 DLEU1O43261 78 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 TYMSP04818 313 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 ACSF3Q4G176 576 aaPredicted RBP11.3□□□□□ -0.6
NPAS4-201ENST00000311034 MRPL54Q6P161 138 aaKnown RBP11.3□□□□□ -0.6
NPAS4-201ENST00000311034 OR4P4Q8NGL7 312 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 FAM216AQ8WUB2 273 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 PKIBQ9C010 78 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 OPN3Q9H1Y3 402 aaPredicted RBP11.3□□□□□ -0.6
NPAS4-201ENST00000311034 MS4A5Q9H3V2 200 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 PTPN13Q12923 2485 aa11.3□□□□□ -0.6
NPAS4-201ENST00000311034 ASH1LQ9NR48 2969 aaKnown RBP11.29□□□□□ -0.6
NPAS4-201ENST00000311034 C15orf62A8K5M9 175 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 A8MXE2 369 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 KLRC4-KLRK1H3BQV0 150 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 PSG7Q13046 419 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 KRTCAP3Q53RY4 240 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 VWA1Q6PCB0 445 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 DOLPP1Q86YN1 238 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 KCNIP2Q9NS61 270 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 CUBNO60494 3623 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 NAV3Q8IVL0 2385 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 TMEM210A6NLX4 147 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 SPINT2O43291 252 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 FOXH1O75593 365 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 CLDN14O95500 239 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 TIMP3P35625 211 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 CLDN18P56856 261 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 RNFT1Q5M7Z0 435 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 TMEM45BQ96B21 275 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 YTHDF2Q9Y5A9 579 aaKnown RBP11.29□□□□□ -0.6
NPAS4-201ENST00000311034 SPAARA0A1B0GVQ0 90 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 PMS2P5A8MQ11 134 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 MLNRO43193 412 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 DEFB109BQ30KR1 87 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 ERASQ7Z444 233 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 C11orf42Q8N5U0 333 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 OR13A1Q8NGR1 328 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 NANOS1Q8WY41 292 aaKnown RBP11.29□□□□□ -0.6
NPAS4-201ENST00000311034 H1FXQ92522 213 aaKnown RBP11.29□□□□□ -0.6
NPAS4-201ENST00000311034 UHRF2Q96PU4 802 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 WNT10AQ9GZT5 417 aa11.29□□□□□ -0.6
NPAS4-201ENST00000311034 KIR2DL5BA0A0G2JN68 375 aa11.28□□□□□ -0.6
NPAS4-201ENST00000311034 KIR2DL5BA0A0G2JPC4 375 aa11.28□□□□□ -0.6
NPAS4-201ENST00000311034 LNP1A1A4G5 178 aa11.28□□□□□ -0.6
NPAS4-201ENST00000311034 C9orf172C9J069 976 aa11.28□□□□□ -0.6
NPAS4-201ENST00000311034 DIRC3C9JPN6 131 aa11.28□□□□□ -0.6
NPAS4-201ENST00000311034 ENSAO43768 121 aaKnown RBP11.28□□□□□ -0.6
NPAS4-201ENST00000311034 ERVK-16P61578 105 aa11.28□□□□□ -0.6
NPAS4-201ENST00000311034 ZNF766Q5HY98 468 aa11.28□□□□□ -0.6
NPAS4-201ENST00000311034 KIR2DL5AQ8N109 375 aa11.28□□□□□ -0.6
NPAS4-201ENST00000311034 ST6GALNAC3Q8NDV1 305 aa11.28□□□□□ -0.6
NPAS4-201ENST00000311034 TAAR6Q96RI8 345 aa11.28□□□□□ -0.6
NPAS4-201ENST00000311034 TRAV3A0A0B4J244 114 aa11.28□□□□□ -0.6
NPAS4-201ENST00000311034 MMDQ15546 238 aa11.28□□□□□ -0.6
NPAS4-201ENST00000311034 MLANAQ16655 118 aa11.28□□□□□ -0.6
NPAS4-201ENST00000311034 CENPVQ7Z7K6 275 aaPredicted RBP11.28□□□□□ -0.6
NPAS4-201ENST00000311034 FAM19A2Q8N3H0 131 aa11.28□□□□□ -0.6
NPAS4-201ENST00000311034 MIEN1Q9BRT3 115 aa11.28□□□□□ -0.6
NPAS4-201ENST00000311034 ZNF703Q9H7S9 590 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms