RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 LIN7CQ9NUP9 197 aaKnown RBP8.62□□□□□ -1.03
APOBEC3F-201ENST00000308521 TRAV24A0A0B4J272 114 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 HSPB6O14558 160 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 IGKV1D-33P01593 117 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 IGKV1-33P01594 117 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 CA6P23280 308 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 TBC1D28Q2M2D7 210 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 ZNF585BQ52M93 769 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 KRTCAP3Q53RY4 240 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 GFRALQ6UXV0 394 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 MOB1BQ7L9L4 216 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 KLHDC1Q8N7A1 406 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 FAM57AQ8TBR7 257 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 CST9LQ9H4G1 147 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 SYNGR1O43759 233 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 TUBG1P23258 451 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 FAM27E3Q08E93 113 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 TESK1Q15569 626 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 SPANXN5Q5MJ07 72 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 C22orf34Q6ZV56 151 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 NECAP1Q8NC96 275 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 CMTM2Q8TAZ6 248 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 TMEM37Q8WXS4 190 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 CACNA1AO00555 2505 aa8.61□□□□□ -1.03
APOBEC3F-201ENST00000308521 UBE2L5PA0A1B0GUS4 154 aa8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 GYPAP02724 150 aa8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 COX5AP20674 150 aa8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 CTRLP40313 264 aa8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 GNB2P62879 340 aa8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 ACSM6Q6P461 480 aa8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 OR5P3Q8WZ94 311 aa8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 ACACBO00763 2458 aa8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 PKD1L2Q7Z442 2459 aa8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 SMPD2O60906 423 aa8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 CD99P14209 185 aa8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 VHLLQ6RSH7 139 aa8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 BHLHA15Q7RTS1 189 aaPredicted RBP8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 FAM58AQ8N1B3 248 aa8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 SLC25A40Q8TBP6 338 aa8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 NEIL1Q96FI4 390 aaPredicted RBP8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 ZNF488Q96MN9 340 aa8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 TMEM147Q9BVK8 224 aa8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 ZNF430Q9H8G1 570 aaPredicted RBP8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 OR1A1Q9P1Q5 309 aa8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 RBM7Q9Y580 266 aaKnown RBP8.6□□□□□ -1.03
APOBEC3F-201ENST00000308521 PRRG2O14669 202 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 HS3ST1O14792 307 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 CECR9P0C854 216 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 SCGB1A1P11684 91 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 HNRNPA3P51991 378 aaKnown RBP8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 PPP1CBP62140 327 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 HOXA4Q00056 320 aaPredicted RBP8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 MMDQ15546 238 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 OR4F5Q8NH21 305 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 OR4F4Q96R69 305 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 PKIBQ9C010 78 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 SLC35D1Q9NTN3 355 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 IL19Q9UHD0 177 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 PAM16Q9Y3D7 125 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 PKDREJQ9NTG1 2253 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 OR5B21A6NL26 309 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 MPV17P39210 176 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 FABP6P51161 128 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 ZNF83P51522 516 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 RPL15P61313 204 aaKnown RBP8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 PRSS57Q6UWY2 283 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 OR10G9Q8NGN4 311 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 OR10G7Q8NGN6 311 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 RDH5Q92781 318 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 PPP1R3CQ9UQK1 317 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 MPC1Q9Y5U8 109 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 PXMP4Q9Y6I8 212 aa8.59□□□□□ -1.03
APOBEC3F-201ENST00000308521 IGHV1-69-2A0A0G2JMI3 117 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 A0A0G2JNJ9 132 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 MLNRO43193 412 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 TOX4O94842 621 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 IGKV3-15P01624 115 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 Q6P435 159 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 C1orf174Q8IYL3 243 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 FGFRL1Q8N441 504 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 Q9UFV3 132 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 SPTBN1Q01082 2364 aaKnown RBP8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 CHD3Q12873 2000 aaKnown RBP8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 IGHV1-18A0A0C4DH31 117 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 ANKRD30BLA7E2S9 258 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 TIMP3P35625 211 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 SUMO1P63165 101 aaKnown RBP8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 GNG3P63215 75 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 PSG7Q13046 419 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 MRPL49Q13405 166 aaKnown RBP8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 MSMO1Q15800 293 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 TMEM249Q2WGJ8 235 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 Q6ZWC4 215 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 ZBTB34Q8NCN2 500 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 SLC25A22Q9H936 323 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 LRBAP50851 2863 aa8.58□□□□□ -1.04
APOBEC3F-201ENST00000308521 PMS2P5A8MQ11 134 aa8.57□□□□□ -1.04
APOBEC3F-201ENST00000308521 TMPRSS2O15393 492 aa8.57□□□□□ -1.04
APOBEC3F-201ENST00000308521 RHBDL1O75783 438 aa8.57□□□□□ -1.04
APOBEC3F-201ENST00000308521 CLDN1O95832 211 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms